RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 Q5XG85 94 aa12.63□□□□□ -0.39
RNF39-202ENST00000376751 FAM229BQ4G0N7 80 aa12.61□□□□□ -0.39
RNF39-202ENST00000376751 H3BPC8 53 aa12.59□□□□□ -0.39
RNF39-202ENST00000376751 DYNC1H1Q14204 4646 aaKnown RBP12.58□□□□□ -0.4
RNF39-202ENST00000376751 C1orf64Q8NEQ6 169 aa12.56□□□□□ -0.4
RNF39-202ENST00000376751 MRPL34Q9BQ48 92 aaKnown RBP12.56□□□□□ -0.4
RNF39-202ENST00000376751 PRR4Q16378 134 aa12.54□□□□□ -0.4
RNF39-202ENST00000376751 TP53AIP1Q9HCN2 124 aa12.54□□□□□ -0.4
RNF39-202ENST00000376751 FP248Q71RG6 208 aaPredicted RBP12.53□□□□□ -0.4
RNF39-202ENST00000376751 NDUFS5O43920 106 aa12.52□□□□□ -0.4
RNF39-202ENST00000376751 C4orf26Q17RF5 130 aa12.52□□□□□ -0.4
RNF39-202ENST00000376751 SMIM26A0A096LP01 95 aa12.52□□□□□ -0.41
RNF39-202ENST00000376751 LINC00336Q6ZUF6 198 aa12.5□□□□□ -0.41
RNF39-202ENST00000376751 RYR2Q92736 4967 aa12.5□□□□□ -0.41
RNF39-202ENST00000376751 CYP4F30PQ9H0H9 118 aa12.49□□□□□ -0.41
RNF39-202ENST00000376751 A0A1B0GVY2 172 aa12.49□□□□□ -0.41
RNF39-202ENST00000376751 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
RNF39-202ENST00000376751 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
RNF39-202ENST00000376751 SPANXA2-OT1Q8N9U9 137 aa12.42□□□□□ -0.42
RNF39-202ENST00000376751 APOBP04114 4563 aaKnown RBP12.42□□□□□ -0.42
RNF39-202ENST00000376751 C8orf87E5RJ46 101 aa12.41□□□□□ -0.42
RNF39-202ENST00000376751 SMR3BP02814 79 aaPredicted RBP12.41□□□□□ -0.42
RNF39-202ENST00000376751 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
RNF39-202ENST00000376751 PCOTHQ58A44 107 aa12.38□□□□□ -0.43
RNF39-202ENST00000376751 Q5W150 140 aa12.38□□□□□ -0.43
RNF39-202ENST00000376751 KRTAP13-3Q3SY46 172 aa12.37□□□□□ -0.43
RNF39-202ENST00000376751 LIMD2Q9BT23 127 aa12.36□□□□□ -0.43
RNF39-202ENST00000376751 LINC00313P59037 77 aa12.35□□□□□ -0.43
RNF39-202ENST00000376751 KMT2CQ8NEZ4 4911 aaKnown RBP12.34□□□□□ -0.43
RNF39-202ENST00000376751 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
RNF39-202ENST00000376751 FAT1Q14517 4588 aa12.33□□□□□ -0.44
RNF39-202ENST00000376751 MPLKIPQ8TAP9 179 aa12.32□□□□□ -0.44
RNF39-202ENST00000376751 KRTAP10-4P60372 401 aaPredicted RBP12.31□□□□□ -0.44
RNF39-202ENST00000376751 C4orf48Q5BLP8 95 aa12.3□□□□□ -0.44
RNF39-202ENST00000376751 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
RNF39-202ENST00000376751 KRTAP16-1A8MUX0 517 aa12.29□□□□□ -0.44
RNF39-202ENST00000376751 SPINK1P00995 79 aa12.27□□□□□ -0.44
RNF39-202ENST00000376751 Q8N9P0 234 aaPredicted RBP12.27□□□□□ -0.45
RNF39-202ENST00000376751 LOC101927531A0A1B0GV80 90 aa12.24□□□□□ -0.45
RNF39-202ENST00000376751 LINC00304Q8N9R0 145 aa12.24□□□□□ -0.45
RNF39-202ENST00000376751 PKHD1L1Q86WI1 4243 aa12.23□□□□□ -0.45
RNF39-202ENST00000376751 SVIPQ8NHG7 77 aa12.2□□□□□ -0.46
RNF39-202ENST00000376751 RETNLBQ9BQ08 111 aa12.19□□□□□ -0.46
RNF39-202ENST00000376751 FAM229AH3BQW9 127 aa12.16□□□□□ -0.46
RNF39-202ENST00000376751 Q1T7F1 81 aa12.16□□□□□ -0.46
RNF39-202ENST00000376751 COA5Q86WW8 74 aa12.16□□□□□ -0.46
RNF39-202ENST00000376751 RPS29P62273 56 aaKnown RBP12.15□□□□□ -0.46
RNF39-202ENST00000376751 SPAG11AQ6PDA7 123 aa12.12□□□□□ -0.47
RNF39-202ENST00000376751 IGKV2-30P06310 120 aa12.07□□□□□ -0.48
RNF39-202ENST00000376751 HRES1P13985 223 aa12.06□□□□□ -0.48
RNF39-202ENST00000376751 PSPHP1O15172 72 aa12.02□□□□□ -0.49
RNF39-202ENST00000376751 RYR3Q15413 4870 aa12.01□□□□□ -0.49
RNF39-202ENST00000376751 HSPG2P98160 4391 aa11.97□□□□□ -0.49
RNF39-202ENST00000376751 V9GYY9 64 aa11.97□□□□□ -0.49
RNF39-202ENST00000376751 A8MUN3 132 aa11.96□□□□□ -0.49
RNF39-202ENST00000376751 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
RNF39-202ENST00000376751 FLG2Q5D862 2391 aaPredicted RBP11.92□□□□□ -0.5
RNF39-202ENST00000376751 DMAC1Q96GE9 116 aa11.92□□□□□ -0.5
RNF39-202ENST00000376751 C9orf92A6NGG3 77 aa11.9□□□□□ -0.5
RNF39-202ENST00000376751 BRK1Q8WUW1 75 aa11.9□□□□□ -0.5
RNF39-202ENST00000376751 RYR1P21817 5038 aa11.89□□□□□ -0.51
RNF39-202ENST00000376751 Q5VV11 94 aa11.88□□□□□ -0.51
RNF39-202ENST00000376751 TNXBP22105 4242 aa11.88□□□□□ -0.51
RNF39-202ENST00000376751 LRP1Q07954 4544 aaKnown RBP11.88□□□□□ -0.51
RNF39-202ENST00000376751 PRO0628Q9UI54 55 aa11.87□□□□□ -0.51
RNF39-202ENST00000376751 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
RNF39-202ENST00000376751 ACYP2P14621 99 aa11.86□□□□□ -0.51
RNF39-202ENST00000376751 Q5VSD8 79 aa11.86□□□□□ -0.51
RNF39-202ENST00000376751 Q8N1X5 172 aa11.83□□□□□ -0.52
RNF39-202ENST00000376751 C20orf166-AS1Q96NR2 134 aa11.82□□□□□ -0.52
RNF39-202ENST00000376751 KRTAP17-1Q9BYP8 105 aa11.82□□□□□ -0.52
RNF39-202ENST00000376751 A8MUU9 505 aa11.81□□□□□ -0.52
RNF39-202ENST00000376751 LINC01558Q9Y6Z2 57 aa11.8□□□□□ -0.52
RNF39-202ENST00000376751 KRTAP10-8P60410 259 aa11.78□□□□□ -0.52
RNF39-202ENST00000376751 FAT3Q8TDW7 4589 aa11.77□□□□□ -0.53
RNF39-202ENST00000376751 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
RNF39-202ENST00000376751 Q75L30 129 aa11.73□□□□□ -0.53
RNF39-202ENST00000376751 CHKB-CPT1BH3BT56 60 aa11.72□□□□□ -0.53
RNF39-202ENST00000376751 KIAA1109Q2LD37 5005 aa11.71□□□□□ -0.54
RNF39-202ENST00000376751 A8MU10 97 aa11.66□□□□□ -0.54
RNF39-202ENST00000376751 DMBT1Q9UGM3 2413 aaPredicted RBP11.62□□□□□ -0.55
RNF39-202ENST00000376751 EPPK1P58107 5090 aaKnown RBP11.57□□□□□ -0.56
RNF39-202ENST00000376751 MYCBP2O75592 4640 aa11.57□□□□□ -0.56
RNF39-202ENST00000376751 A6NED7 52 aa11.57□□□□□ -0.56
RNF39-202ENST00000376751 SPINK7P58062 85 aa11.54□□□□□ -0.56
RNF39-202ENST00000376751 MT1HL1P0DM35 61 aa11.54□□□□□ -0.56
RNF39-202ENST00000376751 LCA10Q71F78 164 aa11.54□□□□□ -0.56
RNF39-202ENST00000376751 KRTAP3-1Q9BYR8 98 aa11.49□□□□□ -0.57
RNF39-202ENST00000376751 A0A1B0GU69 56 aa11.43□□□□□ -0.58
RNF39-202ENST00000376751 CDC42SE1Q9NRR8 79 aa11.43□□□□□ -0.58
RNF39-202ENST00000376751 XP32Q5T750 250 aa11.41□□□□□ -0.58
RNF39-202ENST00000376751 RPL37P61927 97 aaKnown RBP11.4□□□□□ -0.58
RNF39-202ENST00000376751 ATP11AUNQ6ZP68 121 aa11.37□□□□□ -0.59
RNF39-202ENST00000376751 COX6B2Q6YFQ2 88 aa11.31□□□□□ -0.6
RNF39-202ENST00000376751 SPTSSBQ8NFR3 76 aa11.31□□□□□ -0.6
RNF39-202ENST00000376751 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
RNF39-202ENST00000376751 PMAIP1Q13794 54 aa11.22□□□□□ -0.61
RNF39-202ENST00000376751 SPATA8Q6RVD6 105 aa11.16□□□□□ -0.62
RNF39-202ENST00000376751 UQCR11O14957 56 aa11.16□□□□□ -0.62
RNF39-202ENST00000376751 A6NN06 94 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms