RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 KRTAP1-4P0C5Y4 121 aa8.33□□□□□ -1.08
MKS1-203ENST00000393120 MRPL34Q9BQ48 92 aaKnown RBP8.33□□□□□ -1.08
MKS1-203ENST00000393120 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
MKS1-203ENST00000393120 C1orf64Q8NEQ6 169 aa8.32□□□□□ -1.08
MKS1-203ENST00000393120 FAT2Q9NYQ8 4349 aa8.32□□□□□ -1.08
MKS1-203ENST00000393120 SPANXA2-OT1Q8N9U9 137 aa8.3□□□□□ -1.08
MKS1-203ENST00000393120 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
MKS1-203ENST00000393120 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
MKS1-203ENST00000393120 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
MKS1-203ENST00000393120 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
MKS1-203ENST00000393120 NDUFS5O43920 106 aa8.25□□□□□ -1.09
MKS1-203ENST00000393120 C4orf26Q17RF5 130 aa8.24□□□□□ -1.09
MKS1-203ENST00000393120 C1orf195Q5TG92 126 aa8.24□□□□□ -1.09
MKS1-203ENST00000393120 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
MKS1-203ENST00000393120 PLA2G1BP04054 148 aaKnown RBP8.23□□□□□ -1.09
MKS1-203ENST00000393120 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
MKS1-203ENST00000393120 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
MKS1-203ENST00000393120 LINC00313P59037 77 aa8.19□□□□□ -1.1
MKS1-203ENST00000393120 PRR4Q16378 134 aa8.19□□□□□ -1.1
MKS1-203ENST00000393120 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
MKS1-203ENST00000393120 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
MKS1-203ENST00000393120 SPINK1P00995 79 aa8.18□□□□□ -1.1
MKS1-203ENST00000393120 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
MKS1-203ENST00000393120 SEC61GP60059 68 aa8.17□□□□□ -1.1
MKS1-203ENST00000393120 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
MKS1-203ENST00000393120 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
MKS1-203ENST00000393120 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
MKS1-203ENST00000393120 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.11
MKS1-203ENST00000393120 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.11
MKS1-203ENST00000393120 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
MKS1-203ENST00000393120 Q5W150 140 aa8.14□□□□□ -1.11
MKS1-203ENST00000393120 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
MKS1-203ENST00000393120 SPAG11AQ6PDA7 123 aa8.11□□□□□ -1.11
MKS1-203ENST00000393120 SACSQ9NZJ4 4579 aa8.11□□□□□ -1.11
MKS1-203ENST00000393120 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
MKS1-203ENST00000393120 Q1T7F1 81 aa8.11□□□□□ -1.11
MKS1-203ENST00000393120 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
MKS1-203ENST00000393120 SMR3BP02814 79 aaPredicted RBP8.1□□□□□ -1.11
MKS1-203ENST00000393120 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
MKS1-203ENST00000393120 V9GYY9 64 aa8.1□□□□□ -1.11
MKS1-203ENST00000393120 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
MKS1-203ENST00000393120 LINC00304Q8N9R0 145 aa8.09□□□□□ -1.11
MKS1-203ENST00000393120 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
MKS1-203ENST00000393120 PKHD1P08F94 4074 aa8.05□□□□□ -1.12
MKS1-203ENST00000393120 COA5Q86WW8 74 aa8.03□□□□□ -1.12
MKS1-203ENST00000393120 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
MKS1-203ENST00000393120 IGKV2-30P06310 120 aa7.99□□□□□ -1.13
MKS1-203ENST00000393120 RYR2Q92736 4967 aa7.97□□□□□ -1.13
MKS1-203ENST00000393120 HRES1P13985 223 aa7.96□□□□□ -1.13
MKS1-203ENST00000393120 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
MKS1-203ENST00000393120 DMAC1Q96GE9 116 aa7.91□□□□□ -1.14
MKS1-203ENST00000393120 APOBP04114 4563 aaKnown RBP7.91□□□□□ -1.14
MKS1-203ENST00000393120 ACYP2P14621 99 aa7.91□□□□□ -1.14
MKS1-203ENST00000393120 PSPHP1O15172 72 aa7.9□□□□□ -1.14
MKS1-203ENST00000393120 A8MUN3 132 aa7.88□□□□□ -1.15
MKS1-203ENST00000393120 IGKV2D-30A0A075B6S6 120 aa7.85□□□□□ -1.15
MKS1-203ENST00000393120 Q5VV11 94 aa7.85□□□□□ -1.15
MKS1-203ENST00000393120 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
MKS1-203ENST00000393120 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
MKS1-203ENST00000393120 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
MKS1-203ENST00000393120 A8MUU9 505 aa7.84□□□□□ -1.15
MKS1-203ENST00000393120 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
MKS1-203ENST00000393120 KMT2CQ8NEZ4 4911 aaKnown RBP7.83□□□□□ -1.16
MKS1-203ENST00000393120 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
MKS1-203ENST00000393120 FAT1Q14517 4588 aa7.81□□□□□ -1.16
MKS1-203ENST00000393120 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
MKS1-203ENST00000393120 C7orf65Q6ZTY9 151 aa7.8□□□□□ -1.16
MKS1-203ENST00000393120 Q75L30 129 aa7.8□□□□□ -1.16
MKS1-203ENST00000393120 Q5VSD8 79 aa7.79□□□□□ -1.16
MKS1-203ENST00000393120 C9orf92A6NGG3 77 aa7.78□□□□□ -1.16
MKS1-203ENST00000393120 CHKB-CPT1BH3BT56 60 aa7.77□□□□□ -1.17
MKS1-203ENST00000393120 Q8N1X5 172 aa7.77□□□□□ -1.17
MKS1-203ENST00000393120 PMAIP1Q13794 54 aa7.74□□□□□ -1.17
MKS1-203ENST00000393120 FLG2Q5D862 2391 aaPredicted RBP7.72□□□□□ -1.17
MKS1-203ENST00000393120 A6NED7 52 aa7.65□□□□□ -1.18
MKS1-203ENST00000393120 KRTAP17-1Q9BYP8 105 aa7.65□□□□□ -1.18
MKS1-203ENST00000393120 SPINK7P58062 85 aa7.64□□□□□ -1.19
MKS1-203ENST00000393120 HSPG2P98160 4391 aa7.64□□□□□ -1.19
MKS1-203ENST00000393120 LCA10Q71F78 164 aa7.62□□□□□ -1.19
MKS1-203ENST00000393120 RYR1P21817 5038 aa7.61□□□□□ -1.19
MKS1-203ENST00000393120 CDC42SE1Q9NRR8 79 aa7.6□□□□□ -1.19
MKS1-203ENST00000393120 TNXBP22105 4242 aa7.6□□□□□ -1.19
MKS1-203ENST00000393120 RYR3Q15413 4870 aa7.6□□□□□ -1.19
MKS1-203ENST00000393120 A0A1B0GU69 56 aa7.58□□□□□ -1.2
MKS1-203ENST00000393120 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
MKS1-203ENST00000393120 A8MU10 97 aa7.58□□□□□ -1.2
MKS1-203ENST00000393120 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
MKS1-203ENST00000393120 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
MKS1-203ENST00000393120 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
MKS1-203ENST00000393120 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
MKS1-203ENST00000393120 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
MKS1-203ENST00000393120 XP32Q5T750 250 aa7.52□□□□□ -1.21
MKS1-203ENST00000393120 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
MKS1-203ENST00000393120 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
MKS1-203ENST00000393120 DMBT1Q9UGM3 2413 aaPredicted RBP7.48□□□□□ -1.21
MKS1-203ENST00000393120 KIAA1109Q2LD37 5005 aa7.46□□□□□ -1.22
MKS1-203ENST00000393120 UQCR11O14957 56 aa7.44□□□□□ -1.22
MKS1-203ENST00000393120 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
MKS1-203ENST00000393120 KTN1-AS1Q86SY8 53 aa7.4□□□□□ -1.23
MKS1-203ENST00000393120 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms