RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 KRTAP1-5Q9BYS1 174 aa6.15□□□□□ -1.42
SIN3A-201ENST00000360439 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.42
SIN3A-201ENST00000360439 CELSR1Q9NYQ6 3014 aa6.14□□□□□ -1.43
SIN3A-201ENST00000360439 PSORS1C2Q9UIG4 136 aa6.12□□□□□ -1.43
SIN3A-201ENST00000360439 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
SIN3A-201ENST00000360439 ZNF861PO60384 105 aa6.11□□□□□ -1.43
SIN3A-201ENST00000360439 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
SIN3A-201ENST00000360439 TENM1Q9UKZ4 2725 aa6.1□□□□□ -1.43
SIN3A-201ENST00000360439 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
SIN3A-201ENST00000360439 KRTAP4-16G5E9R7 235 aaPredicted RBP6.09□□□□□ -1.43
SIN3A-201ENST00000360439 A8MUU9 505 aa6.08□□□□□ -1.44
SIN3A-201ENST00000360439 IGLV7-43P04211 117 aa6.08□□□□□ -1.44
SIN3A-201ENST00000360439 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
SIN3A-201ENST00000360439 FBN1P35555 2871 aaKnown RBP6.08□□□□□ -1.44
SIN3A-201ENST00000360439 SPRR1BP22528 89 aa6.08□□□□□ -1.44
SIN3A-201ENST00000360439 MRPL34Q9BQ48 92 aaKnown RBP6.08□□□□□ -1.44
SIN3A-201ENST00000360439 LINC00483Q53H64 154 aa6.07□□□□□ -1.44
SIN3A-201ENST00000360439 CSMD2Q7Z408 3487 aa6.07□□□□□ -1.44
SIN3A-201ENST00000360439 SPENQ96T58 3664 aaKnown RBP6.06□□□□□ -1.44
SIN3A-201ENST00000360439 KRTAP10-2P60368 255 aa6.06□□□□□ -1.44
SIN3A-201ENST00000360439 PKD1L1Q8TDX9 2849 aa6.05□□□□□ -1.44
SIN3A-201ENST00000360439 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
SIN3A-201ENST00000360439 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
SIN3A-201ENST00000360439 A0A0D9SG42 100 aa6.03□□□□□ -1.44
SIN3A-201ENST00000360439 KRTAP10-1P60331 282 aa6.02□□□□□ -1.45
SIN3A-201ENST00000360439 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
SIN3A-201ENST00000360439 Q5VSD8 79 aa5.99□□□□□ -1.45
SIN3A-201ENST00000360439 TENM2Q9NT68 2774 aa5.98□□□□□ -1.45
SIN3A-201ENST00000360439 TENM3Q9P273 2699 aa5.98□□□□□ -1.45
SIN3A-201ENST00000360439 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
SIN3A-201ENST00000360439 A0A1B0GU33 70 aa5.98□□□□□ -1.45
SIN3A-201ENST00000360439 BSNQ9UPA5 3926 aa5.97□□□□□ -1.45
SIN3A-201ENST00000360439 PLAC8Q9NZF1 115 aa5.97□□□□□ -1.45
SIN3A-201ENST00000360439 TGP01266 2768 aa5.96□□□□□ -1.46
SIN3A-201ENST00000360439 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
SIN3A-201ENST00000360439 VWFP04275 2813 aa5.94□□□□□ -1.46
SIN3A-201ENST00000360439 A0A087X002 238 aa5.93□□□□□ -1.46
SIN3A-201ENST00000360439 SVEP1Q4LDE5 3571 aa5.93□□□□□ -1.46
SIN3A-201ENST00000360439 Q96NJ1 140 aa5.92□□□□□ -1.46
SIN3A-201ENST00000360439 C9orf92A6NGG3 77 aa5.91□□□□□ -1.46
SIN3A-201ENST00000360439 Q8N1X5 172 aa5.91□□□□□ -1.46
SIN3A-201ENST00000360439 KRTAP7-1Q8IUC3 87 aa5.9□□□□□ -1.47
SIN3A-201ENST00000360439 PANO1I0J062 215 aa5.88□□□□□ -1.47
SIN3A-201ENST00000360439 Q6ZRN7 208 aaPredicted RBP5.88□□□□□ -1.47
SIN3A-201ENST00000360439 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
SIN3A-201ENST00000360439 P0C880 135 aa5.87□□□□□ -1.47
SIN3A-201ENST00000360439 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
SIN3A-201ENST00000360439 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
SIN3A-201ENST00000360439 KRTAP11-1Q8IUC1 163 aa5.8□□□□□ -1.48
SIN3A-201ENST00000360439 Q5W150 140 aa5.79□□□□□ -1.48
SIN3A-201ENST00000360439 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
SIN3A-201ENST00000360439 ANK3Q12955 4377 aaKnown RBP5.79□□□□□ -1.48
SIN3A-201ENST00000360439 CUBNO60494 3623 aa5.78□□□□□ -1.48
SIN3A-201ENST00000360439 TRRAPQ9Y4A5 3859 aa5.75□□□□□ -1.49
SIN3A-201ENST00000360439 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
SIN3A-201ENST00000360439 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
SIN3A-201ENST00000360439 H1FX-AS1Q4G0G2 97 aa5.7□□□□□ -1.5
SIN3A-201ENST00000360439 Q6ZSA8 131 aa5.7□□□□□ -1.5
SIN3A-201ENST00000360439 FBN3Q75N90 2809 aa5.69□□□□□ -1.5
SIN3A-201ENST00000360439 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
SIN3A-201ENST00000360439 VPS13CQ709C8 3753 aa5.61□□□□□ -1.51
SIN3A-201ENST00000360439 M0R2T5 61 aa5.61□□□□□ -1.51
SIN3A-201ENST00000360439 ZNF469Q96JG9 3925 aaPredicted RBP5.61□□□□□ -1.51
SIN3A-201ENST00000360439 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
SIN3A-201ENST00000360439 H0YAA0 97 aa5.54□□□□□ -1.52
SIN3A-201ENST00000360439 AKAP9Q99996 3911 aa5.54□□□□□ -1.52
SIN3A-201ENST00000360439 COL7A1Q02388 2944 aa5.52□□□□□ -1.53
SIN3A-201ENST00000360439 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
SIN3A-201ENST00000360439 A0A1B0GVY2 172 aa5.5□□□□□ -1.53
SIN3A-201ENST00000360439 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
SIN3A-201ENST00000360439 MEGF8Q7Z7M0 2845 aa5.47□□□□□ -1.53
SIN3A-201ENST00000360439 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
SIN3A-201ENST00000360439 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
SIN3A-201ENST00000360439 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
SIN3A-201ENST00000360439 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
SIN3A-201ENST00000360439 DNHD1Q96M86 4753 aa5.38□□□□□ -1.55
SIN3A-201ENST00000360439 R4GN34 69 aa5.38□□□□□ -1.55
SIN3A-201ENST00000360439 S4R3F8 94 aa5.31□□□□□ -1.56
SIN3A-201ENST00000360439 HUWE1Q7Z6Z7 4374 aaKnown RBP5.27□□□□□ -1.57
SIN3A-201ENST00000360439 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
SIN3A-201ENST00000360439 XP32Q5T750 250 aa5.2□□□□□ -1.58
SIN3A-201ENST00000360439 DNAH9Q9NYC9 4486 aa5.18□□□□□ -1.58
SIN3A-201ENST00000360439 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
SIN3A-201ENST00000360439 M0QZ58 72 aa5.13□□□□□ -1.59
SIN3A-201ENST00000360439 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
SIN3A-201ENST00000360439 DNAH1Q9P2D7 4330 aa5.09□□□□□ -1.6
SIN3A-201ENST00000360439 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
SIN3A-201ENST00000360439 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
SIN3A-201ENST00000360439 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
SIN3A-201ENST00000360439 DNAH3Q8TD57 4116 aa5.05□□□□□ -1.6
SIN3A-201ENST00000360439 ANK2Q01484 3957 aa5.04□□□□□ -1.6
SIN3A-201ENST00000360439 PLECQ15149 4684 aaKnown RBP5.01□□□□□ -1.61
SIN3A-201ENST00000360439 MT1HL1P0DM35 61 aa5□□□□□ -1.61
SIN3A-201ENST00000360439 ALMS1Q8TCU4 4167 aa4.99□□□□□ -1.61
SIN3A-201ENST00000360439 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
SIN3A-201ENST00000360439 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
SIN3A-201ENST00000360439 DYNC2H1Q8NCM8 4307 aaKnown RBP4.96□□□□□ -1.61
SIN3A-201ENST00000360439 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
SIN3A-201ENST00000360439 KRTAP10-4P60372 401 aaPredicted RBP4.95□□□□□ -1.62
SIN3A-201ENST00000360439 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms