RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 H3BPC8 53 aa11.86□□□□□ -0.51
VSX1-202ENST00000376709 A0A087X002 238 aa11.86□□□□□ -0.51
VSX1-202ENST00000376709 TRAV22A0A0B4J277 110 aa11.86□□□□□ -0.51
VSX1-202ENST00000376709 VPS13BQ7Z7G8 4022 aa11.86□□□□□ -0.51
VSX1-202ENST00000376709 PRR4Q16378 134 aa11.84□□□□□ -0.51
VSX1-202ENST00000376709 TP53AIP1Q9HCN2 124 aa11.83□□□□□ -0.52
VSX1-202ENST00000376709 NDUFS5O43920 106 aa11.82□□□□□ -0.52
VSX1-202ENST00000376709 RYR2Q92736 4967 aa11.82□□□□□ -0.52
VSX1-202ENST00000376709 C1orf64Q8NEQ6 169 aa11.82□□□□□ -0.52
VSX1-202ENST00000376709 KRTAP13-2Q52LG2 175 aa11.81□□□□□ -0.52
VSX1-202ENST00000376709 LINC00336Q6ZUF6 198 aa11.79□□□□□ -0.52
VSX1-202ENST00000376709 NOTCH2NLQ7Z3S9 236 aa11.79□□□□□ -0.52
VSX1-202ENST00000376709 MRPL34Q9BQ48 92 aaKnown RBP11.79□□□□□ -0.52
VSX1-202ENST00000376709 DYNC1H1Q14204 4646 aaKnown RBP11.79□□□□□ -0.52
VSX1-202ENST00000376709 KMT2CQ8NEZ4 4911 aaKnown RBP11.76□□□□□ -0.53
VSX1-202ENST00000376709 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
VSX1-202ENST00000376709 KRTAP1-4P0C5Y4 121 aa11.74□□□□□ -0.53
VSX1-202ENST00000376709 MPLKIPQ8TAP9 179 aa11.74□□□□□ -0.53
VSX1-202ENST00000376709 A0A1B0GVY2 172 aa11.71□□□□□ -0.53
VSX1-202ENST00000376709 PLA2G1BP04054 148 aaKnown RBP11.69□□□□□ -0.54
VSX1-202ENST00000376709 SPANXA2-OT1Q8N9U9 137 aa11.69□□□□□ -0.54
VSX1-202ENST00000376709 C8orf87E5RJ46 101 aa11.66□□□□□ -0.54
VSX1-202ENST00000376709 C1orf195Q5TG92 126 aa11.65□□□□□ -0.54
VSX1-202ENST00000376709 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
VSX1-202ENST00000376709 APOBP04114 4563 aaKnown RBP11.64□□□□□ -0.55
VSX1-202ENST00000376709 PCOTHQ58A44 107 aa11.62□□□□□ -0.55
VSX1-202ENST00000376709 TYMSOSQ8TAI1 123 aa11.62□□□□□ -0.55
VSX1-202ENST00000376709 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
VSX1-202ENST00000376709 C4orf48Q5BLP8 95 aa11.62□□□□□ -0.55
VSX1-202ENST00000376709 LINC00313P59037 77 aa11.61□□□□□ -0.55
VSX1-202ENST00000376709 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
VSX1-202ENST00000376709 FAT1Q14517 4588 aa11.55□□□□□ -0.56
VSX1-202ENST00000376709 Q5W150 140 aa11.55□□□□□ -0.56
VSX1-202ENST00000376709 SPINK1P00995 79 aa11.54□□□□□ -0.56
VSX1-202ENST00000376709 LOC101927531A0A1B0GV80 90 aa11.52□□□□□ -0.57
VSX1-202ENST00000376709 Q1T7F1 81 aa11.51□□□□□ -0.57
VSX1-202ENST00000376709 PRR26Q8N8Z3 221 aa11.51□□□□□ -0.57
VSX1-202ENST00000376709 KRTAP13-3Q3SY46 172 aa11.5□□□□□ -0.57
VSX1-202ENST00000376709 Q8N9P0 234 aaPredicted RBP11.48□□□□□ -0.57
VSX1-202ENST00000376709 RYR3Q15413 4870 aa11.47□□□□□ -0.57
VSX1-202ENST00000376709 LINC00304Q8N9R0 145 aa11.47□□□□□ -0.57
VSX1-202ENST00000376709 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
VSX1-202ENST00000376709 KRTAP10-4P60372 401 aaPredicted RBP11.45□□□□□ -0.58
VSX1-202ENST00000376709 COA5Q86WW8 74 aa11.45□□□□□ -0.58
VSX1-202ENST00000376709 KRTAP16-1A8MUX0 517 aa11.43□□□□□ -0.58
VSX1-202ENST00000376709 PSPHP1O15172 72 aa11.42□□□□□ -0.58
VSX1-202ENST00000376709 RETNLBQ9BQ08 111 aa11.42□□□□□ -0.58
VSX1-202ENST00000376709 BRK1Q8WUW1 75 aa11.41□□□□□ -0.58
VSX1-202ENST00000376709 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
VSX1-202ENST00000376709 RPS29P62273 56 aaKnown RBP11.39□□□□□ -0.59
VSX1-202ENST00000376709 PRO0628Q9UI54 55 aa11.39□□□□□ -0.59
VSX1-202ENST00000376709 V9GYY9 64 aa11.35□□□□□ -0.59
VSX1-202ENST00000376709 A8MUN3 132 aa11.34□□□□□ -0.59
VSX1-202ENST00000376709 HRES1P13985 223 aa11.31□□□□□ -0.6
VSX1-202ENST00000376709 PKHD1L1Q86WI1 4243 aa11.31□□□□□ -0.6
VSX1-202ENST00000376709 IGKV2-30P06310 120 aa11.3□□□□□ -0.6
VSX1-202ENST00000376709 HSPG2P98160 4391 aa11.28□□□□□ -0.6
VSX1-202ENST00000376709 Q5VV11 94 aa11.26□□□□□ -0.61
VSX1-202ENST00000376709 PRR15LQ9BU68 103 aa11.24□□□□□ -0.61
VSX1-202ENST00000376709 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
VSX1-202ENST00000376709 ACYP2P14621 99 aa11.21□□□□□ -0.62
VSX1-202ENST00000376709 RYR1P21817 5038 aa11.2□□□□□ -0.62
VSX1-202ENST00000376709 DMAC1Q96GE9 116 aa11.18□□□□□ -0.62
VSX1-202ENST00000376709 Q5VSD8 79 aa11.16□□□□□ -0.62
VSX1-202ENST00000376709 C9orf92A6NGG3 77 aa11.14□□□□□ -0.63
VSX1-202ENST00000376709 CHKB-CPT1BH3BT56 60 aa11.14□□□□□ -0.63
VSX1-202ENST00000376709 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
VSX1-202ENST00000376709 LINC01558Q9Y6Z2 57 aa11.11□□□□□ -0.63
VSX1-202ENST00000376709 Q75L30 129 aa11.09□□□□□ -0.63
VSX1-202ENST00000376709 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
VSX1-202ENST00000376709 TNXBP22105 4242 aa11.08□□□□□ -0.64
VSX1-202ENST00000376709 A8MU10 97 aa11.07□□□□□ -0.64
VSX1-202ENST00000376709 C7orf65Q6ZTY9 151 aa11.07□□□□□ -0.64
VSX1-202ENST00000376709 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
VSX1-202ENST00000376709 EPPK1P58107 5090 aaKnown RBP11.05□□□□□ -0.64
VSX1-202ENST00000376709 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
VSX1-202ENST00000376709 A8MUU9 505 aa11.03□□□□□ -0.64
VSX1-202ENST00000376709 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.64
VSX1-202ENST00000376709 Q8N1X5 172 aa11.01□□□□□ -0.65
VSX1-202ENST00000376709 A6NED7 52 aa11□□□□□ -0.65
VSX1-202ENST00000376709 FAT3Q8TDW7 4589 aa10.99□□□□□ -0.65
VSX1-202ENST00000376709 KRTAP10-8P60410 259 aa10.98□□□□□ -0.65
VSX1-202ENST00000376709 LCA10Q71F78 164 aa10.93□□□□□ -0.66
VSX1-202ENST00000376709 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
VSX1-202ENST00000376709 SPINK7P58062 85 aa10.9□□□□□ -0.66
VSX1-202ENST00000376709 CDC42SE1Q9NRR8 79 aa10.85□□□□□ -0.67
VSX1-202ENST00000376709 A0A1B0GU69 56 aa10.81□□□□□ -0.68
VSX1-202ENST00000376709 SPTSSBQ8NFR3 76 aa10.81□□□□□ -0.68
VSX1-202ENST00000376709 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
VSX1-202ENST00000376709 MT1HL1P0DM35 61 aa10.77□□□□□ -0.68
VSX1-202ENST00000376709 PMAIP1Q13794 54 aa10.76□□□□□ -0.69
VSX1-202ENST00000376709 ATP11AUNQ6ZP68 121 aa10.75□□□□□ -0.69
VSX1-202ENST00000376709 KRTAP3-1Q9BYR8 98 aa10.67□□□□□ -0.7
VSX1-202ENST00000376709 RPL37P61927 97 aaKnown RBP10.65□□□□□ -0.7
VSX1-202ENST00000376709 KRTAP4-5Q9BYR2 181 aa10.65□□□□□ -0.7
VSX1-202ENST00000376709 XP32Q5T750 250 aa10.64□□□□□ -0.71
VSX1-202ENST00000376709 COX6B2Q6YFQ2 88 aa10.6□□□□□ -0.71
VSX1-202ENST00000376709 A6NN06 94 aa10.59□□□□□ -0.71
VSX1-202ENST00000376709 SEC61GP60059 68 aa10.58□□□□□ -0.72
VSX1-202ENST00000376709 UQCR11O14957 56 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms