RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 A0A087X002 238 aa3.93□□□□□ -1.78
CHD6-202ENST00000373222 DNAH11Q96DT5 4516 aa3.92□□□□□ -1.78
CHD6-202ENST00000373222 BCE1O60756 84 aa3.92□□□□□ -1.78
CHD6-202ENST00000373222 FAM229BQ4G0N7 80 aa3.92□□□□□ -1.78
CHD6-202ENST00000373222 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
CHD6-202ENST00000373222 Q6ZRN7 208 aaPredicted RBP3.92□□□□□ -1.78
CHD6-202ENST00000373222 WFDC13Q8IUB5 93 aa3.92□□□□□ -1.78
CHD6-202ENST00000373222 LINC00474Q9P2X8 69 aa3.92□□□□□ -1.78
CHD6-202ENST00000373222 NBDYA0A0U1RRE5 68 aa3.91□□□□□ -1.78
CHD6-202ENST00000373222 UBE2AP49459 152 aa3.91□□□□□ -1.78
CHD6-202ENST00000373222 HYDINQ4G0P3 5121 aa3.91□□□□□ -1.78
CHD6-202ENST00000373222 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
CHD6-202ENST00000373222 KRTAP16-1A8MUX0 517 aa3.9□□□□□ -1.78
CHD6-202ENST00000373222 C9orf163Q8N9P6 203 aa3.9□□□□□ -1.78
CHD6-202ENST00000373222 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
CHD6-202ENST00000373222 B9D2Q9BPU9 175 aa3.89□□□□□ -1.79
CHD6-202ENST00000373222 ANAPC11Q9NYG5 84 aa3.89□□□□□ -1.79
CHD6-202ENST00000373222 DNAH5Q8TE73 4624 aa3.89□□□□□ -1.79
CHD6-202ENST00000373222 LCA10Q71F78 164 aa3.88□□□□□ -1.79
CHD6-202ENST00000373222 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
CHD6-202ENST00000373222 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
CHD6-202ENST00000373222 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
CHD6-202ENST00000373222 FAT2Q9NYQ8 4349 aa3.87□□□□□ -1.79
CHD6-202ENST00000373222 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
CHD6-202ENST00000373222 C14orf177Q52M58 125 aa3.85□□□□□ -1.79
CHD6-202ENST00000373222 C8orf17Q9NRJ1 99 aa3.85□□□□□ -1.79
CHD6-202ENST00000373222 PKD1P98161 4303 aa3.85□□□□□ -1.79
CHD6-202ENST00000373222 A0A1B0GW54 56 aa3.85□□□□□ -1.79
CHD6-202ENST00000373222 Q8N1X5 172 aa3.85□□□□□ -1.79
CHD6-202ENST00000373222 SPACA4Q8TDM5 124 aa3.85□□□□□ -1.79
CHD6-202ENST00000373222 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
CHD6-202ENST00000373222 A0A087WTM6 91 aa3.84□□□□□ -1.79
CHD6-202ENST00000373222 LCE6AA0A183 80 aa3.84□□□□□ -1.79
CHD6-202ENST00000373222 NDUFC1O43677 76 aa3.84□□□□□ -1.79
CHD6-202ENST00000373222 PKHD1P08F94 4074 aa3.84□□□□□ -1.79
CHD6-202ENST00000373222 NUPR2A6NF83 97 aa3.84□□□□□ -1.8
CHD6-202ENST00000373222 ZCCHC13Q8WW36 166 aaKnown RBP3.84□□□□□ -1.8
CHD6-202ENST00000373222 LINC00472Q9H8W2 130 aa3.84□□□□□ -1.8
CHD6-202ENST00000373222 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
CHD6-202ENST00000373222 SPRR1BP22528 89 aa3.83□□□□□ -1.8
CHD6-202ENST00000373222 PSORS1C2Q9UIG4 136 aa3.83□□□□□ -1.8
CHD6-202ENST00000373222 RTL8CO15255 209 aa3.83□□□□□ -1.8
CHD6-202ENST00000373222 MOBPQ13875 183 aa3.83□□□□□ -1.8
CHD6-202ENST00000373222 VPS13BQ7Z7G8 4022 aa3.82□□□□□ -1.8
CHD6-202ENST00000373222 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
CHD6-202ENST00000373222 LINC00208Q96KT6 92 aa3.82□□□□□ -1.8
CHD6-202ENST00000373222 Q96NJ1 140 aa3.82□□□□□ -1.8
CHD6-202ENST00000373222 C1orf64Q8NEQ6 169 aa3.81□□□□□ -1.8
CHD6-202ENST00000373222 A8MWP4 228 aa3.8□□□□□ -1.8
CHD6-202ENST00000373222 LINC01554Q52M75 96 aa3.8□□□□□ -1.8
CHD6-202ENST00000373222 ADM2Q7Z4H4 148 aa3.8□□□□□ -1.8
CHD6-202ENST00000373222 MMP24-AS1A0A0U1RRL7 71 aa3.8□□□□□ -1.8
CHD6-202ENST00000373222 Q6ZR54 194 aa3.8□□□□□ -1.8
CHD6-202ENST00000373222 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CHD6-202ENST00000373222 hDV103S1A0JD37 113 aa3.79□□□□□ -1.8
CHD6-202ENST00000373222 H0Y9P7 68 aa3.79□□□□□ -1.8
CHD6-202ENST00000373222 LY6G6CO95867 125 aa3.78□□□□□ -1.8
CHD6-202ENST00000373222 ATP5EP56381 51 aaPredicted RBP3.78□□□□□ -1.8
CHD6-202ENST00000373222 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
CHD6-202ENST00000373222 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.8
CHD6-202ENST00000373222 SPINK6Q6UWN8 80 aa3.77□□□□□ -1.81
CHD6-202ENST00000373222 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
CHD6-202ENST00000373222 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
CHD6-202ENST00000373222 A0A1B0GVX0 72 aa3.76□□□□□ -1.81
CHD6-202ENST00000373222 ZNF861PO60384 105 aa3.76□□□□□ -1.81
CHD6-202ENST00000373222 PCOTHQ58A44 107 aa3.76□□□□□ -1.81
CHD6-202ENST00000373222 PLAC8Q9NZF1 115 aa3.76□□□□□ -1.81
CHD6-202ENST00000373222 C1orf134Q5TEV5 83 aa3.75□□□□□ -1.81
CHD6-202ENST00000373222 CIRBP-AS1Q8TBR5 109 aa3.74□□□□□ -1.81
CHD6-202ENST00000373222 A8MU10 97 aa3.73□□□□□ -1.81
CHD6-202ENST00000373222 NDUFB1O75438 58 aa3.72□□□□□ -1.81
CHD6-202ENST00000373222 IGLV7-43P04211 117 aa3.72□□□□□ -1.81
CHD6-202ENST00000373222 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
CHD6-202ENST00000373222 ASB16-AS1Q495Z4 193 aa3.71□□□□□ -1.81
CHD6-202ENST00000373222 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
CHD6-202ENST00000373222 Q5W150 140 aa3.71□□□□□ -1.82
CHD6-202ENST00000373222 KRTAP10-1P60331 282 aa3.7□□□□□ -1.82
CHD6-202ENST00000373222 FAT1Q14517 4588 aa3.7□□□□□ -1.82
CHD6-202ENST00000373222 C7orf65Q6ZTY9 151 aa3.69□□□□□ -1.82
CHD6-202ENST00000373222 RETNLBQ9BQ08 111 aa3.69□□□□□ -1.82
CHD6-202ENST00000373222 A6NED7 52 aa3.69□□□□□ -1.82
CHD6-202ENST00000373222 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
CHD6-202ENST00000373222 Q1T7F1 81 aa3.68□□□□□ -1.82
CHD6-202ENST00000373222 MRPL34Q9BQ48 92 aaKnown RBP3.68□□□□□ -1.82
CHD6-202ENST00000373222 K7ERS5 55 aa3.67□□□□□ -1.82
CHD6-202ENST00000373222 COA5Q86WW8 74 aa3.67□□□□□ -1.82
CHD6-202ENST00000373222 Q8N9P0 234 aaPredicted RBP3.67□□□□□ -1.82
CHD6-202ENST00000373222 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
CHD6-202ENST00000373222 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
CHD6-202ENST00000373222 H3BPC8 53 aa3.66□□□□□ -1.82
CHD6-202ENST00000373222 KMT2CQ8NEZ4 4911 aaKnown RBP3.66□□□□□ -1.82
CHD6-202ENST00000373222 Q5VV11 94 aa3.65□□□□□ -1.82
CHD6-202ENST00000373222 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
CHD6-202ENST00000373222 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
CHD6-202ENST00000373222 KRTAP1-4P0C5Y4 121 aa3.64□□□□□ -1.83
CHD6-202ENST00000373222 PRR15LQ9BU68 103 aa3.64□□□□□ -1.83
CHD6-202ENST00000373222 HRES1P13985 223 aa3.63□□□□□ -1.83
CHD6-202ENST00000373222 SPAG11AQ6PDA7 123 aa3.63□□□□□ -1.83
CHD6-202ENST00000373222 Q6ZSA8 131 aa3.63□□□□□ -1.83
CHD6-202ENST00000373222 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms