RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
USP3-202ENST00000380324 MP68P56378 58 aa6.96□□□□□ -1.3
USP3-202ENST00000380324 FAT1Q14517 4588 aa6.96□□□□□ -1.3
USP3-202ENST00000380324 H0Y9P7 68 aa6.95□□□□□ -1.3
USP3-202ENST00000380324 NDUFS5O43920 106 aa6.95□□□□□ -1.3
USP3-202ENST00000380324 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
USP3-202ENST00000380324 OXTP01178 125 aa6.94□□□□□ -1.3
USP3-202ENST00000380324 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
USP3-202ENST00000380324 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
USP3-202ENST00000380324 TYMSOSQ8TAI1 123 aa6.94□□□□□ -1.3
USP3-202ENST00000380324 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
USP3-202ENST00000380324 TRAV22A0A0B4J277 110 aa6.92□□□□□ -1.3
USP3-202ENST00000380324 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
USP3-202ENST00000380324 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
USP3-202ENST00000380324 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
USP3-202ENST00000380324 ATP5EP56381 51 aaPredicted RBP6.9□□□□□ -1.31
USP3-202ENST00000380324 C1orf195Q5TG92 126 aa6.9□□□□□ -1.31
USP3-202ENST00000380324 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
USP3-202ENST00000380324 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
USP3-202ENST00000380324 PRR4Q16378 134 aa6.88□□□□□ -1.31
USP3-202ENST00000380324 Q5XG85 94 aa6.88□□□□□ -1.31
USP3-202ENST00000380324 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
USP3-202ENST00000380324 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
USP3-202ENST00000380324 RYR3Q15413 4870 aa6.87□□□□□ -1.31
USP3-202ENST00000380324 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
USP3-202ENST00000380324 H3BPC8 53 aa6.85□□□□□ -1.31
USP3-202ENST00000380324 SPINK1P00995 79 aa6.84□□□□□ -1.31
USP3-202ENST00000380324 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
USP3-202ENST00000380324 C8orf87E5RJ46 101 aa6.84□□□□□ -1.31
USP3-202ENST00000380324 LINC00313P59037 77 aa6.83□□□□□ -1.32
USP3-202ENST00000380324 PCOTHQ58A44 107 aa6.81□□□□□ -1.32
USP3-202ENST00000380324 Q5W150 140 aa6.78□□□□□ -1.32
USP3-202ENST00000380324 PKHD1L1Q86WI1 4243 aa6.78□□□□□ -1.32
USP3-202ENST00000380324 HSPG2P98160 4391 aa6.77□□□□□ -1.33
USP3-202ENST00000380324 RETNLBQ9BQ08 111 aa6.77□□□□□ -1.33
USP3-202ENST00000380324 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
USP3-202ENST00000380324 KRTAP16-1A8MUX0 517 aa6.75□□□□□ -1.33
USP3-202ENST00000380324 FAM229AH3BQW9 127 aa6.75□□□□□ -1.33
USP3-202ENST00000380324 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
USP3-202ENST00000380324 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
USP3-202ENST00000380324 CYP4F30PQ9H0H9 118 aa6.75□□□□□ -1.33
USP3-202ENST00000380324 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
USP3-202ENST00000380324 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
USP3-202ENST00000380324 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
USP3-202ENST00000380324 Q5VSD8 79 aa6.73□□□□□ -1.33
USP3-202ENST00000380324 FP248Q71RG6 208 aaPredicted RBP6.73□□□□□ -1.33
USP3-202ENST00000380324 LOC101927531A0A1B0GV80 90 aa6.71□□□□□ -1.33
USP3-202ENST00000380324 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.34
USP3-202ENST00000380324 C4orf26Q17RF5 130 aa6.71□□□□□ -1.34
USP3-202ENST00000380324 MPLKIPQ8TAP9 179 aa6.69□□□□□ -1.34
USP3-202ENST00000380324 IGLV7-46A0A075B6I9 117 aa6.68□□□□□ -1.34
USP3-202ENST00000380324 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
USP3-202ENST00000380324 RYR1P21817 5038 aa6.68□□□□□ -1.34
USP3-202ENST00000380324 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
USP3-202ENST00000380324 V9GYY9 64 aa6.66□□□□□ -1.34
USP3-202ENST00000380324 KIAA1109Q2LD37 5005 aa6.66□□□□□ -1.34
USP3-202ENST00000380324 TNXBP22105 4242 aa6.65□□□□□ -1.35
USP3-202ENST00000380324 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
USP3-202ENST00000380324 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
USP3-202ENST00000380324 IGKV2-30P06310 120 aa6.62□□□□□ -1.35
USP3-202ENST00000380324 COA5Q86WW8 74 aa6.62□□□□□ -1.35
USP3-202ENST00000380324 Q8N1X5 172 aa6.62□□□□□ -1.35
USP3-202ENST00000380324 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
USP3-202ENST00000380324 MYCBP2O75592 4640 aa6.6□□□□□ -1.35
USP3-202ENST00000380324 HRES1P13985 223 aa6.6□□□□□ -1.35
USP3-202ENST00000380324 DMBT1Q9UGM3 2413 aaPredicted RBP6.59□□□□□ -1.35
USP3-202ENST00000380324 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
USP3-202ENST00000380324 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
USP3-202ENST00000380324 Q1T7F1 81 aa6.54□□□□□ -1.36
USP3-202ENST00000380324 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
USP3-202ENST00000380324 PSPHP1O15172 72 aa6.53□□□□□ -1.36
USP3-202ENST00000380324 A8MUU9 505 aa6.52□□□□□ -1.37
USP3-202ENST00000380324 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
USP3-202ENST00000380324 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
USP3-202ENST00000380324 ACYP2P14621 99 aa6.49□□□□□ -1.37
USP3-202ENST00000380324 A8MUN3 132 aa6.47□□□□□ -1.37
USP3-202ENST00000380324 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
USP3-202ENST00000380324 CHKB-CPT1BH3BT56 60 aa6.45□□□□□ -1.38
USP3-202ENST00000380324 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
USP3-202ENST00000380324 Q75L30 129 aa6.44□□□□□ -1.38
USP3-202ENST00000380324 H3BS24 57 aa6.43□□□□□ -1.38
USP3-202ENST00000380324 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
USP3-202ENST00000380324 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
USP3-202ENST00000380324 Q5VV11 94 aa6.41□□□□□ -1.38
USP3-202ENST00000380324 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
USP3-202ENST00000380324 SPINK7P58062 85 aa6.4□□□□□ -1.38
USP3-202ENST00000380324 XP32Q5T750 250 aa6.37□□□□□ -1.39
USP3-202ENST00000380324 ATP11AUNQ6ZP68 121 aa6.37□□□□□ -1.39
USP3-202ENST00000380324 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
USP3-202ENST00000380324 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.39
USP3-202ENST00000380324 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
USP3-202ENST00000380324 ABCA13Q86UQ4 5058 aa6.32□□□□□ -1.4
USP3-202ENST00000380324 A6NED7 52 aa6.3□□□□□ -1.4
USP3-202ENST00000380324 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
USP3-202ENST00000380324 A8MU10 97 aa6.28□□□□□ -1.4
USP3-202ENST00000380324 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
USP3-202ENST00000380324 LPAP08519 4548 aa6.26□□□□□ -1.41
USP3-202ENST00000380324 A0A1B0GU69 56 aa6.26□□□□□ -1.41
USP3-202ENST00000380324 LRP2P98164 4655 aa6.25□□□□□ -1.41
USP3-202ENST00000380324 TPRXLQ17RH7 258 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms