RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 PKHD1P08F94 4074 aa8.87□□□□□ -0.99
A1CF-202ENST00000373993 KRTAP7-1Q8IUC3 87 aa8.86□□□□□ -0.99
A1CF-202ENST00000373993 PLA2G1BP04054 148 aaKnown RBP8.86□□□□□ -0.99
A1CF-202ENST00000373993 RPL37AP61513 92 aaKnown RBP8.84□□□□□ -0.99
A1CF-202ENST00000373993 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
A1CF-202ENST00000373993 C1orf134Q5TEV5 83 aa8.82□□□□□ -1
A1CF-202ENST00000373993 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
A1CF-202ENST00000373993 FAM168BA1KXE4 195 aa8.82□□□□□ -1
A1CF-202ENST00000373993 A0A1B0GVY2 172 aa8.81□□□□□ -1
A1CF-202ENST00000373993 PKD1P98161 4303 aa8.81□□□□□ -1
A1CF-202ENST00000373993 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
A1CF-202ENST00000373993 KIAA1109Q2LD37 5005 aa8.8□□□□□ -1
A1CF-202ENST00000373993 SPINK7P58062 85 aa8.8□□□□□ -1
A1CF-202ENST00000373993 HRES1P13985 223 aa8.79□□□□□ -1
A1CF-202ENST00000373993 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
A1CF-202ENST00000373993 HERC2O95714 4834 aa8.77□□□□□ -1.01
A1CF-202ENST00000373993 LINC00313P59037 77 aa8.76□□□□□ -1.01
A1CF-202ENST00000373993 KRTAP1-5Q9BYS1 174 aa8.75□□□□□ -1.01
A1CF-202ENST00000373993 LINC01554Q52M75 96 aa8.74□□□□□ -1.01
A1CF-202ENST00000373993 DNAH11Q96DT5 4516 aa8.73□□□□□ -1.01
A1CF-202ENST00000373993 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
A1CF-202ENST00000373993 DYNC1H1Q14204 4646 aaKnown RBP8.72□□□□□ -1.01
A1CF-202ENST00000373993 C8orf17Q9NRJ1 99 aa8.72□□□□□ -1.01
A1CF-202ENST00000373993 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
A1CF-202ENST00000373993 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
A1CF-202ENST00000373993 ACYP2P14621 99 aa8.7□□□□□ -1.02
A1CF-202ENST00000373993 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
A1CF-202ENST00000373993 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
A1CF-202ENST00000373993 PRLHP81277 87 aa8.67□□□□□ -1.02
A1CF-202ENST00000373993 Q96NJ1 140 aa8.66□□□□□ -1.02
A1CF-202ENST00000373993 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
A1CF-202ENST00000373993 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
A1CF-202ENST00000373993 A0A1B0GVX0 72 aa8.65□□□□□ -1.02
A1CF-202ENST00000373993 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
A1CF-202ENST00000373993 KRTAP10-2P60368 255 aa8.63□□□□□ -1.03
A1CF-202ENST00000373993 RYR1P21817 5038 aa8.63□□□□□ -1.03
A1CF-202ENST00000373993 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
A1CF-202ENST00000373993 HSPG2P98160 4391 aa8.61□□□□□ -1.03
A1CF-202ENST00000373993 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
A1CF-202ENST00000373993 RETNLBQ9BQ08 111 aa8.59□□□□□ -1.03
A1CF-202ENST00000373993 CDK2AP2O75956 126 aa8.59□□□□□ -1.03
A1CF-202ENST00000373993 A0A096LNI7 61 aa8.58□□□□□ -1.04
A1CF-202ENST00000373993 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
A1CF-202ENST00000373993 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
A1CF-202ENST00000373993 C14orf177Q52M58 125 aa8.57□□□□□ -1.04
A1CF-202ENST00000373993 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
A1CF-202ENST00000373993 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
A1CF-202ENST00000373993 ABCA13Q86UQ4 5058 aa8.56□□□□□ -1.04
A1CF-202ENST00000373993 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
A1CF-202ENST00000373993 A0A1B0GU69 56 aa8.55□□□□□ -1.04
A1CF-202ENST00000373993 UQCR11O14957 56 aa8.55□□□□□ -1.04
A1CF-202ENST00000373993 KRTAP13-1Q8IUC0 172 aa8.55□□□□□ -1.04
A1CF-202ENST00000373993 PRAC1Q96KF2 57 aa8.55□□□□□ -1.04
A1CF-202ENST00000373993 A0A087WTM6 91 aa8.54□□□□□ -1.04
A1CF-202ENST00000373993 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
A1CF-202ENST00000373993 H3BS24 57 aa8.52□□□□□ -1.05
A1CF-202ENST00000373993 IGHV6-1A0A0B4J1U7 121 aa8.52□□□□□ -1.05
A1CF-202ENST00000373993 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
A1CF-202ENST00000373993 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
A1CF-202ENST00000373993 KRTAP10-1P60331 282 aa8.47□□□□□ -1.05
A1CF-202ENST00000373993 Q8N1X5 172 aa8.46□□□□□ -1.05
A1CF-202ENST00000373993 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.06
A1CF-202ENST00000373993 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
A1CF-202ENST00000373993 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
A1CF-202ENST00000373993 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
A1CF-202ENST00000373993 CHTF8P0CG12 524 aa8.41□□□□□ -1.06
A1CF-202ENST00000373993 FAT1Q14517 4588 aa8.4□□□□□ -1.06
A1CF-202ENST00000373993 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
A1CF-202ENST00000373993 Q5W150 140 aa8.39□□□□□ -1.07
A1CF-202ENST00000373993 Q5VSD8 79 aa8.38□□□□□ -1.07
A1CF-202ENST00000373993 IGLV9-49A0A0B4J1Y8 123 aa8.35□□□□□ -1.07
A1CF-202ENST00000373993 CSAG1Q6PB30 78 aa8.35□□□□□ -1.07
A1CF-202ENST00000373993 ZNF861PO60384 105 aa8.33□□□□□ -1.08
A1CF-202ENST00000373993 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
A1CF-202ENST00000373993 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
A1CF-202ENST00000373993 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
A1CF-202ENST00000373993 IGLV7-43P04211 117 aa8.31□□□□□ -1.08
A1CF-202ENST00000373993 SRRM2Q9UQ35 2752 aaKnown RBP8.3□□□□□ -1.08
A1CF-202ENST00000373993 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
A1CF-202ENST00000373993 VPS13BQ7Z7G8 4022 aa8.28□□□□□ -1.08
A1CF-202ENST00000373993 MYCBP2O75592 4640 aa8.27□□□□□ -1.08
A1CF-202ENST00000373993 Q6ZSA8 131 aa8.26□□□□□ -1.09
A1CF-202ENST00000373993 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
A1CF-202ENST00000373993 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
A1CF-202ENST00000373993 HERC1Q15751 4861 aa8.23□□□□□ -1.09
A1CF-202ENST00000373993 SPACA4Q8TDM5 124 aa8.22□□□□□ -1.09
A1CF-202ENST00000373993 CIRBP-AS1Q8TBR5 109 aa8.22□□□□□ -1.09
A1CF-202ENST00000373993 KRTAP25-1Q3LHN0 102 aa8.2□□□□□ -1.1
A1CF-202ENST00000373993 IGKV2D-30A0A075B6S6 120 aa8.19□□□□□ -1.1
A1CF-202ENST00000373993 ROMO1P60602 79 aa8.17□□□□□ -1.1
A1CF-202ENST00000373993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
A1CF-202ENST00000373993 A8MUU9 505 aa8.16□□□□□ -1.1
A1CF-202ENST00000373993 PANO1I0J062 215 aa8.15□□□□□ -1.1
A1CF-202ENST00000373993 J3QL48 77 aa8.15□□□□□ -1.11
A1CF-202ENST00000373993 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.11
A1CF-202ENST00000373993 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
A1CF-202ENST00000373993 PSORS1C2Q9UIG4 136 aa8.11□□□□□ -1.11
A1CF-202ENST00000373993 LRP1Q07954 4544 aaKnown RBP8.1□□□□□ -1.11
A1CF-202ENST00000373993 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
A1CF-202ENST00000373993 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms