RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 LINC00313P59037 77 aa6.6□□□□□ -1.35
CXCL12-203ENST00000374429 SPACA4Q8TDM5 124 aa6.59□□□□□ -1.35
CXCL12-203ENST00000374429 CASC2Q6XLA1 102 aa6.59□□□□□ -1.36
CXCL12-203ENST00000374429 DNAH1Q9P2D7 4330 aa6.58□□□□□ -1.36
CXCL12-203ENST00000374429 LOC101927531A0A1B0GV80 90 aa6.57□□□□□ -1.36
CXCL12-203ENST00000374429 SPAG11AQ6PDA7 123 aa6.56□□□□□ -1.36
CXCL12-203ENST00000374429 Q75L30 129 aa6.56□□□□□ -1.36
CXCL12-203ENST00000374429 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
CXCL12-203ENST00000374429 WWC2-AS2Q96NR7 200 aa6.55□□□□□ -1.36
CXCL12-203ENST00000374429 ADM2Q7Z4H4 148 aa6.54□□□□□ -1.36
CXCL12-203ENST00000374429 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
CXCL12-203ENST00000374429 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
CXCL12-203ENST00000374429 DNAH6Q9C0G6 4158 aa6.53□□□□□ -1.36
CXCL12-203ENST00000374429 ZNF861PO60384 105 aa6.53□□□□□ -1.36
CXCL12-203ENST00000374429 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
CXCL12-203ENST00000374429 VPS13DQ5THJ4 4388 aa6.52□□□□□ -1.37
CXCL12-203ENST00000374429 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
CXCL12-203ENST00000374429 Q6ZR54 194 aa6.51□□□□□ -1.37
CXCL12-203ENST00000374429 A0A087X002 238 aa6.51□□□□□ -1.37
CXCL12-203ENST00000374429 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
CXCL12-203ENST00000374429 H0Y9P7 68 aa6.5□□□□□ -1.37
CXCL12-203ENST00000374429 COA5Q86WW8 74 aa6.49□□□□□ -1.37
CXCL12-203ENST00000374429 SPINK7P58062 85 aa6.49□□□□□ -1.37
CXCL12-203ENST00000374429 IGLV7-43P04211 117 aa6.49□□□□□ -1.37
CXCL12-203ENST00000374429 DNAH2Q9P225 4427 aa6.48□□□□□ -1.37
CXCL12-203ENST00000374429 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.37
CXCL12-203ENST00000374429 A8MWP4 228 aa6.45□□□□□ -1.38
CXCL12-203ENST00000374429 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
CXCL12-203ENST00000374429 LCE6AA0A183 80 aa6.45□□□□□ -1.38
CXCL12-203ENST00000374429 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
CXCL12-203ENST00000374429 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
CXCL12-203ENST00000374429 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
CXCL12-203ENST00000374429 DNAH17Q9UFH2 4485 aa6.4□□□□□ -1.38
CXCL12-203ENST00000374429 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.38
CXCL12-203ENST00000374429 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.39
CXCL12-203ENST00000374429 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
CXCL12-203ENST00000374429 LRP1BQ9NZR2 4599 aa6.38□□□□□ -1.39
CXCL12-203ENST00000374429 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
CXCL12-203ENST00000374429 CSAG1Q6PB30 78 aa6.37□□□□□ -1.39
CXCL12-203ENST00000374429 PKHD1P08F94 4074 aa6.37□□□□□ -1.39
CXCL12-203ENST00000374429 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
CXCL12-203ENST00000374429 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
CXCL12-203ENST00000374429 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
CXCL12-203ENST00000374429 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
CXCL12-203ENST00000374429 C9orf92A6NGG3 77 aa6.36□□□□□ -1.39
CXCL12-203ENST00000374429 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CXCL12-203ENST00000374429 SPRR1BP22528 89 aa6.36□□□□□ -1.39
CXCL12-203ENST00000374429 IGLV8-61A0A075B6I0 122 aa6.36□□□□□ -1.39
CXCL12-203ENST00000374429 FAT1Q14517 4588 aa6.35□□□□□ -1.39
CXCL12-203ENST00000374429 A0A1B0GVX0 72 aa6.35□□□□□ -1.39
CXCL12-203ENST00000374429 A0A1B0GW54 56 aa6.33□□□□□ -1.4
CXCL12-203ENST00000374429 SPINK1P00995 79 aa6.31□□□□□ -1.4
CXCL12-203ENST00000374429 Q96NJ1 140 aa6.31□□□□□ -1.4
CXCL12-203ENST00000374429 MRPL34Q9BQ48 92 aaKnown RBP6.31□□□□□ -1.4
CXCL12-203ENST00000374429 KRTAP13-2Q52LG2 175 aa6.31□□□□□ -1.4
CXCL12-203ENST00000374429 KRTAP29-1A8MX34 341 aaPredicted RBP6.3□□□□□ -1.4
CXCL12-203ENST00000374429 H3BPC8 53 aa6.29□□□□□ -1.4
CXCL12-203ENST00000374429 Q5W150 140 aa6.29□□□□□ -1.4
CXCL12-203ENST00000374429 IGLV7-46A0A075B6I9 117 aa6.27□□□□□ -1.41
CXCL12-203ENST00000374429 LINC00483Q53H64 154 aa6.26□□□□□ -1.41
CXCL12-203ENST00000374429 DYNC2H1Q8NCM8 4307 aaKnown RBP6.26□□□□□ -1.41
CXCL12-203ENST00000374429 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
CXCL12-203ENST00000374429 FAT2Q9NYQ8 4349 aa6.25□□□□□ -1.41
CXCL12-203ENST00000374429 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
CXCL12-203ENST00000374429 KMT2CQ8NEZ4 4911 aaKnown RBP6.25□□□□□ -1.41
CXCL12-203ENST00000374429 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
CXCL12-203ENST00000374429 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
CXCL12-203ENST00000374429 HRES1P13985 223 aa6.21□□□□□ -1.42
CXCL12-203ENST00000374429 A0A1B0GU69 56 aa6.2□□□□□ -1.42
CXCL12-203ENST00000374429 LINC00304Q8N9R0 145 aa6.2□□□□□ -1.42
CXCL12-203ENST00000374429 Q8N1X5 172 aa6.19□□□□□ -1.42
CXCL12-203ENST00000374429 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
CXCL12-203ENST00000374429 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
CXCL12-203ENST00000374429 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
CXCL12-203ENST00000374429 KRTAP1-4P0C5Y4 121 aa6.16□□□□□ -1.42
CXCL12-203ENST00000374429 ASB16-AS1Q495Z4 193 aa6.16□□□□□ -1.42
CXCL12-203ENST00000374429 ROMO1P60602 79 aa6.16□□□□□ -1.42
CXCL12-203ENST00000374429 Q6ZSA8 131 aa6.14□□□□□ -1.43
CXCL12-203ENST00000374429 UQCR11O14957 56 aa6.12□□□□□ -1.43
CXCL12-203ENST00000374429 SACSQ9NZJ4 4579 aa6.12□□□□□ -1.43
CXCL12-203ENST00000374429 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
CXCL12-203ENST00000374429 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
CXCL12-203ENST00000374429 LRP1Q07954 4544 aaKnown RBP6.11□□□□□ -1.43
CXCL12-203ENST00000374429 FAT3Q8TDW7 4589 aa6.08□□□□□ -1.44
CXCL12-203ENST00000374429 FAM229AH3BQW9 127 aa6.08□□□□□ -1.44
CXCL12-203ENST00000374429 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
CXCL12-203ENST00000374429 ACYP2P14621 99 aa6.06□□□□□ -1.44
CXCL12-203ENST00000374429 PKD1P98161 4303 aa6.05□□□□□ -1.44
CXCL12-203ENST00000374429 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
CXCL12-203ENST00000374429 Q5VSD8 79 aa6.03□□□□□ -1.44
CXCL12-203ENST00000374429 APOBP04114 4563 aaKnown RBP6.03□□□□□ -1.44
CXCL12-203ENST00000374429 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
CXCL12-203ENST00000374429 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
CXCL12-203ENST00000374429 KRTAP21-3Q3LHN1 58 aa5.99□□□□□ -1.45
CXCL12-203ENST00000374429 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
CXCL12-203ENST00000374429 RYR3Q15413 4870 aa5.95□□□□□ -1.46
CXCL12-203ENST00000374429 P0C880 135 aa5.94□□□□□ -1.46
CXCL12-203ENST00000374429 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
CXCL12-203ENST00000374429 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
CXCL12-203ENST00000374429 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms