RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.06
TNFSF13-203ENST00000380535 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
TNFSF13-203ENST00000380535 SRRM2Q9UQ35 2752 aaKnown RBP8.45□□□□□ -1.06
TNFSF13-203ENST00000380535 LOC101927531A0A1B0GV80 90 aa8.45□□□□□ -1.06
TNFSF13-203ENST00000380535 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
TNFSF13-203ENST00000380535 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
TNFSF13-203ENST00000380535 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
TNFSF13-203ENST00000380535 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
TNFSF13-203ENST00000380535 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
TNFSF13-203ENST00000380535 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
TNFSF13-203ENST00000380535 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
TNFSF13-203ENST00000380535 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
TNFSF13-203ENST00000380535 PRAC1Q96KF2 57 aa8.41□□□□□ -1.06
TNFSF13-203ENST00000380535 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
TNFSF13-203ENST00000380535 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
TNFSF13-203ENST00000380535 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
TNFSF13-203ENST00000380535 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
TNFSF13-203ENST00000380535 A0A1B0GVY2 172 aa8.37□□□□□ -1.07
TNFSF13-203ENST00000380535 PRR15LQ9BU68 103 aa8.37□□□□□ -1.07
TNFSF13-203ENST00000380535 DSCR10P59022 87 aa8.36□□□□□ -1.07
TNFSF13-203ENST00000380535 DNAH5Q8TE73 4624 aa8.36□□□□□ -1.07
TNFSF13-203ENST00000380535 HYDINQ4G0P3 5121 aa8.34□□□□□ -1.07
TNFSF13-203ENST00000380535 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
TNFSF13-203ENST00000380535 FAT2Q9NYQ8 4349 aa8.33□□□□□ -1.08
TNFSF13-203ENST00000380535 PKD1P98161 4303 aa8.33□□□□□ -1.08
TNFSF13-203ENST00000380535 K7EQZ3 153 aa8.32□□□□□ -1.08
TNFSF13-203ENST00000380535 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
TNFSF13-203ENST00000380535 IGLV9-49A0A0B4J1Y8 123 aa8.28□□□□□ -1.08
TNFSF13-203ENST00000380535 A0A087WSZ3 146 aa8.27□□□□□ -1.09
TNFSF13-203ENST00000380535 ROMO1P60602 79 aa8.27□□□□□ -1.09
TNFSF13-203ENST00000380535 SSBP3-AS1Q7Z2R9 100 aa8.26□□□□□ -1.09
TNFSF13-203ENST00000380535 NDUFB1O75438 58 aa8.25□□□□□ -1.09
TNFSF13-203ENST00000380535 ZCCHC13Q8WW36 166 aaKnown RBP8.25□□□□□ -1.09
TNFSF13-203ENST00000380535 DEFB116Q30KQ4 102 aa8.24□□□□□ -1.09
TNFSF13-203ENST00000380535 KRTAP16-1A8MUX0 517 aa8.23□□□□□ -1.09
TNFSF13-203ENST00000380535 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
TNFSF13-203ENST00000380535 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.09
TNFSF13-203ENST00000380535 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
TNFSF13-203ENST00000380535 RYR2Q92736 4967 aa8.19□□□□□ -1.1
TNFSF13-203ENST00000380535 WFDC13Q8IUB5 93 aa8.18□□□□□ -1.1
TNFSF13-203ENST00000380535 LINC00472Q9H8W2 130 aa8.17□□□□□ -1.1
TNFSF13-203ENST00000380535 LINC00208Q96KT6 92 aa8.17□□□□□ -1.1
TNFSF13-203ENST00000380535 ANAPC11Q9NYG5 84 aa8.17□□□□□ -1.1
TNFSF13-203ENST00000380535 KRTAP29-1A8MX34 341 aaPredicted RBP8.15□□□□□ -1.1
TNFSF13-203ENST00000380535 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
TNFSF13-203ENST00000380535 A8MWP4 228 aa8.14□□□□□ -1.11
TNFSF13-203ENST00000380535 KRTAP1-4P0C5Y4 121 aa8.13□□□□□ -1.11
TNFSF13-203ENST00000380535 LINC01558Q9Y6Z2 57 aa8.13□□□□□ -1.11
TNFSF13-203ENST00000380535 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
TNFSF13-203ENST00000380535 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
TNFSF13-203ENST00000380535 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
TNFSF13-203ENST00000380535 SMR3BP02814 79 aaPredicted RBP8.09□□□□□ -1.11
TNFSF13-203ENST00000380535 KRTAP13-2Q52LG2 175 aa8.09□□□□□ -1.11
TNFSF13-203ENST00000380535 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
TNFSF13-203ENST00000380535 Q96NJ1 140 aa8.08□□□□□ -1.12
TNFSF13-203ENST00000380535 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
TNFSF13-203ENST00000380535 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
TNFSF13-203ENST00000380535 H3BPC8 53 aa8.06□□□□□ -1.12
TNFSF13-203ENST00000380535 KRTAP10-4P60372 401 aaPredicted RBP8.06□□□□□ -1.12
TNFSF13-203ENST00000380535 H0Y9P7 68 aa8.05□□□□□ -1.12
TNFSF13-203ENST00000380535 MMP24-AS1A0A0U1RRL7 71 aa8.05□□□□□ -1.12
TNFSF13-203ENST00000380535 SPAG11AQ6PDA7 123 aa8.05□□□□□ -1.12
TNFSF13-203ENST00000380535 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
TNFSF13-203ENST00000380535 MIR22HGQ0VDD5 57 aa8.04□□□□□ -1.12
TNFSF13-203ENST00000380535 KMT2CQ8NEZ4 4911 aaKnown RBP8.04□□□□□ -1.12
TNFSF13-203ENST00000380535 SPINK1P00995 79 aa8.03□□□□□ -1.12
TNFSF13-203ENST00000380535 SPINK7P58062 85 aa8.02□□□□□ -1.13
TNFSF13-203ENST00000380535 PRR4Q16378 134 aa8.01□□□□□ -1.13
TNFSF13-203ENST00000380535 A0A1B0GVX0 72 aa7.99□□□□□ -1.13
TNFSF13-203ENST00000380535 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
TNFSF13-203ENST00000380535 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
TNFSF13-203ENST00000380535 P0C880 135 aa7.95□□□□□ -1.14
TNFSF13-203ENST00000380535 C8orf17Q9NRJ1 99 aa7.95□□□□□ -1.14
TNFSF13-203ENST00000380535 Q5VSD8 79 aa7.95□□□□□ -1.14
TNFSF13-203ENST00000380535 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
TNFSF13-203ENST00000380535 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
TNFSF13-203ENST00000380535 COA5Q86WW8 74 aa7.9□□□□□ -1.15
TNFSF13-203ENST00000380535 FAT1Q14517 4588 aa7.89□□□□□ -1.15
TNFSF13-203ENST00000380535 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
TNFSF13-203ENST00000380535 Q8N1X5 172 aa7.87□□□□□ -1.15
TNFSF13-203ENST00000380535 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
TNFSF13-203ENST00000380535 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
TNFSF13-203ENST00000380535 K7ERS5 55 aa7.86□□□□□ -1.15
TNFSF13-203ENST00000380535 RYR3Q15413 4870 aa7.85□□□□□ -1.15
TNFSF13-203ENST00000380535 PCOTHQ58A44 107 aa7.83□□□□□ -1.16
TNFSF13-203ENST00000380535 C20orf166-AS1Q96NR2 134 aa7.83□□□□□ -1.16
TNFSF13-203ENST00000380535 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
TNFSF13-203ENST00000380535 SPATA8Q6RVD6 105 aa7.81□□□□□ -1.16
TNFSF13-203ENST00000380535 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
TNFSF13-203ENST00000380535 HSPG2P98160 4391 aa7.76□□□□□ -1.17
TNFSF13-203ENST00000380535 RYR1P21817 5038 aa7.76□□□□□ -1.17
TNFSF13-203ENST00000380535 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
TNFSF13-203ENST00000380535 Q5W150 140 aa7.71□□□□□ -1.17
TNFSF13-203ENST00000380535 NDUFAF8A1L188 74 aa7.69□□□□□ -1.18
TNFSF13-203ENST00000380535 HRES1P13985 223 aa7.68□□□□□ -1.18
TNFSF13-203ENST00000380535 UQCR11O14957 56 aa7.67□□□□□ -1.18
TNFSF13-203ENST00000380535 DMAC1Q96GE9 116 aa7.66□□□□□ -1.18
TNFSF13-203ENST00000380535 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
TNFSF13-203ENST00000380535 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
TNFSF13-203ENST00000380535 FLG2Q5D862 2391 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms