RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 PRR15Q8IV56 129 aa9.63□□□□□ -0.87
HLA-DMA-201ENST00000374843 NDUFB1O75438 58 aa9.62□□□□□ -0.87
HLA-DMA-201ENST00000374843 Q8N9L7 120 aa9.61□□□□□ -0.87
HLA-DMA-201ENST00000374843 IMUPQ9GZP8 106 aa9.61□□□□□ -0.87
HLA-DMA-201ENST00000374843 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
HLA-DMA-201ENST00000374843 C8orf87E5RJ46 101 aa9.56□□□□□ -0.88
HLA-DMA-201ENST00000374843 MMP24-AS1A0A0U1RRL7 71 aa9.54□□□□□ -0.88
HLA-DMA-201ENST00000374843 HIST1H4AP62805 103 aaKnown RBP9.54□□□□□ -0.88
HLA-DMA-201ENST00000374843 C8orf17Q9NRJ1 99 aa9.54□□□□□ -0.88
HLA-DMA-201ENST00000374843 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
HLA-DMA-201ENST00000374843 HERC1Q15751 4861 aa9.53□□□□□ -0.88
HLA-DMA-201ENST00000374843 A0A087WVE0 104 aa9.51□□□□□ -0.89
HLA-DMA-201ENST00000374843 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
HLA-DMA-201ENST00000374843 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
HLA-DMA-201ENST00000374843 PRR4Q16378 134 aa9.5□□□□□ -0.89
HLA-DMA-201ENST00000374843 LINC00313P59037 77 aa9.48□□□□□ -0.89
HLA-DMA-201ENST00000374843 KRTAP13-3Q3SY46 172 aa9.48□□□□□ -0.89
HLA-DMA-201ENST00000374843 KRTAP16-1A8MUX0 517 aa9.47□□□□□ -0.89
HLA-DMA-201ENST00000374843 TPRXLQ17RH7 258 aa9.47□□□□□ -0.89
HLA-DMA-201ENST00000374843 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
HLA-DMA-201ENST00000374843 HMCN2Q8NDA2 5059 aa9.45□□□□□ -0.9
HLA-DMA-201ENST00000374843 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
HLA-DMA-201ENST00000374843 CASC2Q6XLA1 102 aa9.45□□□□□ -0.9
HLA-DMA-201ENST00000374843 WFDC13Q8IUB5 93 aa9.43□□□□□ -0.9
HLA-DMA-201ENST00000374843 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
HLA-DMA-201ENST00000374843 MRPL34Q9BQ48 92 aaKnown RBP9.41□□□□□ -0.9
HLA-DMA-201ENST00000374843 FAM236AA0A1B0GUQ0 79 aa9.39□□□□□ -0.91
HLA-DMA-201ENST00000374843 FAM236BA0A1B0GV22 79 aa9.39□□□□□ -0.91
HLA-DMA-201ENST00000374843 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
HLA-DMA-201ENST00000374843 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
HLA-DMA-201ENST00000374843 A8MUU9 505 aa9.35□□□□□ -0.91
HLA-DMA-201ENST00000374843 XP32Q5T750 250 aa9.35□□□□□ -0.91
HLA-DMA-201ENST00000374843 SCGB1A1P11684 91 aa9.33□□□□□ -0.92
HLA-DMA-201ENST00000374843 Q75L30 129 aa9.33□□□□□ -0.92
HLA-DMA-201ENST00000374843 LPAP08519 4548 aa9.32□□□□□ -0.92
HLA-DMA-201ENST00000374843 ATOX1O00244 68 aa9.3□□□□□ -0.92
HLA-DMA-201ENST00000374843 OCR1Q9BZK8 76 aa9.3□□□□□ -0.92
HLA-DMA-201ENST00000374843 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
HLA-DMA-201ENST00000374843 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
HLA-DMA-201ENST00000374843 LRP2P98164 4655 aa9.26□□□□□ -0.93
HLA-DMA-201ENST00000374843 NDUFS5O43920 106 aa9.26□□□□□ -0.93
HLA-DMA-201ENST00000374843 SMIM20Q8N5G0 67 aa9.26□□□□□ -0.93
HLA-DMA-201ENST00000374843 UQCRQO14949 82 aa9.23□□□□□ -0.93
HLA-DMA-201ENST00000374843 TRAV7A0A075B6U4 112 aa9.21□□□□□ -0.94
HLA-DMA-201ENST00000374843 MUC17Q685J3 4493 aa9.2□□□□□ -0.94
HLA-DMA-201ENST00000374843 ZCCHC13Q8WW36 166 aaKnown RBP9.2□□□□□ -0.94
HLA-DMA-201ENST00000374843 Q5W150 140 aa9.17□□□□□ -0.94
HLA-DMA-201ENST00000374843 SERP2Q8N6R1 65 aa9.16□□□□□ -0.94
HLA-DMA-201ENST00000374843 TRAV22A0A0B4J277 110 aa9.15□□□□□ -0.94
HLA-DMA-201ENST00000374843 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
HLA-DMA-201ENST00000374843 C5orf47Q569G3 176 aa9.12□□□□□ -0.95
HLA-DMA-201ENST00000374843 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
HLA-DMA-201ENST00000374843 H0Y9P7 68 aa9.11□□□□□ -0.95
HLA-DMA-201ENST00000374843 SEC61BP60468 96 aaKnown RBP9.11□□□□□ -0.95
HLA-DMA-201ENST00000374843 PCOTHQ58A44 107 aa9.09□□□□□ -0.95
HLA-DMA-201ENST00000374843 COX7CP15954 63 aa9.08□□□□□ -0.96
HLA-DMA-201ENST00000374843 MP68P56378 58 aa9.08□□□□□ -0.96
HLA-DMA-201ENST00000374843 H3BPC8 53 aa9.07□□□□□ -0.96
HLA-DMA-201ENST00000374843 LOC101927531A0A1B0GV80 90 aa9.03□□□□□ -0.96
HLA-DMA-201ENST00000374843 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
HLA-DMA-201ENST00000374843 A0A0U1RQV1 116 aa9.02□□□□□ -0.97
HLA-DMA-201ENST00000374843 LINC00208Q96KT6 92 aa9.01□□□□□ -0.97
HLA-DMA-201ENST00000374843 C7orf65Q6ZTY9 151 aa9□□□□□ -0.97
HLA-DMA-201ENST00000374843 C1orf64Q8NEQ6 169 aa9□□□□□ -0.97
HLA-DMA-201ENST00000374843 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
HLA-DMA-201ENST00000374843 SPINK7P58062 85 aa8.97□□□□□ -0.97
HLA-DMA-201ENST00000374843 KLKP1Q107X0 134 aa8.97□□□□□ -0.97
HLA-DMA-201ENST00000374843 C20orf197Q8N268 126 aa8.97□□□□□ -0.97
HLA-DMA-201ENST00000374843 CYP4F30PQ9H0H9 118 aa8.97□□□□□ -0.97
HLA-DMA-201ENST00000374843 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
HLA-DMA-201ENST00000374843 CCDC179H3BU77 68 aa8.92□□□□□ -0.98
HLA-DMA-201ENST00000374843 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
HLA-DMA-201ENST00000374843 KRTAP4-1Q9BYQ7 146 aa8.91□□□□□ -0.98
HLA-DMA-201ENST00000374843 RNF213Q63HN8 5207 aa8.88□□□□□ -0.99
HLA-DMA-201ENST00000374843 HRES1P13985 223 aa8.87□□□□□ -0.99
HLA-DMA-201ENST00000374843 PCP4P48539 62 aa8.86□□□□□ -0.99
HLA-DMA-201ENST00000374843 CYSTM1Q9H1C7 97 aa8.85□□□□□ -0.99
HLA-DMA-201ENST00000374843 NDUFC1O43677 76 aa8.84□□□□□ -0.99
HLA-DMA-201ENST00000374843 MPLKIPQ8TAP9 179 aa8.83□□□□□ -1
HLA-DMA-201ENST00000374843 H7BZZ5 65 aa8.8□□□□□ -1
HLA-DMA-201ENST00000374843 MUC2Q02817 5179 aa8.76□□□□□ -1.01
HLA-DMA-201ENST00000374843 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
HLA-DMA-201ENST00000374843 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
HLA-DMA-201ENST00000374843 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
HLA-DMA-201ENST00000374843 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.02
HLA-DMA-201ENST00000374843 KRTAP19-2Q3LHN2 52 aa8.7□□□□□ -1.02
HLA-DMA-201ENST00000374843 A8MUN3 132 aa8.67□□□□□ -1.02
HLA-DMA-201ENST00000374843 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
HLA-DMA-201ENST00000374843 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
HLA-DMA-201ENST00000374843 TMEM258P61165 79 aa8.65□□□□□ -1.02
HLA-DMA-201ENST00000374843 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
HLA-DMA-201ENST00000374843 FAM236DA0A1B0GTK5 79 aa8.6□□□□□ -1.03
HLA-DMA-201ENST00000374843 FAM236CP0DP71 79 aa8.6□□□□□ -1.03
HLA-DMA-201ENST00000374843 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
HLA-DMA-201ENST00000374843 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
HLA-DMA-201ENST00000374843 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
HLA-DMA-201ENST00000374843 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
HLA-DMA-201ENST00000374843 ACYP2P14621 99 aa8.53□□□□□ -1.04
HLA-DMA-201ENST00000374843 S4R3F8 94 aa8.46□□□□□ -1.06
HLA-DMA-201ENST00000374843 COA5Q86WW8 74 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1284.2 ms