RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.55□□□□□ -0.72
LDLRAP1-201ENST00000374338 LINC00472Q9H8W2 130 aa10.55□□□□□ -0.72
LDLRAP1-201ENST00000374338 FBN3Q75N90 2809 aa10.54□□□□□ -0.72
LDLRAP1-201ENST00000374338 MMP24-AS1A0A0U1RRL7 71 aa10.53□□□□□ -0.72
LDLRAP1-201ENST00000374338 PLA2G1BP04054 148 aaKnown RBP10.53□□□□□ -0.72
LDLRAP1-201ENST00000374338 ANAPC11Q9NYG5 84 aa10.53□□□□□ -0.72
LDLRAP1-201ENST00000374338 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
LDLRAP1-201ENST00000374338 DNAH6Q9C0G6 4158 aa10.5□□□□□ -0.73
LDLRAP1-201ENST00000374338 Q6ZRN7 208 aaPredicted RBP10.47□□□□□ -0.73
LDLRAP1-201ENST00000374338 DNAH17Q9UFH2 4485 aa10.46□□□□□ -0.73
LDLRAP1-201ENST00000374338 DNAH8Q96JB1 4490 aa10.45□□□□□ -0.74
LDLRAP1-201ENST00000374338 PRR26Q8N8Z3 221 aa10.45□□□□□ -0.74
LDLRAP1-201ENST00000374338 Q6ZR54 194 aa10.44□□□□□ -0.74
LDLRAP1-201ENST00000374338 C14orf177Q52M58 125 aa10.43□□□□□ -0.74
LDLRAP1-201ENST00000374338 TP53AIP1Q9HCN2 124 aa10.43□□□□□ -0.74
LDLRAP1-201ENST00000374338 NUPR2A6NF83 97 aa10.4□□□□□ -0.74
LDLRAP1-201ENST00000374338 RTL8CO15255 209 aa10.39□□□□□ -0.75
LDLRAP1-201ENST00000374338 ASB16-AS1Q495Z4 193 aa10.39□□□□□ -0.75
LDLRAP1-201ENST00000374338 A0A087WTM6 91 aa10.38□□□□□ -0.75
LDLRAP1-201ENST00000374338 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
LDLRAP1-201ENST00000374338 LY6G6CO95867 125 aa10.34□□□□□ -0.75
LDLRAP1-201ENST00000374338 HYDINQ4G0P3 5121 aa10.34□□□□□ -0.75
LDLRAP1-201ENST00000374338 IGHV6-1A0A0B4J1U7 121 aa10.34□□□□□ -0.75
LDLRAP1-201ENST00000374338 SPACA4Q8TDM5 124 aa10.34□□□□□ -0.75
LDLRAP1-201ENST00000374338 PSORS1C2Q9UIG4 136 aa10.32□□□□□ -0.76
LDLRAP1-201ENST00000374338 A0A087X002 238 aa10.32□□□□□ -0.76
LDLRAP1-201ENST00000374338 NOTCH2NLQ7Z3S9 236 aa10.32□□□□□ -0.76
LDLRAP1-201ENST00000374338 C8orf17Q9NRJ1 99 aa10.3□□□□□ -0.76
LDLRAP1-201ENST00000374338 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
LDLRAP1-201ENST00000374338 SPRR1BP22528 89 aa10.29□□□□□ -0.76
LDLRAP1-201ENST00000374338 SPATA8Q6RVD6 105 aa10.28□□□□□ -0.76
LDLRAP1-201ENST00000374338 KRTAP13-1Q8IUC0 172 aa10.28□□□□□ -0.76
LDLRAP1-201ENST00000374338 Q96NJ1 140 aa10.28□□□□□ -0.76
LDLRAP1-201ENST00000374338 CSAG1Q6PB30 78 aa10.26□□□□□ -0.77
LDLRAP1-201ENST00000374338 IGLV5-52A0A0A0MRZ9 124 aa10.26□□□□□ -0.77
LDLRAP1-201ENST00000374338 RETNLBQ9BQ08 111 aa10.25□□□□□ -0.77
LDLRAP1-201ENST00000374338 DNAH5Q8TE73 4624 aa10.25□□□□□ -0.77
LDLRAP1-201ENST00000374338 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
LDLRAP1-201ENST00000374338 ACYP2P14621 99 aa10.21□□□□□ -0.77
LDLRAP1-201ENST00000374338 A0A1B0GU69 56 aa10.21□□□□□ -0.78
LDLRAP1-201ENST00000374338 LRP1BQ9NZR2 4599 aa10.21□□□□□ -0.78
LDLRAP1-201ENST00000374338 MRPL34Q9BQ48 92 aaKnown RBP10.2□□□□□ -0.78
LDLRAP1-201ENST00000374338 KRTAP10-2P60368 255 aa10.19□□□□□ -0.78
LDLRAP1-201ENST00000374338 C1orf134Q5TEV5 83 aa10.19□□□□□ -0.78
LDLRAP1-201ENST00000374338 MIR22HGQ0VDD5 57 aa10.18□□□□□ -0.78
LDLRAP1-201ENST00000374338 Q5W150 140 aa10.18□□□□□ -0.78
LDLRAP1-201ENST00000374338 A0A1B0GVX0 72 aa10.17□□□□□ -0.78
LDLRAP1-201ENST00000374338 WWC2-AS2Q96NR7 200 aa10.16□□□□□ -0.78
LDLRAP1-201ENST00000374338 CIRBP-AS1Q8TBR5 109 aa10.15□□□□□ -0.78
LDLRAP1-201ENST00000374338 UQCR11O14957 56 aa10.13□□□□□ -0.79
LDLRAP1-201ENST00000374338 FAT2Q9NYQ8 4349 aa10.12□□□□□ -0.79
LDLRAP1-201ENST00000374338 ZNF861PO60384 105 aa10.12□□□□□ -0.79
LDLRAP1-201ENST00000374338 CDK2AP2O75956 126 aa10.11□□□□□ -0.79
LDLRAP1-201ENST00000374338 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
LDLRAP1-201ENST00000374338 PKHD1P08F94 4074 aa10.09□□□□□ -0.79
LDLRAP1-201ENST00000374338 DMAC1Q96GE9 116 aa10.09□□□□□ -0.79
LDLRAP1-201ENST00000374338 VPS13BQ7Z7G8 4022 aa10.06□□□□□ -0.8
LDLRAP1-201ENST00000374338 PKD1P98161 4303 aa10.05□□□□□ -0.8
LDLRAP1-201ENST00000374338 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
LDLRAP1-201ENST00000374338 IGLV7-43P04211 117 aa10.04□□□□□ -0.8
LDLRAP1-201ENST00000374338 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
LDLRAP1-201ENST00000374338 KRTAP10-1P60331 282 aa10□□□□□ -0.81
LDLRAP1-201ENST00000374338 ROMO1P60602 79 aa9.91□□□□□ -0.82
LDLRAP1-201ENST00000374338 KRTAP13-2Q52LG2 175 aa9.88□□□□□ -0.83
LDLRAP1-201ENST00000374338 FAT1Q14517 4588 aa9.87□□□□□ -0.83
LDLRAP1-201ENST00000374338 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
LDLRAP1-201ENST00000374338 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
LDLRAP1-201ENST00000374338 SACSQ9NZJ4 4579 aa9.84□□□□□ -0.83
LDLRAP1-201ENST00000374338 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
LDLRAP1-201ENST00000374338 IGKV2-30P06310 120 aa9.8□□□□□ -0.84
LDLRAP1-201ENST00000374338 SPINK1P00995 79 aa9.79□□□□□ -0.84
LDLRAP1-201ENST00000374338 IGKV2D-30A0A075B6S6 120 aa9.78□□□□□ -0.84
LDLRAP1-201ENST00000374338 FAM229AH3BQW9 127 aa9.77□□□□□ -0.85
LDLRAP1-201ENST00000374338 A8MUU9 505 aa9.76□□□□□ -0.85
LDLRAP1-201ENST00000374338 DYNC1H1Q14204 4646 aaKnown RBP9.74□□□□□ -0.85
LDLRAP1-201ENST00000374338 SSBP3-AS1Q7Z2R9 100 aa9.72□□□□□ -0.85
LDLRAP1-201ENST00000374338 LINC00304Q8N9R0 145 aa9.72□□□□□ -0.85
LDLRAP1-201ENST00000374338 KRTAP1-4P0C5Y4 121 aa9.72□□□□□ -0.85
LDLRAP1-201ENST00000374338 Q6ZSA8 131 aa9.72□□□□□ -0.85
LDLRAP1-201ENST00000374338 KMT2CQ8NEZ4 4911 aaKnown RBP9.71□□□□□ -0.86
LDLRAP1-201ENST00000374338 P0C880 135 aa9.69□□□□□ -0.86
LDLRAP1-201ENST00000374338 H0YAA0 97 aa9.66□□□□□ -0.86
LDLRAP1-201ENST00000374338 TYMSOSQ8TAI1 123 aa9.65□□□□□ -0.86
LDLRAP1-201ENST00000374338 Q8N1X5 172 aa9.64□□□□□ -0.87
LDLRAP1-201ENST00000374338 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
LDLRAP1-201ENST00000374338 APOBP04114 4563 aaKnown RBP9.54□□□□□ -0.88
LDLRAP1-201ENST00000374338 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
LDLRAP1-201ENST00000374338 KRTAP16-1A8MUX0 517 aa9.54□□□□□ -0.88
LDLRAP1-201ENST00000374338 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.88
LDLRAP1-201ENST00000374338 DMBT1Q9UGM3 2413 aaPredicted RBP9.51□□□□□ -0.89
LDLRAP1-201ENST00000374338 RYR2Q92736 4967 aa9.47□□□□□ -0.89
LDLRAP1-201ENST00000374338 A0A1B0GU33 70 aa9.46□□□□□ -0.9
LDLRAP1-201ENST00000374338 MYCBP2O75592 4640 aa9.44□□□□□ -0.9
LDLRAP1-201ENST00000374338 H1FX-AS1Q4G0G2 97 aa9.39□□□□□ -0.91
LDLRAP1-201ENST00000374338 PKHD1L1Q86WI1 4243 aa9.39□□□□□ -0.91
LDLRAP1-201ENST00000374338 RYR3Q15413 4870 aa9.35□□□□□ -0.91
LDLRAP1-201ENST00000374338 SPINT4Q6UDR6 99 aa9.32□□□□□ -0.92
LDLRAP1-201ENST00000374338 K7ERS5 55 aa9.32□□□□□ -0.92
LDLRAP1-201ENST00000374338 A0A1B0GVY2 172 aa9.31□□□□□ -0.92
LDLRAP1-201ENST00000374338 NDUFAF8A1L188 74 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms