RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 C8orf17Q9NRJ1 99 aa11.7□□□□□ -0.54
PTPN11-202ENST00000392597 FAM236DA0A1B0GTK5 79 aa11.68□□□□□ -0.54
PTPN11-202ENST00000392597 FAM236CP0DP71 79 aa11.68□□□□□ -0.54
PTPN11-202ENST00000392597 RPS28P62857 69 aaKnown RBP11.67□□□□□ -0.54
PTPN11-202ENST00000392597 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
PTPN11-202ENST00000392597 ZCCHC13Q8WW36 166 aaKnown RBP11.66□□□□□ -0.54
PTPN11-202ENST00000392597 PLA2G1BP04054 148 aaKnown RBP11.65□□□□□ -0.54
PTPN11-202ENST00000392597 ATP5EP56381 51 aaPredicted RBP11.63□□□□□ -0.55
PTPN11-202ENST00000392597 FAT1Q14517 4588 aa11.63□□□□□ -0.55
PTPN11-202ENST00000392597 MP68P56378 58 aa11.63□□□□□ -0.55
PTPN11-202ENST00000392597 H3BPC8 53 aa11.61□□□□□ -0.55
PTPN11-202ENST00000392597 TP53AIP1Q9HCN2 124 aa11.6□□□□□ -0.55
PTPN11-202ENST00000392597 LIMD2Q9BT23 127 aa11.59□□□□□ -0.55
PTPN11-202ENST00000392597 SMR3BP02814 79 aaPredicted RBP11.58□□□□□ -0.56
PTPN11-202ENST00000392597 TYMSOSQ8TAI1 123 aa11.58□□□□□ -0.56
PTPN11-202ENST00000392597 H0Y9P7 68 aa11.57□□□□□ -0.56
PTPN11-202ENST00000392597 MRPL34Q9BQ48 92 aaKnown RBP11.56□□□□□ -0.56
PTPN11-202ENST00000392597 C8orf87E5RJ46 101 aa11.55□□□□□ -0.56
PTPN11-202ENST00000392597 C1orf195Q5TG92 126 aa11.55□□□□□ -0.56
PTPN11-202ENST00000392597 C4orf48Q5BLP8 95 aa11.55□□□□□ -0.56
PTPN11-202ENST00000392597 TRAV22A0A0B4J277 110 aa11.54□□□□□ -0.56
PTPN11-202ENST00000392597 KRTAP10-4P60372 401 aaPredicted RBP11.53□□□□□ -0.56
PTPN11-202ENST00000392597 NOTCH2NLQ7Z3S9 236 aa11.53□□□□□ -0.56
PTPN11-202ENST00000392597 SPINK1P00995 79 aa11.53□□□□□ -0.56
PTPN11-202ENST00000392597 LINC00208Q96KT6 92 aa11.52□□□□□ -0.57
PTPN11-202ENST00000392597 SERP1Q9Y6X1 66 aa11.52□□□□□ -0.57
PTPN11-202ENST00000392597 FAM229AH3BQW9 127 aa11.5□□□□□ -0.57
PTPN11-202ENST00000392597 Q8N1X5 172 aa11.49□□□□□ -0.57
PTPN11-202ENST00000392597 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
PTPN11-202ENST00000392597 NDUFS5O43920 106 aa11.47□□□□□ -0.57
PTPN11-202ENST00000392597 PRR26Q8N8Z3 221 aa11.47□□□□□ -0.57
PTPN11-202ENST00000392597 Q5VSD8 79 aa11.46□□□□□ -0.57
PTPN11-202ENST00000392597 SPAG11AQ6PDA7 123 aa11.46□□□□□ -0.57
PTPN11-202ENST00000392597 C1orf64Q8NEQ6 169 aa11.46□□□□□ -0.58
PTPN11-202ENST00000392597 LINC00304Q8N9R0 145 aa11.45□□□□□ -0.58
PTPN11-202ENST00000392597 HERC2O95714 4834 aa11.45□□□□□ -0.58
PTPN11-202ENST00000392597 OXTP01178 125 aa11.44□□□□□ -0.58
PTPN11-202ENST00000392597 LINC00313P59037 77 aa11.44□□□□□ -0.58
PTPN11-202ENST00000392597 KRTAP17-1Q9BYP8 105 aa11.44□□□□□ -0.58
PTPN11-202ENST00000392597 SPANXA2-OT1Q8N9U9 137 aa11.37□□□□□ -0.59
PTPN11-202ENST00000392597 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
PTPN11-202ENST00000392597 CYP4F30PQ9H0H9 118 aa11.36□□□□□ -0.59
PTPN11-202ENST00000392597 PKHD1L1Q86WI1 4243 aa11.34□□□□□ -0.59
PTPN11-202ENST00000392597 KRTAP16-1A8MUX0 517 aa11.32□□□□□ -0.6
PTPN11-202ENST00000392597 KRTAP13-3Q3SY46 172 aa11.32□□□□□ -0.6
PTPN11-202ENST00000392597 KRTAP4-5Q9BYR2 181 aa11.29□□□□□ -0.6
PTPN11-202ENST00000392597 LOC101927531A0A1B0GV80 90 aa11.28□□□□□ -0.6
PTPN11-202ENST00000392597 Q5W150 140 aa11.27□□□□□ -0.6
PTPN11-202ENST00000392597 SMIM26A0A096LP01 95 aa11.26□□□□□ -0.61
PTPN11-202ENST00000392597 ABCA13Q86UQ4 5058 aa11.24□□□□□ -0.61
PTPN11-202ENST00000392597 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
PTPN11-202ENST00000392597 PRR4Q16378 134 aa11.23□□□□□ -0.61
PTPN11-202ENST00000392597 PCOTHQ58A44 107 aa11.21□□□□□ -0.62
PTPN11-202ENST00000392597 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
PTPN11-202ENST00000392597 MYCBP2O75592 4640 aa11.19□□□□□ -0.62
PTPN11-202ENST00000392597 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
PTPN11-202ENST00000392597 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.63
PTPN11-202ENST00000392597 FAT3Q8TDW7 4589 aa11.13□□□□□ -0.63
PTPN11-202ENST00000392597 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
PTPN11-202ENST00000392597 PCLOQ9Y6V0 5065 aa11.09□□□□□ -0.63
PTPN11-202ENST00000392597 IGKV2-30P06310 120 aa11.09□□□□□ -0.63
PTPN11-202ENST00000392597 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
PTPN11-202ENST00000392597 TNXBP22105 4242 aa11.05□□□□□ -0.64
PTPN11-202ENST00000392597 C4orf26Q17RF5 130 aa11.04□□□□□ -0.64
PTPN11-202ENST00000392597 COA5Q86WW8 74 aa11.01□□□□□ -0.65
PTPN11-202ENST00000392597 C20orf166-AS1Q96NR2 134 aa11.01□□□□□ -0.65
PTPN11-202ENST00000392597 A8MUU9 505 aa11□□□□□ -0.65
PTPN11-202ENST00000392597 HRES1P13985 223 aa10.98□□□□□ -0.65
PTPN11-202ENST00000392597 C9orf92A6NGG3 77 aa10.98□□□□□ -0.65
PTPN11-202ENST00000392597 MPLKIPQ8TAP9 179 aa10.98□□□□□ -0.65
PTPN11-202ENST00000392597 Q1T7F1 81 aa10.97□□□□□ -0.65
PTPN11-202ENST00000392597 IGKV2D-30A0A075B6S6 120 aa10.94□□□□□ -0.66
PTPN11-202ENST00000392597 MT1HL1P0DM35 61 aa10.94□□□□□ -0.66
PTPN11-202ENST00000392597 DMAC1Q96GE9 116 aa10.92□□□□□ -0.66
PTPN11-202ENST00000392597 V9GYY9 64 aa10.91□□□□□ -0.66
PTPN11-202ENST00000392597 C7orf65Q6ZTY9 151 aa10.9□□□□□ -0.66
PTPN11-202ENST00000392597 ACYP2P14621 99 aa10.89□□□□□ -0.67
PTPN11-202ENST00000392597 J3QL48 77 aa10.88□□□□□ -0.67
PTPN11-202ENST00000392597 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
PTPN11-202ENST00000392597 Q75L30 129 aa10.86□□□□□ -0.67
PTPN11-202ENST00000392597 CHKB-CPT1BH3BT56 60 aa10.72□□□□□ -0.69
PTPN11-202ENST00000392597 A8MUN3 132 aa10.71□□□□□ -0.69
PTPN11-202ENST00000392597 PSPHP1O15172 72 aa10.71□□□□□ -0.69
PTPN11-202ENST00000392597 HERC1Q15751 4861 aa10.7□□□□□ -0.7
PTPN11-202ENST00000392597 LINC01558Q9Y6Z2 57 aa10.7□□□□□ -0.7
PTPN11-202ENST00000392597 SPINK7P58062 85 aa10.68□□□□□ -0.7
PTPN11-202ENST00000392597 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
PTPN11-202ENST00000392597 ATP11AUNQ6ZP68 121 aa10.66□□□□□ -0.7
PTPN11-202ENST00000392597 XP32Q5T750 250 aa10.64□□□□□ -0.71
PTPN11-202ENST00000392597 Q5VV11 94 aa10.64□□□□□ -0.71
PTPN11-202ENST00000392597 PRR15LQ9BU68 103 aa10.64□□□□□ -0.71
PTPN11-202ENST00000392597 BRK1Q8WUW1 75 aa10.55□□□□□ -0.72
PTPN11-202ENST00000392597 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
PTPN11-202ENST00000392597 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
PTPN11-202ENST00000392597 SVIPQ8NHG7 77 aa10.51□□□□□ -0.73
PTPN11-202ENST00000392597 KRTAP3-1Q9BYR8 98 aa10.5□□□□□ -0.73
PTPN11-202ENST00000392597 COX6B2Q6YFQ2 88 aa10.49□□□□□ -0.73
PTPN11-202ENST00000392597 HMCN2Q8NDA2 5059 aa10.48□□□□□ -0.73
PTPN11-202ENST00000392597 SPTSSBQ8NFR3 76 aa10.44□□□□□ -0.74
PTPN11-202ENST00000392597 A0A1B0GU69 56 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms