RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 KRTAP19-6Q3LI70 58 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 BVES-AS1Q5T3Y7 98 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 RPL13AP3Q6NVV1 102 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 RPS27LQ71UM5 84 aaKnown RBP-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 A0A1B0GUL6 1792 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 NCOA2Q15596 1464 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 LRRIQ1Q96JM4 1722 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 ARFGEF2Q9Y6D5 1785 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 H3BUA1 57 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 M0QY20 66 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 NDUFA4O00483 81 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 SPART-AS1P0CW21 52 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 ACBD7Q8N6N7 88 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 FANCAO15360 1455 aa-1.46□□□□□ -2.64
SNORD28-201ENST00000384706 DEFB131BA0A096LNP1 70 aa-1.47□□□□□ -2.64
SNORD28-201ENST00000384706 M0QZ58 72 aa-1.47□□□□□ -2.64
SNORD28-201ENST00000384706 DLEU1O43261 78 aa-1.47□□□□□ -2.64
SNORD28-201ENST00000384706 MINOS1Q5TGZ0 78 aa-1.47□□□□□ -2.64
SNORD28-201ENST00000384706 FAM107BQ9H098 131 aa-1.47□□□□□ -2.64
SNORD28-201ENST00000384706 MYO15AQ9UKN7 3530 aa-1.47□□□□□ -2.65
SNORD28-201ENST00000384706 MYO3AQ8NEV4 1616 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 ERVK-7P63135 1459 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 UBR1Q8IWV7 1749 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 NEXMIFQ5QGS0 1516 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 A0A1B0GV90 55 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 A8MTW9 85 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 MRPL33O75394 65 aaKnown RBP-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 SMIM11AP58511 58 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 MRPS10P82664 201 aaKnown RBP-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 SARNPP82979 210 aaKnown RBP-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 PEA15Q15121 130 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 CFAP54Q96N23 3096 aa-1.48□□□□□ -2.65
SNORD28-201ENST00000384706 NRAPQ86VF7 1730 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 CCDC88BA6NC98 1476 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 MYMXA0A1B0GTQ4 84 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 UMAD1C9J7I0 102 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 SFTA3P0C7M3 94 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 RPS29P62273 56 aaKnown RBP-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 NCBP2-AS2Q69YL0 99 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 C20orf78Q9BR46 151 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 GNG8Q9UK08 70 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 TJP1Q07157 1748 aa-1.49□□□□□ -2.65
SNORD28-201ENST00000384706 URB2Q14146 1524 aaKnown RBP-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 SPEGQ15772 3267 aa-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 LINC00032P0C843 101 aa-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 FCER1GP30273 86 aa-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 DPY30Q9C005 99 aa-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 PPLO60437 1756 aa-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 ZFYVE16Q7Z3T8 1539 aa-1.5□□□□□ -2.65
SNORD28-201ENST00000384706 RICTORQ6R327 1708 aa-1.51□□□□□ -2.65
SNORD28-201ENST00000384706 MT1FP04733 61 aa-1.51□□□□□ -2.65
SNORD28-201ENST00000384706 DNMBPQ6XZF7 1577 aa-1.51□□□□□ -2.65
SNORD28-201ENST00000384706 CEBPZOSA8MTT3 80 aa-1.52□□□□□ -2.65
SNORD28-201ENST00000384706 CRIP1P50238 77 aa-1.52□□□□□ -2.65
SNORD28-201ENST00000384706 S100A10P60903 97 aa-1.52□□□□□ -2.65
SNORD28-201ENST00000384706 C6orf48Q9UBA6 75 aa-1.52□□□□□ -2.65
SNORD28-201ENST00000384706 HFM1A2PYH4 1435 aa-1.52□□□□□ -2.65
SNORD28-201ENST00000384706 PIK3C2BO00750 1634 aa-1.52□□□□□ -2.65
SNORD28-201ENST00000384706 MAP3K4Q9Y6R4 1608 aa-1.52□□□□□ -2.65
SNORD28-201ENST00000384706 NREPQ16612 68 aa-1.53□□□□□ -2.65
SNORD28-201ENST00000384706 DEFB136Q30KP8 78 aa-1.53□□□□□ -2.65
SNORD28-201ENST00000384706 CFAP43Q8NDM7 1665 aa-1.53□□□□□ -2.65
SNORD28-201ENST00000384706 RNF17Q9BXT8 1623 aaKnown RBP-1.53□□□□□ -2.65
SNORD28-201ENST00000384706 UBL5Q9BZL1 73 aa-1.53□□□□□ -2.65
SNORD28-201ENST00000384706 CD163L1Q9NR16 1453 aa-1.53□□□□□ -2.65
SNORD28-201ENST00000384706 INO80Q9ULG1 1556 aaPredicted RBP-1.53□□□□□ -2.65
SNORD28-201ENST00000384706 ARHGAP35Q9NRY4 1499 aa-1.54□□□□□ -2.66
SNORD28-201ENST00000384706 C20orf202A1L168 122 aa-1.54□□□□□ -2.66
SNORD28-201ENST00000384706 LEAP2Q969E1 77 aa-1.54□□□□□ -2.66
SNORD28-201ENST00000384706 KCNQ1DNQ9H478 68 aa-1.54□□□□□ -2.66
SNORD28-201ENST00000384706 RABAC1Q9UI14 185 aa-1.54□□□□□ -2.66
SNORD28-201ENST00000384706 WDFY3Q8IZQ1 3526 aa-1.54□□□□□ -2.66
SNORD28-201ENST00000384706 DMDP11532 3685 aa-1.55□□□□□ -2.66
SNORD28-201ENST00000384706 MED14O60244 1454 aa-1.56□□□□□ -2.66
SNORD28-201ENST00000384706 CEP162Q5TB80 1403 aa-1.56□□□□□ -2.66
SNORD28-201ENST00000384706 AKAP12Q02952 1782 aa-1.56□□□□□ -2.66
SNORD28-201ENST00000384706 RBP2P50120 134 aa-1.56□□□□□ -2.66
SNORD28-201ENST00000384706 S100A12P80511 92 aa-1.56□□□□□ -2.66
SNORD28-201ENST00000384706 MYO5CQ9NQX4 1742 aa-1.57□□□□□ -2.66
SNORD28-201ENST00000384706 KIF14Q15058 1648 aa-1.57□□□□□ -2.66
SNORD28-201ENST00000384706 GYPAP02724 150 aa-1.57□□□□□ -2.66
SNORD28-201ENST00000384706 HMGN1P05114 100 aa-1.57□□□□□ -2.66
SNORD28-201ENST00000384706 RALGAPBQ86X10 1494 aa-1.57□□□□□ -2.66
SNORD28-201ENST00000384706 PCNTO95613 3336 aa-1.58□□□□□ -2.66
SNORD28-201ENST00000384706 PVALEFA0A1B0GWK0 134 aa-1.58□□□□□ -2.66
SNORD28-201ENST00000384706 LINC00643Q86TS7 51 aa-1.58□□□□□ -2.66
SNORD28-201ENST00000384706 C2orf88Q9BSF0 95 aa-1.58□□□□□ -2.66
SNORD28-201ENST00000384706 VPS13CQ709C8 3753 aa-1.58□□□□□ -2.66
SNORD28-201ENST00000384706 KIF21BO75037 1637 aa-1.58□□□□□ -2.66
SNORD28-201ENST00000384706 HMGA1P17096 107 aaKnown RBP-1.59□□□□□ -2.66
SNORD28-201ENST00000384706 SNRPFP62306 86 aaKnown RBP-1.59□□□□□ -2.66
SNORD28-201ENST00000384706 NHSQ6T4R5 1651 aa-1.59□□□□□ -2.66
SNORD28-201ENST00000384706 ASXL1Q8IXJ9 1541 aa-1.6□□□□□ -2.67
SNORD28-201ENST00000384706 A0A087WXM4 84 aa-1.6□□□□□ -2.67
SNORD28-201ENST00000384706 ETDCA0A1B0GVM5 59 aa-1.6□□□□□ -2.67
SNORD28-201ENST00000384706 ATP5EP2Q5VTU8 51 aa-1.6□□□□□ -2.67
SNORD28-201ENST00000384706 PREX2Q70Z35 1606 aa-1.6□□□□□ -2.67
SNORD28-201ENST00000384706 UNC13AQ9UPW8 1703 aa-1.6□□□□□ -2.67
SNORD28-201ENST00000384706 CROCC2H7BZ55 1655 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms