RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 FBN1P35555 2871 aaKnown RBP4.6□□□□□ -1.67
USP48-203ENST00000374732 JMJD1CQ15652 2540 aa4.6□□□□□ -1.67
USP48-203ENST00000374732 GVQW2A0A096LPI5 108 aaPredicted RBP4.6□□□□□ -1.67
USP48-203ENST00000374732 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
USP48-203ENST00000374732 TYMSOSQ8TAI1 123 aa4.59□□□□□ -1.67
USP48-203ENST00000374732 KRTAP10-11P60412 298 aa4.59□□□□□ -1.67
USP48-203ENST00000374732 CLPSL2Q6UWE3 100 aa4.59□□□□□ -1.67
USP48-203ENST00000374732 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
USP48-203ENST00000374732 DEFB131BA0A096LNP1 70 aa4.58□□□□□ -1.68
USP48-203ENST00000374732 NOTCH2Q04721 2471 aa4.57□□□□□ -1.68
USP48-203ENST00000374732 SETD2Q9BYW2 2564 aaPredicted RBP4.57□□□□□ -1.68
USP48-203ENST00000374732 HTN3P15516 51 aa4.57□□□□□ -1.68
USP48-203ENST00000374732 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
USP48-203ENST00000374732 VWFP04275 2813 aa4.55□□□□□ -1.68
USP48-203ENST00000374732 UNQ6190/PRO20217Q6UXQ8 127 aa4.54□□□□□ -1.68
USP48-203ENST00000374732 A0A0G2JQZ4 141 aa4.54□□□□□ -1.68
USP48-203ENST00000374732 LINC01556Q5JQF7 62 aa4.54□□□□□ -1.68
USP48-203ENST00000374732 R4GN34 69 aa4.54□□□□□ -1.68
USP48-203ENST00000374732 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
USP48-203ENST00000374732 IGLV6-57P01721 117 aa4.54□□□□□ -1.68
USP48-203ENST00000374732 TENM1Q9UKZ4 2725 aa4.53□□□□□ -1.68
USP48-203ENST00000374732 C6orf48Q9UBA6 75 aa4.52□□□□□ -1.69
USP48-203ENST00000374732 K7EIL1 84 aa4.51□□□□□ -1.69
USP48-203ENST00000374732 KRTAP29-1A8MX34 341 aaPredicted RBP4.51□□□□□ -1.69
USP48-203ENST00000374732 NBEAL2Q6ZNJ1 2754 aa4.5□□□□□ -1.69
USP48-203ENST00000374732 MEGF8Q7Z7M0 2845 aa4.49□□□□□ -1.69
USP48-203ENST00000374732 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
USP48-203ENST00000374732 SPACA4Q8TDM5 124 aa4.48□□□□□ -1.69
USP48-203ENST00000374732 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
USP48-203ENST00000374732 PSORS1C2Q9UIG4 136 aa4.48□□□□□ -1.69
USP48-203ENST00000374732 ATRQ13535 2644 aa4.48□□□□□ -1.69
USP48-203ENST00000374732 TRRAPQ9Y4A5 3859 aa4.48□□□□□ -1.69
USP48-203ENST00000374732 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
USP48-203ENST00000374732 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
USP48-203ENST00000374732 DNAH9Q9NYC9 4486 aa4.45□□□□□ -1.7
USP48-203ENST00000374732 IGKV2-24A0A0C4DH68 120 aa4.45□□□□□ -1.7
USP48-203ENST00000374732 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
USP48-203ENST00000374732 COL6A5A8TX70 2615 aa4.43□□□□□ -1.7
USP48-203ENST00000374732 IGLV5-48A0A075B6I7 105 aa4.41□□□□□ -1.7
USP48-203ENST00000374732 C14orf177Q52M58 125 aa4.41□□□□□ -1.7
USP48-203ENST00000374732 Q6ZRX8 168 aa4.4□□□□□ -1.71
USP48-203ENST00000374732 RYR2Q92736 4967 aa4.4□□□□□ -1.71
USP48-203ENST00000374732 SPRR1AP35321 89 aa4.39□□□□□ -1.71
USP48-203ENST00000374732 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
USP48-203ENST00000374732 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
USP48-203ENST00000374732 H0YAA0 97 aa4.36□□□□□ -1.71
USP48-203ENST00000374732 PKD1L1Q8TDX9 2849 aa4.36□□□□□ -1.71
USP48-203ENST00000374732 STAB1Q9NY15 2570 aa4.36□□□□□ -1.71
USP48-203ENST00000374732 APLNQ9ULZ1 77 aa4.35□□□□□ -1.71
USP48-203ENST00000374732 TENM3Q9P273 2699 aa4.35□□□□□ -1.71
USP48-203ENST00000374732 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
USP48-203ENST00000374732 LY6G6CO95867 125 aa4.35□□□□□ -1.71
USP48-203ENST00000374732 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
USP48-203ENST00000374732 TP53AIP1Q9HCN2 124 aa4.35□□□□□ -1.71
USP48-203ENST00000374732 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
USP48-203ENST00000374732 SACSQ9NZJ4 4579 aa4.32□□□□□ -1.72
USP48-203ENST00000374732 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
USP48-203ENST00000374732 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
USP48-203ENST00000374732 LYSTQ99698 3801 aa4.31□□□□□ -1.72
USP48-203ENST00000374732 UBE2DNLQ8IWF7 75 aa4.31□□□□□ -1.72
USP48-203ENST00000374732 HERC2O95714 4834 aa4.31□□□□□ -1.72
USP48-203ENST00000374732 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
USP48-203ENST00000374732 LCE2CQ5TA81 110 aa4.3□□□□□ -1.72
USP48-203ENST00000374732 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
USP48-203ENST00000374732 RYR3Q15413 4870 aa4.3□□□□□ -1.72
USP48-203ENST00000374732 A0A096LNI7 61 aa4.29□□□□□ -1.72
USP48-203ENST00000374732 NBEAL1Q6ZS30 2694 aa4.28□□□□□ -1.72
USP48-203ENST00000374732 Q6ZSA8 131 aa4.27□□□□□ -1.73
USP48-203ENST00000374732 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
USP48-203ENST00000374732 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
USP48-203ENST00000374732 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
USP48-203ENST00000374732 PLECQ15149 4684 aaKnown RBP4.26□□□□□ -1.73
USP48-203ENST00000374732 SPRR1BP22528 89 aa4.25□□□□□ -1.73
USP48-203ENST00000374732 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
USP48-203ENST00000374732 A0A1B0GVY2 172 aa4.24□□□□□ -1.73
USP48-203ENST00000374732 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
USP48-203ENST00000374732 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
USP48-203ENST00000374732 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
USP48-203ENST00000374732 DYNC1H1Q14204 4646 aaKnown RBP4.23□□□□□ -1.73
USP48-203ENST00000374732 HECTD4Q9Y4D8 3996 aa4.23□□□□□ -1.73
USP48-203ENST00000374732 COL7A1Q02388 2944 aa4.21□□□□□ -1.73
USP48-203ENST00000374732 MGAM2Q2M2H8 2515 aa4.21□□□□□ -1.74
USP48-203ENST00000374732 PRLHP81277 87 aa4.21□□□□□ -1.74
USP48-203ENST00000374732 KRTAP13-1Q8IUC0 172 aa4.2□□□□□ -1.74
USP48-203ENST00000374732 MRPL34Q9BQ48 92 aaKnown RBP4.2□□□□□ -1.74
USP48-203ENST00000374732 ANAPC11Q9NYG5 84 aa4.2□□□□□ -1.74
USP48-203ENST00000374732 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
USP48-203ENST00000374732 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
USP48-203ENST00000374732 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
USP48-203ENST00000374732 SRRM2Q9UQ35 2752 aaKnown RBP4.17□□□□□ -1.74
USP48-203ENST00000374732 DNAH2Q9P225 4427 aa4.17□□□□□ -1.74
USP48-203ENST00000374732 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
USP48-203ENST00000374732 CSMD3Q7Z407 3707 aa4.16□□□□□ -1.74
USP48-203ENST00000374732 STAB2Q8WWQ8 2551 aa4.16□□□□□ -1.74
USP48-203ENST00000374732 KMT2AQ03164 3969 aa4.12□□□□□ -1.75
USP48-203ENST00000374732 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
USP48-203ENST00000374732 FRAS1Q86XX4 4008 aa4.11□□□□□ -1.75
USP48-203ENST00000374732 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
USP48-203ENST00000374732 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
USP48-203ENST00000374732 SPINK1P00995 79 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms