RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
UBE2D3-209ENST00000394804 PANO1I0J062 215 aa7.07□□□□□ -1.28
UBE2D3-209ENST00000394804 Q5VV11 94 aa7.07□□□□□ -1.28
UBE2D3-209ENST00000394804 CD164Q04900 197 aa7.06□□□□□ -1.28
UBE2D3-209ENST00000394804 WWC2-AS2Q96NR7 200 aa7.05□□□□□ -1.28
UBE2D3-209ENST00000394804 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
UBE2D3-209ENST00000394804 Q75L30 129 aa7.04□□□□□ -1.28
UBE2D3-209ENST00000394804 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
UBE2D3-209ENST00000394804 C7orf65Q6ZTY9 151 aa7.03□□□□□ -1.28
UBE2D3-209ENST00000394804 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
UBE2D3-209ENST00000394804 SPINK1P00995 79 aa7.02□□□□□ -1.29
UBE2D3-209ENST00000394804 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
UBE2D3-209ENST00000394804 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
UBE2D3-209ENST00000394804 Q6ZR54 194 aa6.99□□□□□ -1.29
UBE2D3-209ENST00000394804 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
UBE2D3-209ENST00000394804 TYMSOSQ8TAI1 123 aa6.99□□□□□ -1.29
UBE2D3-209ENST00000394804 HRES1P13985 223 aa6.99□□□□□ -1.29
UBE2D3-209ENST00000394804 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
UBE2D3-209ENST00000394804 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
UBE2D3-209ENST00000394804 Q6ZRN7 208 aaPredicted RBP6.98□□□□□ -1.29
UBE2D3-209ENST00000394804 Q96NJ1 140 aa6.96□□□□□ -1.3
UBE2D3-209ENST00000394804 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
UBE2D3-209ENST00000394804 UQCR11O14957 56 aa6.92□□□□□ -1.3
UBE2D3-209ENST00000394804 A0A087X002 238 aa6.9□□□□□ -1.3
UBE2D3-209ENST00000394804 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.3
UBE2D3-209ENST00000394804 K7ERS5 55 aa6.89□□□□□ -1.31
UBE2D3-209ENST00000394804 Q5W150 140 aa6.89□□□□□ -1.31
UBE2D3-209ENST00000394804 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
UBE2D3-209ENST00000394804 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
UBE2D3-209ENST00000394804 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
UBE2D3-209ENST00000394804 SPINK7P58062 85 aa6.87□□□□□ -1.31
UBE2D3-209ENST00000394804 LINC00304Q8N9R0 145 aa6.85□□□□□ -1.31
UBE2D3-209ENST00000394804 LCA10Q71F78 164 aa6.85□□□□□ -1.31
UBE2D3-209ENST00000394804 LYSTQ99698 3801 aa6.85□□□□□ -1.31
UBE2D3-209ENST00000394804 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-209ENST00000394804 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
UBE2D3-209ENST00000394804 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
UBE2D3-209ENST00000394804 A8MU10 97 aa6.81□□□□□ -1.32
UBE2D3-209ENST00000394804 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
UBE2D3-209ENST00000394804 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
UBE2D3-209ENST00000394804 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
UBE2D3-209ENST00000394804 Q8N1X5 172 aa6.79□□□□□ -1.32
UBE2D3-209ENST00000394804 KMT2CQ8NEZ4 4911 aaKnown RBP6.75□□□□□ -1.33
UBE2D3-209ENST00000394804 C9orf92A6NGG3 77 aa6.75□□□□□ -1.33
UBE2D3-209ENST00000394804 KRTAP10-1P60331 282 aa6.74□□□□□ -1.33
UBE2D3-209ENST00000394804 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-209ENST00000394804 KMT2AQ03164 3969 aa6.71□□□□□ -1.34
UBE2D3-209ENST00000394804 A6NN06 94 aa6.71□□□□□ -1.34
UBE2D3-209ENST00000394804 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
UBE2D3-209ENST00000394804 KRTAP13-2Q52LG2 175 aa6.68□□□□□ -1.34
UBE2D3-209ENST00000394804 DYNC2H1Q8NCM8 4307 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-209ENST00000394804 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
UBE2D3-209ENST00000394804 PRAC1Q96KF2 57 aa6.65□□□□□ -1.34
UBE2D3-209ENST00000394804 SRRM2Q9UQ35 2752 aaKnown RBP6.64□□□□□ -1.35
UBE2D3-209ENST00000394804 DNAH1Q9P2D7 4330 aa6.63□□□□□ -1.35
UBE2D3-209ENST00000394804 VPS13DQ5THJ4 4388 aa6.63□□□□□ -1.35
UBE2D3-209ENST00000394804 RYR3Q15413 4870 aa6.62□□□□□ -1.35
UBE2D3-209ENST00000394804 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
UBE2D3-209ENST00000394804 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
UBE2D3-209ENST00000394804 RYR2Q92736 4967 aa6.6□□□□□ -1.35
UBE2D3-209ENST00000394804 A0A1B0GU33 70 aa6.59□□□□□ -1.35
UBE2D3-209ENST00000394804 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
UBE2D3-209ENST00000394804 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
UBE2D3-209ENST00000394804 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
UBE2D3-209ENST00000394804 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
UBE2D3-209ENST00000394804 Q6ZSA8 131 aa6.54□□□□□ -1.36
UBE2D3-209ENST00000394804 FRAS1Q86XX4 4008 aa6.53□□□□□ -1.36
UBE2D3-209ENST00000394804 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-209ENST00000394804 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
UBE2D3-209ENST00000394804 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
UBE2D3-209ENST00000394804 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
UBE2D3-209ENST00000394804 KRTAP16-1A8MUX0 517 aa6.49□□□□□ -1.37
UBE2D3-209ENST00000394804 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
UBE2D3-209ENST00000394804 DNAH17Q9UFH2 4485 aa6.44□□□□□ -1.38
UBE2D3-209ENST00000394804 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
UBE2D3-209ENST00000394804 FAT2Q9NYQ8 4349 aa6.42□□□□□ -1.38
UBE2D3-209ENST00000394804 DNAH6Q9C0G6 4158 aa6.42□□□□□ -1.38
UBE2D3-209ENST00000394804 A0A0D9SG42 100 aa6.42□□□□□ -1.38
UBE2D3-209ENST00000394804 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
UBE2D3-209ENST00000394804 EPPK1P58107 5090 aaKnown RBP6.41□□□□□ -1.38
UBE2D3-209ENST00000394804 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
UBE2D3-209ENST00000394804 A8MUU9 505 aa6.38□□□□□ -1.39
UBE2D3-209ENST00000394804 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
UBE2D3-209ENST00000394804 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
UBE2D3-209ENST00000394804 A0A1B0GVY2 172 aa6.36□□□□□ -1.39
UBE2D3-209ENST00000394804 PKD1P98161 4303 aa6.35□□□□□ -1.39
UBE2D3-209ENST00000394804 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
UBE2D3-209ENST00000394804 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
UBE2D3-209ENST00000394804 S4R3F8 94 aa6.33□□□□□ -1.4
UBE2D3-209ENST00000394804 CRIPTQ9P021 101 aa6.32□□□□□ -1.4
UBE2D3-209ENST00000394804 HECTD4Q9Y4D8 3996 aa6.32□□□□□ -1.4
UBE2D3-209ENST00000394804 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-209ENST00000394804 LRP1BQ9NZR2 4599 aa6.31□□□□□ -1.4
UBE2D3-209ENST00000394804 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
UBE2D3-209ENST00000394804 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-209ENST00000394804 KIAA1109Q2LD37 5005 aa6.27□□□□□ -1.41
UBE2D3-209ENST00000394804 Q5VSD8 79 aa6.26□□□□□ -1.41
UBE2D3-209ENST00000394804 ROMO1P60602 79 aa6.26□□□□□ -1.41
UBE2D3-209ENST00000394804 H0YAA0 97 aa6.25□□□□□ -1.41
UBE2D3-209ENST00000394804 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms