RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 HRCT1Q6UXD1 115 aa12.36□□□□□ -0.43
RNF38-205ENST00000377877 HCG22E2RYF7 251 aa12.36□□□□□ -0.43
RNF38-205ENST00000377877 PRR26Q8N8Z3 221 aa12.35□□□□□ -0.43
RNF38-205ENST00000377877 SSBP3-AS1Q7Z2R9 100 aa12.33□□□□□ -0.44
RNF38-205ENST00000377877 LRP1Q07954 4544 aaKnown RBP12.31□□□□□ -0.44
RNF38-205ENST00000377877 A0A087WSZ3 146 aa12.3□□□□□ -0.44
RNF38-205ENST00000377877 KRTAP4-5Q9BYR2 181 aa12.29□□□□□ -0.44
RNF38-205ENST00000377877 FLG2Q5D862 2391 aaPredicted RBP12.28□□□□□ -0.44
RNF38-205ENST00000377877 FP248Q71RG6 208 aaPredicted RBP12.28□□□□□ -0.44
RNF38-205ENST00000377877 TYMSOSQ8TAI1 123 aa12.28□□□□□ -0.44
RNF38-205ENST00000377877 ZCCHC13Q8WW36 166 aaKnown RBP12.27□□□□□ -0.45
RNF38-205ENST00000377877 DEFB116Q30KQ4 102 aa12.23□□□□□ -0.45
RNF38-205ENST00000377877 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
RNF38-205ENST00000377877 WFDC13Q8IUB5 93 aa12.19□□□□□ -0.46
RNF38-205ENST00000377877 MYCBP2O75592 4640 aa12.19□□□□□ -0.46
RNF38-205ENST00000377877 HERC2O95714 4834 aa12.19□□□□□ -0.46
RNF38-205ENST00000377877 CD164Q04900 197 aa12.18□□□□□ -0.46
RNF38-205ENST00000377877 TNXBP22105 4242 aa12.17□□□□□ -0.46
RNF38-205ENST00000377877 KRTAP29-1A8MX34 341 aaPredicted RBP12.16□□□□□ -0.46
RNF38-205ENST00000377877 MP68P56378 58 aa12.16□□□□□ -0.46
RNF38-205ENST00000377877 PRR15Q8IV56 129 aa12.16□□□□□ -0.46
RNF38-205ENST00000377877 A8MWP4 228 aa12.15□□□□□ -0.46
RNF38-205ENST00000377877 NDUFB1O75438 58 aa12.15□□□□□ -0.46
RNF38-205ENST00000377877 LINC00472Q9H8W2 130 aa12.14□□□□□ -0.47
RNF38-205ENST00000377877 KRTAP10-8P60410 259 aa12.14□□□□□ -0.47
RNF38-205ENST00000377877 hDV103S1A0JD37 113 aa12.13□□□□□ -0.47
RNF38-205ENST00000377877 CASC2Q6XLA1 102 aa12.13□□□□□ -0.47
RNF38-205ENST00000377877 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
RNF38-205ENST00000377877 C4orf48Q5BLP8 95 aa12.11□□□□□ -0.47
RNF38-205ENST00000377877 H3BPC8 53 aa12.1□□□□□ -0.47
RNF38-205ENST00000377877 CYP4F30PQ9H0H9 118 aa12.1□□□□□ -0.47
RNF38-205ENST00000377877 ABCA13Q86UQ4 5058 aa12.1□□□□□ -0.47
RNF38-205ENST00000377877 Q96NJ1 140 aa12.08□□□□□ -0.48
RNF38-205ENST00000377877 TRAV22A0A0B4J277 110 aa12.07□□□□□ -0.48
RNF38-205ENST00000377877 SPINK1P00995 79 aa12.07□□□□□ -0.48
RNF38-205ENST00000377877 C1orf64Q8NEQ6 169 aa12.06□□□□□ -0.48
RNF38-205ENST00000377877 MPLKIPQ8TAP9 179 aa12.06□□□□□ -0.48
RNF38-205ENST00000377877 PRO0628Q9UI54 55 aa12.05□□□□□ -0.48
RNF38-205ENST00000377877 H0Y9P7 68 aa12.05□□□□□ -0.48
RNF38-205ENST00000377877 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
RNF38-205ENST00000377877 LINC00208Q96KT6 92 aa12.04□□□□□ -0.48
RNF38-205ENST00000377877 MT1HL1P0DM35 61 aa12.03□□□□□ -0.48
RNF38-205ENST00000377877 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
RNF38-205ENST00000377877 MMP24-AS1A0A0U1RRL7 71 aa11.99□□□□□ -0.49
RNF38-205ENST00000377877 ASB16-AS1Q495Z4 193 aa11.99□□□□□ -0.49
RNF38-205ENST00000377877 SPANXA2-OT1Q8N9U9 137 aa11.98□□□□□ -0.49
RNF38-205ENST00000377877 C1orf195Q5TG92 126 aa11.98□□□□□ -0.49
RNF38-205ENST00000377877 LIMD2Q9BT23 127 aa11.98□□□□□ -0.49
RNF38-205ENST00000377877 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.5
RNF38-205ENST00000377877 PRR4Q16378 134 aa11.95□□□□□ -0.5
RNF38-205ENST00000377877 Q1T7F1 81 aa11.95□□□□□ -0.5
RNF38-205ENST00000377877 BRK1Q8WUW1 75 aa11.9□□□□□ -0.5
RNF38-205ENST00000377877 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
RNF38-205ENST00000377877 RETNLBQ9BQ08 111 aa11.87□□□□□ -0.51
RNF38-205ENST00000377877 C8orf17Q9NRJ1 99 aa11.87□□□□□ -0.51
RNF38-205ENST00000377877 V9GYY9 64 aa11.85□□□□□ -0.51
RNF38-205ENST00000377877 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
RNF38-205ENST00000377877 IGHV6-1A0A0B4J1U7 121 aa11.81□□□□□ -0.52
RNF38-205ENST00000377877 NOTCH2NLQ7Z3S9 236 aa11.8□□□□□ -0.52
RNF38-205ENST00000377877 IGLV7-46A0A075B6I9 117 aa11.76□□□□□ -0.53
RNF38-205ENST00000377877 PCLOQ9Y6V0 5065 aa11.75□□□□□ -0.53
RNF38-205ENST00000377877 MRPL34Q9BQ48 92 aaKnown RBP11.74□□□□□ -0.53
RNF38-205ENST00000377877 NDUFS5O43920 106 aa11.73□□□□□ -0.53
RNF38-205ENST00000377877 J3QL48 77 aa11.72□□□□□ -0.53
RNF38-205ENST00000377877 PSPHP1O15172 72 aa11.72□□□□□ -0.53
RNF38-205ENST00000377877 COA5Q86WW8 74 aa11.68□□□□□ -0.54
RNF38-205ENST00000377877 PCOTHQ58A44 107 aa11.67□□□□□ -0.54
RNF38-205ENST00000377877 LINC00313P59037 77 aa11.67□□□□□ -0.54
RNF38-205ENST00000377877 A8MUN3 132 aa11.65□□□□□ -0.54
RNF38-205ENST00000377877 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
RNF38-205ENST00000377877 C8orf87E5RJ46 101 aa11.63□□□□□ -0.55
RNF38-205ENST00000377877 C9orf92A6NGG3 77 aa11.61□□□□□ -0.55
RNF38-205ENST00000377877 Q5VV11 94 aa11.6□□□□□ -0.55
RNF38-205ENST00000377877 LOC101927531A0A1B0GV80 90 aa11.59□□□□□ -0.55
RNF38-205ENST00000377877 KRTAP16-1A8MUX0 517 aa11.59□□□□□ -0.55
RNF38-205ENST00000377877 PRR15LQ9BU68 103 aa11.56□□□□□ -0.56
RNF38-205ENST00000377877 KRTAP13-3Q3SY46 172 aa11.5□□□□□ -0.57
RNF38-205ENST00000377877 CHKB-CPT1BH3BT56 60 aa11.5□□□□□ -0.57
RNF38-205ENST00000377877 Q75L30 129 aa11.49□□□□□ -0.57
RNF38-205ENST00000377877 HERC1Q15751 4861 aa11.47□□□□□ -0.57
RNF38-205ENST00000377877 HRES1P13985 223 aa11.47□□□□□ -0.57
RNF38-205ENST00000377877 Q5W150 140 aa11.47□□□□□ -0.57
RNF38-205ENST00000377877 LINC01558Q9Y6Z2 57 aa11.45□□□□□ -0.58
RNF38-205ENST00000377877 LPAP08519 4548 aa11.44□□□□□ -0.58
RNF38-205ENST00000377877 C20orf166-AS1Q96NR2 134 aa11.38□□□□□ -0.59
RNF38-205ENST00000377877 A8MUU9 505 aa11.37□□□□□ -0.59
RNF38-205ENST00000377877 XP32Q5T750 250 aa11.37□□□□□ -0.59
RNF38-205ENST00000377877 A6NED7 52 aa11.36□□□□□ -0.59
RNF38-205ENST00000377877 TPRXLQ17RH7 258 aa11.36□□□□□ -0.59
RNF38-205ENST00000377877 ACYP2P14621 99 aa11.33□□□□□ -0.6
RNF38-205ENST00000377877 LRP2P98164 4655 aa11.32□□□□□ -0.6
RNF38-205ENST00000377877 A8MU10 97 aa11.3□□□□□ -0.6
RNF38-205ENST00000377877 DMAC1Q96GE9 116 aa11.28□□□□□ -0.6
RNF38-205ENST00000377877 PMAIP1Q13794 54 aa11.28□□□□□ -0.6
RNF38-205ENST00000377877 IGKV2-30P06310 120 aa11.27□□□□□ -0.61
RNF38-205ENST00000377877 CDC42SE1Q9NRR8 79 aa11.27□□□□□ -0.61
RNF38-205ENST00000377877 LCA10Q71F78 164 aa11.27□□□□□ -0.61
RNF38-205ENST00000377877 ATP11AUNQ6ZP68 121 aa11.25□□□□□ -0.61
RNF38-205ENST00000377877 RPL37P61927 97 aaKnown RBP11.25□□□□□ -0.61
RNF38-205ENST00000377877 HMCN2Q8NDA2 5059 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms