RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 WWC2-AS2Q96NR7 200 aa6.82□□□□□ -1.32
PDCD4-202ENST00000393104 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
PDCD4-202ENST00000393104 PKD1P98161 4303 aa6.81□□□□□ -1.32
PDCD4-202ENST00000393104 FAT2Q9NYQ8 4349 aa6.81□□□□□ -1.32
PDCD4-202ENST00000393104 SPINK7P58062 85 aa6.8□□□□□ -1.32
PDCD4-202ENST00000393104 MGAM2Q2M2H8 2515 aa6.8□□□□□ -1.32
PDCD4-202ENST00000393104 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
PDCD4-202ENST00000393104 KTN1-AS1Q86SY8 53 aa6.79□□□□□ -1.32
PDCD4-202ENST00000393104 ATP11AUNQ6ZP68 121 aa6.78□□□□□ -1.32
PDCD4-202ENST00000393104 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
PDCD4-202ENST00000393104 Q5W150 140 aa6.78□□□□□ -1.32
PDCD4-202ENST00000393104 LRP1BQ9NZR2 4599 aa6.77□□□□□ -1.33
PDCD4-202ENST00000393104 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
PDCD4-202ENST00000393104 RBM12B-AS1Q9P1G2 102 aa6.77□□□□□ -1.33
PDCD4-202ENST00000393104 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
PDCD4-202ENST00000393104 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
PDCD4-202ENST00000393104 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
PDCD4-202ENST00000393104 VPS13BQ7Z7G8 4022 aa6.73□□□□□ -1.33
PDCD4-202ENST00000393104 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
PDCD4-202ENST00000393104 ANAPC11Q9NYG5 84 aa6.71□□□□□ -1.34
PDCD4-202ENST00000393104 A6NED7 52 aa6.7□□□□□ -1.34
PDCD4-202ENST00000393104 SPTSSBQ8NFR3 76 aa6.7□□□□□ -1.34
PDCD4-202ENST00000393104 TP53AIP1Q9HCN2 124 aa6.7□□□□□ -1.34
PDCD4-202ENST00000393104 SPACA4Q8TDM5 124 aa6.7□□□□□ -1.34
PDCD4-202ENST00000393104 IGLV9-49A0A0B4J1Y8 123 aa6.69□□□□□ -1.34
PDCD4-202ENST00000393104 A0A087WTM6 91 aa6.68□□□□□ -1.34
PDCD4-202ENST00000393104 PRR26Q8N8Z3 221 aa6.68□□□□□ -1.34
PDCD4-202ENST00000393104 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
PDCD4-202ENST00000393104 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
PDCD4-202ENST00000393104 C1orf134Q5TEV5 83 aa6.65□□□□□ -1.34
PDCD4-202ENST00000393104 HYDINQ4G0P3 5121 aa6.65□□□□□ -1.34
PDCD4-202ENST00000393104 TGP01266 2768 aa6.64□□□□□ -1.35
PDCD4-202ENST00000393104 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
PDCD4-202ENST00000393104 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
PDCD4-202ENST00000393104 PSORS1C2Q9UIG4 136 aa6.61□□□□□ -1.35
PDCD4-202ENST00000393104 NDUFS5O43920 106 aa6.6□□□□□ -1.35
PDCD4-202ENST00000393104 LY6G6CO95867 125 aa6.6□□□□□ -1.35
PDCD4-202ENST00000393104 IGLV5-52A0A0A0MRZ9 124 aa6.59□□□□□ -1.35
PDCD4-202ENST00000393104 RTL8CO15255 209 aa6.58□□□□□ -1.36
PDCD4-202ENST00000393104 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
PDCD4-202ENST00000393104 PKHD1P08F94 4074 aa6.56□□□□□ -1.36
PDCD4-202ENST00000393104 LINC00313P59037 77 aa6.56□□□□□ -1.36
PDCD4-202ENST00000393104 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
PDCD4-202ENST00000393104 KRTAP16-1A8MUX0 517 aa6.55□□□□□ -1.36
PDCD4-202ENST00000393104 Q6ZSA8 131 aa6.53□□□□□ -1.36
PDCD4-202ENST00000393104 ZNF861PO60384 105 aa6.52□□□□□ -1.37
PDCD4-202ENST00000393104 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
PDCD4-202ENST00000393104 SPATA8Q6RVD6 105 aa6.5□□□□□ -1.37
PDCD4-202ENST00000393104 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
PDCD4-202ENST00000393104 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
PDCD4-202ENST00000393104 A0A1B0GVY2 172 aa6.46□□□□□ -1.38
PDCD4-202ENST00000393104 IGKV2-30P06310 120 aa6.46□□□□□ -1.38
PDCD4-202ENST00000393104 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
PDCD4-202ENST00000393104 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
PDCD4-202ENST00000393104 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.38
PDCD4-202ENST00000393104 ACYP2P14621 99 aa6.45□□□□□ -1.38
PDCD4-202ENST00000393104 KRTAP10-2P60368 255 aa6.45□□□□□ -1.38
PDCD4-202ENST00000393104 ZNF706Q9Y5V0 76 aaPredicted RBP6.44□□□□□ -1.38
PDCD4-202ENST00000393104 IGLV7-43P04211 117 aa6.42□□□□□ -1.38
PDCD4-202ENST00000393104 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
PDCD4-202ENST00000393104 RYR2Q92736 4967 aa6.4□□□□□ -1.38
PDCD4-202ENST00000393104 KRTAP10-1P60331 282 aa6.4□□□□□ -1.39
PDCD4-202ENST00000393104 CIRBP-AS1Q8TBR5 109 aa6.4□□□□□ -1.39
PDCD4-202ENST00000393104 CDK2AP2O75956 126 aa6.39□□□□□ -1.39
PDCD4-202ENST00000393104 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
PDCD4-202ENST00000393104 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
PDCD4-202ENST00000393104 A0A1B0GU69 56 aa6.36□□□□□ -1.39
PDCD4-202ENST00000393104 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
PDCD4-202ENST00000393104 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
PDCD4-202ENST00000393104 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
PDCD4-202ENST00000393104 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
PDCD4-202ENST00000393104 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
PDCD4-202ENST00000393104 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
PDCD4-202ENST00000393104 H0YAA0 97 aa6.28□□□□□ -1.4
PDCD4-202ENST00000393104 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
PDCD4-202ENST00000393104 FAT1Q14517 4588 aa6.28□□□□□ -1.4
PDCD4-202ENST00000393104 UQCR11O14957 56 aa6.27□□□□□ -1.41
PDCD4-202ENST00000393104 HSPG2P98160 4391 aa6.27□□□□□ -1.41
PDCD4-202ENST00000393104 CSAG1Q6PB30 78 aa6.27□□□□□ -1.41
PDCD4-202ENST00000393104 TNXBP22105 4242 aa6.24□□□□□ -1.41
PDCD4-202ENST00000393104 KRTAP10-4P60372 401 aaPredicted RBP6.23□□□□□ -1.41
PDCD4-202ENST00000393104 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
PDCD4-202ENST00000393104 A8MUU9 505 aa6.22□□□□□ -1.41
PDCD4-202ENST00000393104 Q8N1X5 172 aa6.2□□□□□ -1.42
PDCD4-202ENST00000393104 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
PDCD4-202ENST00000393104 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
PDCD4-202ENST00000393104 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
PDCD4-202ENST00000393104 C4orf48Q5BLP8 95 aa6.16□□□□□ -1.42
PDCD4-202ENST00000393104 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
PDCD4-202ENST00000393104 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
PDCD4-202ENST00000393104 SPINK1P00995 79 aa6.12□□□□□ -1.43
PDCD4-202ENST00000393104 RYR3Q15413 4870 aa6.09□□□□□ -1.43
PDCD4-202ENST00000393104 LPAP08519 4548 aa6.07□□□□□ -1.44
PDCD4-202ENST00000393104 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
PDCD4-202ENST00000393104 FLG2Q5D862 2391 aaPredicted RBP6.05□□□□□ -1.44
PDCD4-202ENST00000393104 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
PDCD4-202ENST00000393104 H3BS24 57 aa6.04□□□□□ -1.44
PDCD4-202ENST00000393104 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
PDCD4-202ENST00000393104 RYR1P21817 5038 aa6.03□□□□□ -1.44
PDCD4-202ENST00000393104 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms