RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
VAMP1-201ENST00000361716 HUWE1Q7Z6Z7 4374 aaKnown RBP7.69□□□□□ -1.18
VAMP1-201ENST00000361716 C14orf177Q52M58 125 aa7.68□□□□□ -1.18
VAMP1-201ENST00000361716 A0A1B0GVX0 72 aa7.67□□□□□ -1.18
VAMP1-201ENST00000361716 ACYP2P14621 99 aa7.67□□□□□ -1.18
VAMP1-201ENST00000361716 CSAG1Q6PB30 78 aa7.66□□□□□ -1.18
VAMP1-201ENST00000361716 DNAH10Q8IVF4 4471 aa7.66□□□□□ -1.18
VAMP1-201ENST00000361716 SPINK1P00995 79 aa7.65□□□□□ -1.18
VAMP1-201ENST00000361716 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.64□□□□□ -1.19
VAMP1-201ENST00000361716 Q5W150 140 aa7.64□□□□□ -1.19
VAMP1-201ENST00000361716 PLAC8Q9NZF1 115 aa7.64□□□□□ -1.19
VAMP1-201ENST00000361716 FLG2Q5D862 2391 aaPredicted RBP7.64□□□□□ -1.19
VAMP1-201ENST00000361716 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
VAMP1-201ENST00000361716 DNAH1Q9P2D7 4330 aa7.62□□□□□ -1.19
VAMP1-201ENST00000361716 DNAH7Q8WXX0 4024 aa7.61□□□□□ -1.19
VAMP1-201ENST00000361716 Q6ZR54 194 aa7.61□□□□□ -1.19
VAMP1-201ENST00000361716 Q96NJ1 140 aa7.59□□□□□ -1.19
VAMP1-201ENST00000361716 DNAH9Q9NYC9 4486 aa7.58□□□□□ -1.2
VAMP1-201ENST00000361716 NBDYA0A0U1RRE5 68 aa7.58□□□□□ -1.2
VAMP1-201ENST00000361716 UQCR11O14957 56 aa7.58□□□□□ -1.2
VAMP1-201ENST00000361716 RTL8CO15255 209 aa7.57□□□□□ -1.2
VAMP1-201ENST00000361716 PLA2G1BP04054 148 aaKnown RBP7.56□□□□□ -1.2
VAMP1-201ENST00000361716 PSORS1C2Q9UIG4 136 aa7.56□□□□□ -1.2
VAMP1-201ENST00000361716 IGKV2D-30A0A075B6S6 120 aa7.56□□□□□ -1.2
VAMP1-201ENST00000361716 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
VAMP1-201ENST00000361716 SPRR1BP22528 89 aa7.56□□□□□ -1.2
VAMP1-201ENST00000361716 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
VAMP1-201ENST00000361716 DYNC2H1Q8NCM8 4307 aaKnown RBP7.52□□□□□ -1.21
VAMP1-201ENST00000361716 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
VAMP1-201ENST00000361716 STARD9Q9P2P6 4700 aa7.5□□□□□ -1.21
VAMP1-201ENST00000361716 ZNF706Q9Y5V0 76 aaPredicted RBP7.5□□□□□ -1.21
VAMP1-201ENST00000361716 IGLV5-52A0A0A0MRZ9 124 aa7.49□□□□□ -1.21
VAMP1-201ENST00000361716 DMBT1Q9UGM3 2413 aaPredicted RBP7.48□□□□□ -1.21
VAMP1-201ENST00000361716 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
VAMP1-201ENST00000361716 LY6G6CO95867 125 aa7.48□□□□□ -1.21
VAMP1-201ENST00000361716 C1orf134Q5TEV5 83 aa7.48□□□□□ -1.21
VAMP1-201ENST00000361716 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
VAMP1-201ENST00000361716 ASB16-AS1Q495Z4 193 aa7.46□□□□□ -1.22
VAMP1-201ENST00000361716 KMT2AQ03164 3969 aa7.45□□□□□ -1.22
VAMP1-201ENST00000361716 A0A087WTM6 91 aa7.45□□□□□ -1.22
VAMP1-201ENST00000361716 SPACA4Q8TDM5 124 aa7.45□□□□□ -1.22
VAMP1-201ENST00000361716 ZNF861PO60384 105 aa7.44□□□□□ -1.22
VAMP1-201ENST00000361716 WWC2-AS2Q96NR7 200 aa7.44□□□□□ -1.22
VAMP1-201ENST00000361716 DMAC1Q96GE9 116 aa7.43□□□□□ -1.22
VAMP1-201ENST00000361716 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
VAMP1-201ENST00000361716 Q8N1X5 172 aa7.4□□□□□ -1.22
VAMP1-201ENST00000361716 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
VAMP1-201ENST00000361716 KRTAP13-1Q8IUC0 172 aa7.37□□□□□ -1.23
VAMP1-201ENST00000361716 IGLV7-43P04211 117 aa7.33□□□□□ -1.24
VAMP1-201ENST00000361716 Q6ZRN7 208 aaPredicted RBP7.31□□□□□ -1.24
VAMP1-201ENST00000361716 KRTAP13-3Q3SY46 172 aa7.3□□□□□ -1.24
VAMP1-201ENST00000361716 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
VAMP1-201ENST00000361716 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
VAMP1-201ENST00000361716 HYDINQ4G0P3 5121 aa7.27□□□□□ -1.25
VAMP1-201ENST00000361716 VPS13DQ5THJ4 4388 aa7.24□□□□□ -1.25
VAMP1-201ENST00000361716 FRAS1Q86XX4 4008 aa7.24□□□□□ -1.25
VAMP1-201ENST00000361716 ROMO1P60602 79 aa7.22□□□□□ -1.25
VAMP1-201ENST00000361716 KRTAP10-2P60368 255 aa7.21□□□□□ -1.25
VAMP1-201ENST00000361716 DNAH2Q9P225 4427 aa7.21□□□□□ -1.26
VAMP1-201ENST00000361716 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.26
VAMP1-201ENST00000361716 C9orf92A6NGG3 77 aa7.2□□□□□ -1.26
VAMP1-201ENST00000361716 LINC00304Q8N9R0 145 aa7.17□□□□□ -1.26
VAMP1-201ENST00000361716 TYMSOSQ8TAI1 123 aa7.17□□□□□ -1.26
VAMP1-201ENST00000361716 DNAH6Q9C0G6 4158 aa7.17□□□□□ -1.26
VAMP1-201ENST00000361716 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
VAMP1-201ENST00000361716 SMR3BP02814 79 aaPredicted RBP7.16□□□□□ -1.26
VAMP1-201ENST00000361716 A0A1B0GU33 70 aa7.15□□□□□ -1.26
VAMP1-201ENST00000361716 K7ERS5 55 aa7.15□□□□□ -1.26
VAMP1-201ENST00000361716 H0YAA0 97 aa7.15□□□□□ -1.26
VAMP1-201ENST00000361716 Q6ZSA8 131 aa7.15□□□□□ -1.26
VAMP1-201ENST00000361716 A8MUU9 505 aa7.14□□□□□ -1.27
VAMP1-201ENST00000361716 HECTD4Q9Y4D8 3996 aa7.13□□□□□ -1.27
VAMP1-201ENST00000361716 KMT2CQ8NEZ4 4911 aaKnown RBP7.13□□□□□ -1.27
VAMP1-201ENST00000361716 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
VAMP1-201ENST00000361716 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
VAMP1-201ENST00000361716 ALMS1Q8TCU4 4167 aa7.1□□□□□ -1.27
VAMP1-201ENST00000361716 DNAH11Q96DT5 4516 aa7.09□□□□□ -1.27
VAMP1-201ENST00000361716 KRTAP10-1P60331 282 aa7.09□□□□□ -1.27
VAMP1-201ENST00000361716 A0A0D9SG42 100 aa7.07□□□□□ -1.28
VAMP1-201ENST00000361716 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
VAMP1-201ENST00000361716 DNAH17Q9UFH2 4485 aa7.04□□□□□ -1.28
VAMP1-201ENST00000361716 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
VAMP1-201ENST00000361716 KRTAP16-1A8MUX0 517 aa7.02□□□□□ -1.29
VAMP1-201ENST00000361716 P0C880 135 aa7.02□□□□□ -1.29
VAMP1-201ENST00000361716 H1FX-AS1Q4G0G2 97 aa7.01□□□□□ -1.29
VAMP1-201ENST00000361716 SACSQ9NZJ4 4579 aa6.98□□□□□ -1.29
VAMP1-201ENST00000361716 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
VAMP1-201ENST00000361716 PKD1P98161 4303 aa6.96□□□□□ -1.3
VAMP1-201ENST00000361716 FAT2Q9NYQ8 4349 aa6.96□□□□□ -1.3
VAMP1-201ENST00000361716 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
VAMP1-201ENST00000361716 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
VAMP1-201ENST00000361716 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
VAMP1-201ENST00000361716 LRP1BQ9NZR2 4599 aa6.93□□□□□ -1.3
VAMP1-201ENST00000361716 COX6B2Q6YFQ2 88 aa6.9□□□□□ -1.31
VAMP1-201ENST00000361716 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
VAMP1-201ENST00000361716 RYR3Q15413 4870 aa6.89□□□□□ -1.31
VAMP1-201ENST00000361716 FAT1Q14517 4588 aa6.88□□□□□ -1.31
VAMP1-201ENST00000361716 RYR2Q92736 4967 aa6.82□□□□□ -1.32
VAMP1-201ENST00000361716 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
VAMP1-201ENST00000361716 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms