RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 MT-ATP8P03928 68 aa11.46□□□□□ -0.57
TSSC4-203ENST00000380996 PRR15Q8IV56 129 aa11.46□□□□□ -0.57
TSSC4-203ENST00000380996 Q8N9L7 120 aa11.45□□□□□ -0.58
TSSC4-203ENST00000380996 A0A1B0GVX0 72 aa11.45□□□□□ -0.58
TSSC4-203ENST00000380996 HIST1H4AP62805 103 aaKnown RBP11.44□□□□□ -0.58
TSSC4-203ENST00000380996 IGHV6-1A0A0B4J1U7 121 aa11.43□□□□□ -0.58
TSSC4-203ENST00000380996 IMUPQ9GZP8 106 aa11.42□□□□□ -0.58
TSSC4-203ENST00000380996 PRR4Q16378 134 aa11.4□□□□□ -0.59
TSSC4-203ENST00000380996 IGLV7-46A0A075B6I9 117 aa11.39□□□□□ -0.59
TSSC4-203ENST00000380996 C8orf87E5RJ46 101 aa11.38□□□□□ -0.59
TSSC4-203ENST00000380996 LINC00313P59037 77 aa11.35□□□□□ -0.59
TSSC4-203ENST00000380996 C8orf17Q9NRJ1 99 aa11.35□□□□□ -0.59
TSSC4-203ENST00000380996 A0A087WVE0 104 aa11.32□□□□□ -0.6
TSSC4-203ENST00000380996 HCG22E2RYF7 251 aa11.31□□□□□ -0.6
TSSC4-203ENST00000380996 MMP24-AS1A0A0U1RRL7 71 aa11.3□□□□□ -0.6
TSSC4-203ENST00000380996 NOTCH2NLQ7Z3S9 236 aa11.3□□□□□ -0.6
TSSC4-203ENST00000380996 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
TSSC4-203ENST00000380996 CASC2Q6XLA1 102 aa11.28□□□□□ -0.6
TSSC4-203ENST00000380996 C9orf92A6NGG3 77 aa11.27□□□□□ -0.61
TSSC4-203ENST00000380996 WFDC13Q8IUB5 93 aa11.27□□□□□ -0.61
TSSC4-203ENST00000380996 KRTAP13-3Q3SY46 172 aa11.24□□□□□ -0.61
TSSC4-203ENST00000380996 TMEM254Q8TBM7 123 aa11.24□□□□□ -0.61
TSSC4-203ENST00000380996 TPRXLQ17RH7 258 aa11.23□□□□□ -0.61
TSSC4-203ENST00000380996 MRPL34Q9BQ48 92 aaKnown RBP11.21□□□□□ -0.61
TSSC4-203ENST00000380996 KRTAP16-1A8MUX0 517 aa11.19□□□□□ -0.62
TSSC4-203ENST00000380996 FAM236AA0A1B0GUQ0 79 aa11.18□□□□□ -0.62
TSSC4-203ENST00000380996 FAM236BA0A1B0GV22 79 aa11.18□□□□□ -0.62
TSSC4-203ENST00000380996 SCGB1A1P11684 91 aa11.17□□□□□ -0.62
TSSC4-203ENST00000380996 HMCN2Q8NDA2 5059 aa11.14□□□□□ -0.63
TSSC4-203ENST00000380996 NDUFS5O43920 106 aa11.13□□□□□ -0.63
TSSC4-203ENST00000380996 Q8N9P0 234 aaPredicted RBP11.13□□□□□ -0.63
TSSC4-203ENST00000380996 C20orf166-AS1Q96NR2 134 aa11.11□□□□□ -0.63
TSSC4-203ENST00000380996 XP32Q5T750 250 aa11.1□□□□□ -0.63
TSSC4-203ENST00000380996 A8MUU9 505 aa11.09□□□□□ -0.63
TSSC4-203ENST00000380996 Q75L30 129 aa11.08□□□□□ -0.64
TSSC4-203ENST00000380996 ATOX1O00244 68 aa11.07□□□□□ -0.64
TSSC4-203ENST00000380996 TP53AIP1Q9HCN2 124 aa11.07□□□□□ -0.64
TSSC4-203ENST00000380996 SMIM20Q8N5G0 67 aa11.04□□□□□ -0.64
TSSC4-203ENST00000380996 RPL37P61927 97 aaKnown RBP11.02□□□□□ -0.65
TSSC4-203ENST00000380996 OCR1Q9BZK8 76 aa11.02□□□□□ -0.65
TSSC4-203ENST00000380996 UQCRQO14949 82 aa11□□□□□ -0.65
TSSC4-203ENST00000380996 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
TSSC4-203ENST00000380996 TRAV7A0A075B6U4 112 aa10.96□□□□□ -0.65
TSSC4-203ENST00000380996 ZCCHC13Q8WW36 166 aaKnown RBP10.95□□□□□ -0.66
TSSC4-203ENST00000380996 LPAP08519 4548 aa10.95□□□□□ -0.66
TSSC4-203ENST00000380996 SERP2Q8N6R1 65 aa10.91□□□□□ -0.66
TSSC4-203ENST00000380996 TRAV22A0A0B4J277 110 aa10.9□□□□□ -0.66
TSSC4-203ENST00000380996 C5orf47Q569G3 176 aa10.89□□□□□ -0.67
TSSC4-203ENST00000380996 Q5W150 140 aa10.89□□□□□ -0.67
TSSC4-203ENST00000380996 SEC61BP60468 96 aaKnown RBP10.89□□□□□ -0.67
TSSC4-203ENST00000380996 ANAPC13Q9BS18 74 aa10.89□□□□□ -0.67
TSSC4-203ENST00000380996 MP68P56378 58 aa10.87□□□□□ -0.67
TSSC4-203ENST00000380996 H0Y9P7 68 aa10.86□□□□□ -0.67
TSSC4-203ENST00000380996 UBR4Q5T4S7 5183 aa10.86□□□□□ -0.67
TSSC4-203ENST00000380996 PCOTHQ58A44 107 aa10.84□□□□□ -0.67
TSSC4-203ENST00000380996 LRP2P98164 4655 aa10.84□□□□□ -0.67
TSSC4-203ENST00000380996 H3BPC8 53 aa10.8□□□□□ -0.68
TSSC4-203ENST00000380996 COX7CP15954 63 aa10.8□□□□□ -0.68
TSSC4-203ENST00000380996 LINC00208Q96KT6 92 aa10.77□□□□□ -0.69
TSSC4-203ENST00000380996 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
TSSC4-203ENST00000380996 C1orf64Q8NEQ6 169 aa10.76□□□□□ -0.69
TSSC4-203ENST00000380996 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
TSSC4-203ENST00000380996 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
TSSC4-203ENST00000380996 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
TSSC4-203ENST00000380996 C20orf197Q8N268 126 aa10.72□□□□□ -0.69
TSSC4-203ENST00000380996 SPINK7P58062 85 aa10.7□□□□□ -0.7
TSSC4-203ENST00000380996 A0A0U1RQV1 116 aa10.69□□□□□ -0.7
TSSC4-203ENST00000380996 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
TSSC4-203ENST00000380996 MUC17Q685J3 4493 aa10.66□□□□□ -0.7
TSSC4-203ENST00000380996 SNURFQ9Y675 71 aa10.65□□□□□ -0.7
TSSC4-203ENST00000380996 KLKP1Q107X0 134 aa10.63□□□□□ -0.71
TSSC4-203ENST00000380996 CCDC179H3BU77 68 aa10.61□□□□□ -0.71
TSSC4-203ENST00000380996 PCP4P48539 62 aa10.58□□□□□ -0.72
TSSC4-203ENST00000380996 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
TSSC4-203ENST00000380996 KRTAP4-1Q9BYQ7 146 aa10.54□□□□□ -0.72
TSSC4-203ENST00000380996 NDUFC1O43677 76 aa10.53□□□□□ -0.72
TSSC4-203ENST00000380996 HRES1P13985 223 aa10.5□□□□□ -0.73
TSSC4-203ENST00000380996 CYSTM1Q9H1C7 97 aa10.46□□□□□ -0.74
TSSC4-203ENST00000380996 RBM12B-AS1Q9P1G2 102 aa10.45□□□□□ -0.74
TSSC4-203ENST00000380996 C4orf26Q17RF5 130 aa10.44□□□□□ -0.74
TSSC4-203ENST00000380996 H7BZZ5 65 aa10.43□□□□□ -0.74
TSSC4-203ENST00000380996 MPLKIPQ8TAP9 179 aa10.42□□□□□ -0.74
TSSC4-203ENST00000380996 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
TSSC4-203ENST00000380996 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
TSSC4-203ENST00000380996 FAM236DA0A1B0GTK5 79 aa10.34□□□□□ -0.75
TSSC4-203ENST00000380996 FAM236CP0DP71 79 aa10.34□□□□□ -0.75
TSSC4-203ENST00000380996 MUC2Q02817 5179 aa10.34□□□□□ -0.75
TSSC4-203ENST00000380996 A8MUN3 132 aa10.31□□□□□ -0.76
TSSC4-203ENST00000380996 TMEM258P61165 79 aa10.28□□□□□ -0.76
TSSC4-203ENST00000380996 DMAC1Q96GE9 116 aa10.28□□□□□ -0.76
TSSC4-203ENST00000380996 KRTAP3-1Q9BYR8 98 aa10.28□□□□□ -0.76
TSSC4-203ENST00000380996 ATP5EP56381 51 aaPredicted RBP10.25□□□□□ -0.77
TSSC4-203ENST00000380996 H1FX-AS1Q4G0G2 97 aa10.23□□□□□ -0.77
TSSC4-203ENST00000380996 ACYP2P14621 99 aa10.23□□□□□ -0.77
TSSC4-203ENST00000380996 KRTAP19-2Q3LHN2 52 aa10.21□□□□□ -0.78
TSSC4-203ENST00000380996 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
TSSC4-203ENST00000380996 S4R3F8 94 aa10.09□□□□□ -0.79
TSSC4-203ENST00000380996 CHKB-CPT1BH3BT56 60 aa10.06□□□□□ -0.8
TSSC4-203ENST00000380996 COA5Q86WW8 74 aa10.05□□□□□ -0.8
TSSC4-203ENST00000380996 LCA10Q71F78 164 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms