RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 LRRIQ1Q96JM4 1722 aa-4.86□□□□□ -3.19
RNU6-239P-201ENST00000390990 RPS29P62273 56 aaKnown RBP-4.86□□□□□ -3.19
RNU6-239P-201ENST00000390990 COL5A1-AS1Q5SY13 56 aa-4.86□□□□□ -3.19
RNU6-239P-201ENST00000390990 RPL13AP3Q6NVV1 102 aa-4.86□□□□□ -3.19
RNU6-239P-201ENST00000390990 EPRSP07814 1512 aaKnown RBP-4.87□□□□□ -3.19
RNU6-239P-201ENST00000390990 NCOA2Q15596 1464 aa-4.87□□□□□ -3.19
RNU6-239P-201ENST00000390990 LOC105371267A0A1B0GV96 52 aa-4.87□□□□□ -3.19
RNU6-239P-201ENST00000390990 H3BUA1 57 aa-4.87□□□□□ -3.19
RNU6-239P-201ENST00000390990 NDUFB1O75438 58 aa-4.87□□□□□ -3.19
RNU6-239P-201ENST00000390990 ARFGEF2Q9Y6D5 1785 aa-4.87□□□□□ -3.19
RNU6-239P-201ENST00000390990 VPS13CQ709C8 3753 aa-4.87□□□□□ -3.19
RNU6-239P-201ENST00000390990 DMDP11532 3685 aa-4.88□□□□□ -3.19
RNU6-239P-201ENST00000390990 DEFB131BA0A096LNP1 70 aa-4.88□□□□□ -3.19
RNU6-239P-201ENST00000390990 A8MTW9 85 aa-4.88□□□□□ -3.19
RNU6-239P-201ENST00000390990 M0QY20 66 aa-4.88□□□□□ -3.19
RNU6-239P-201ENST00000390990 NDUFA4O00483 81 aa-4.88□□□□□ -3.19
RNU6-239P-201ENST00000390990 CORTO00230 105 aa-4.89□□□□□ -3.19
RNU6-239P-201ENST00000390990 S100A1P23297 94 aa-4.9□□□□□ -3.19
RNU6-239P-201ENST00000390990 IFI27P40305 119 aaPredicted RBP-4.9□□□□□ -3.19
RNU6-239P-201ENST00000390990 FANCAO15360 1455 aa-4.9□□□□□ -3.19
RNU6-239P-201ENST00000390990 FAUP35544 74 aaKnown RBP-4.91□□□□□ -3.2
RNU6-239P-201ENST00000390990 NEXMIFQ5QGS0 1516 aa-4.92□□□□□ -3.2
RNU6-239P-201ENST00000390990 TMEM203Q969S6 136 aa-4.92□□□□□ -3.2
RNU6-239P-201ENST00000390990 GTF2H5Q6ZYL4 71 aa-4.93□□□□□ -3.2
RNU6-239P-201ENST00000390990 ERVK-7P63135 1459 aa-4.94□□□□□ -3.2
RNU6-239P-201ENST00000390990 MINOS1Q5TGZ0 78 aa-4.94□□□□□ -3.2
RNU6-239P-201ENST00000390990 ACBD7Q8N6N7 88 aa-4.94□□□□□ -3.2
RNU6-239P-201ENST00000390990 TSC22D3Q99576 134 aa-4.94□□□□□ -3.2
RNU6-239P-201ENST00000390990 UBR1Q8IWV7 1749 aa-4.94□□□□□ -3.2
RNU6-239P-201ENST00000390990 NCBP2-AS2Q69YL0 99 aa-4.95□□□□□ -3.2
RNU6-239P-201ENST00000390990 CCDC88BA6NC98 1476 aa-4.96□□□□□ -3.2
RNU6-239P-201ENST00000390990 TJP1Q07157 1748 aa-4.97□□□□□ -3.2
RNU6-239P-201ENST00000390990 DNMBPQ6XZF7 1577 aa-4.98□□□□□ -3.21
RNU6-239P-201ENST00000390990 UMAD1C9J7I0 102 aa-4.98□□□□□ -3.21
RNU6-239P-201ENST00000390990 SFTA3P0C7M3 94 aa-4.98□□□□□ -3.21
RNU6-239P-201ENST00000390990 C20orf78Q9BR46 151 aa-4.98□□□□□ -3.21
RNU6-239P-201ENST00000390990 PCNTO95613 3336 aa-4.99□□□□□ -3.21
RNU6-239P-201ENST00000390990 CRIP1P50238 77 aa-4.99□□□□□ -3.21
RNU6-239P-201ENST00000390990 MRPS10P82664 201 aaKnown RBP-4.99□□□□□ -3.21
RNU6-239P-201ENST00000390990 NRAPQ86VF7 1730 aa-5□□□□□ -3.21
RNU6-239P-201ENST00000390990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-5□□□□□ -3.21
RNU6-239P-201ENST00000390990 DLEU1O43261 78 aa-5□□□□□ -3.21
RNU6-239P-201ENST00000390990 MRPL33O75394 65 aaKnown RBP-5□□□□□ -3.21
RNU6-239P-201ENST00000390990 DEFB136Q30KP8 78 aa-5□□□□□ -3.21
RNU6-239P-201ENST00000390990 MYO3AQ8NEV4 1616 aa-5.01□□□□□ -3.21
RNU6-239P-201ENST00000390990 MYMXA0A1B0GTQ4 84 aa-5.02□□□□□ -3.21
RNU6-239P-201ENST00000390990 SMIM11AP58511 58 aa-5.02□□□□□ -3.21
RNU6-239P-201ENST00000390990 PEA15Q15121 130 aa-5.02□□□□□ -3.21
RNU6-239P-201ENST00000390990 URB2Q14146 1524 aaKnown RBP-5.02□□□□□ -3.21
RNU6-239P-201ENST00000390990 A0A1B0GV90 55 aa-5.03□□□□□ -3.21
RNU6-239P-201ENST00000390990 RNF17Q9BXT8 1623 aaKnown RBP-5.04□□□□□ -3.22
RNU6-239P-201ENST00000390990 LINC00032P0C843 101 aa-5.04□□□□□ -3.22
RNU6-239P-201ENST00000390990 ZFYVE16Q7Z3T8 1539 aa-5.04□□□□□ -3.22
RNU6-239P-201ENST00000390990 CEP350Q5VT06 3117 aa-5.05□□□□□ -3.22
RNU6-239P-201ENST00000390990 FCER1GP30273 86 aa-5.05□□□□□ -3.22
RNU6-239P-201ENST00000390990 MED14O60244 1454 aa-5.06□□□□□ -3.22
RNU6-239P-201ENST00000390990 CD163L1Q9NR16 1453 aa-5.06□□□□□ -3.22
RNU6-239P-201ENST00000390990 SARNPP82979 210 aaKnown RBP-5.06□□□□□ -3.22
RNU6-239P-201ENST00000390990 LEAP2Q969E1 77 aa-5.06□□□□□ -3.22
RNU6-239P-201ENST00000390990 C6orf48Q9UBA6 75 aa-5.06□□□□□ -3.22
RNU6-239P-201ENST00000390990 FRYLO94915 3013 aa-5.06□□□□□ -3.22
RNU6-239P-201ENST00000390990 CENPEQ02224 2701 aa-5.07□□□□□ -3.22
RNU6-239P-201ENST00000390990 RICTORQ6R327 1708 aa-5.07□□□□□ -3.22
RNU6-239P-201ENST00000390990 FAM107BQ9H098 131 aa-5.08□□□□□ -3.22
RNU6-239P-201ENST00000390990 INO80Q9ULG1 1556 aaPredicted RBP-5.08□□□□□ -3.22
RNU6-239P-201ENST00000390990 MAP3K4Q9Y6R4 1608 aa-5.08□□□□□ -3.22
RNU6-239P-201ENST00000390990 PPLO60437 1756 aa-5.09□□□□□ -3.22
RNU6-239P-201ENST00000390990 GNG8Q9UK08 70 aa-5.1□□□□□ -3.23
RNU6-239P-201ENST00000390990 CEBPZOSA8MTT3 80 aa-5.11□□□□□ -3.23
RNU6-239P-201ENST00000390990 NREPQ16612 68 aa-5.11□□□□□ -3.23
RNU6-239P-201ENST00000390990 ARHGAP35Q9NRY4 1499 aa-5.12□□□□□ -3.23
RNU6-239P-201ENST00000390990 DPY30Q9C005 99 aa-5.12□□□□□ -3.23
RNU6-239P-201ENST00000390990 KCNQ1DNQ9H478 68 aa-5.12□□□□□ -3.23
RNU6-239P-201ENST00000390990 PIK3C2BO00750 1634 aa-5.12□□□□□ -3.23
RNU6-239P-201ENST00000390990 RABAC1Q9UI14 185 aa-5.13□□□□□ -3.23
RNU6-239P-201ENST00000390990 SZT2Q5T011 3432 aa-5.14□□□□□ -3.23
RNU6-239P-201ENST00000390990 HFM1A2PYH4 1435 aa-5.14□□□□□ -3.23
RNU6-239P-201ENST00000390990 CFAP43Q8NDM7 1665 aa-5.17□□□□□ -3.24
RNU6-239P-201ENST00000390990 S100A10P60903 97 aa-5.17□□□□□ -3.24
RNU6-239P-201ENST00000390990 UBL5Q9BZL1 73 aa-5.17□□□□□ -3.24
RNU6-239P-201ENST00000390990 KIF21BO75037 1637 aa-5.19□□□□□ -3.24
RNU6-239P-201ENST00000390990 CROCC2H7BZ55 1655 aa-5.21□□□□□ -3.24
RNU6-239P-201ENST00000390990 ASXL1Q8IXJ9 1541 aa-5.22□□□□□ -3.24
RNU6-239P-201ENST00000390990 MYO5CQ9NQX4 1742 aa-5.23□□□□□ -3.25
RNU6-239P-201ENST00000390990 C20orf202A1L168 122 aa-5.23□□□□□ -3.25
RNU6-239P-201ENST00000390990 CEP162Q5TB80 1403 aa-5.23□□□□□ -3.25
RNU6-239P-201ENST00000390990 KIF14Q15058 1648 aa-5.25□□□□□ -3.25
RNU6-239P-201ENST00000390990 HMGA1P17096 107 aaKnown RBP-5.25□□□□□ -3.25
RNU6-239P-201ENST00000390990 UNC13AQ9UPW8 1703 aa-5.26□□□□□ -3.25
RNU6-239P-201ENST00000390990 RALGAPBQ86X10 1494 aa-5.26□□□□□ -3.25
RNU6-239P-201ENST00000390990 AKAP12Q02952 1782 aa-5.27□□□□□ -3.25
RNU6-239P-201ENST00000390990 LINC00643Q86TS7 51 aa-5.27□□□□□ -3.25
RNU6-239P-201ENST00000390990 RBP2P50120 134 aa-5.28□□□□□ -3.25
RNU6-239P-201ENST00000390990 NHSQ6T4R5 1651 aa-5.28□□□□□ -3.26
RNU6-239P-201ENST00000390990 GYPAP02724 150 aa-5.29□□□□□ -3.26
RNU6-239P-201ENST00000390990 S100A12P80511 92 aa-5.29□□□□□ -3.26
RNU6-239P-201ENST00000390990 C2orf88Q9BSF0 95 aa-5.3□□□□□ -3.26
RNU6-239P-201ENST00000390990 ETDCA0A1B0GVM5 59 aa-5.31□□□□□ -3.26
RNU6-239P-201ENST00000390990 HMGN1P05114 100 aa-5.31□□□□□ -3.26
RNU6-239P-201ENST00000390990 SNRPFP62306 86 aaKnown RBP-5.31□□□□□ -3.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms