RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
CSNK1E-201ENST00000359867 SRRM2Q9UQ35 2752 aaKnown RBP8.45□□□□□ -1.06
CSNK1E-201ENST00000359867 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
CSNK1E-201ENST00000359867 IGFL1Q6UW32 110 aa8.43□□□□□ -1.06
CSNK1E-201ENST00000359867 WFDC13Q8IUB5 93 aa8.43□□□□□ -1.06
CSNK1E-201ENST00000359867 C8orf87E5RJ46 101 aa8.43□□□□□ -1.06
CSNK1E-201ENST00000359867 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
CSNK1E-201ENST00000359867 Q8N9P0 234 aaPredicted RBP8.42□□□□□ -1.06
CSNK1E-201ENST00000359867 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
CSNK1E-201ENST00000359867 NDUFS5O43920 106 aa8.42□□□□□ -1.06
CSNK1E-201ENST00000359867 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
CSNK1E-201ENST00000359867 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
CSNK1E-201ENST00000359867 A0A087WSZ3 146 aa8.4□□□□□ -1.07
CSNK1E-201ENST00000359867 H3BS24 57 aa8.39□□□□□ -1.07
CSNK1E-201ENST00000359867 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
CSNK1E-201ENST00000359867 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
CSNK1E-201ENST00000359867 ZNF861PO60384 105 aa8.37□□□□□ -1.07
CSNK1E-201ENST00000359867 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
CSNK1E-201ENST00000359867 A6NED7 52 aa8.36□□□□□ -1.07
CSNK1E-201ENST00000359867 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
CSNK1E-201ENST00000359867 FAT1Q14517 4588 aa8.34□□□□□ -1.07
CSNK1E-201ENST00000359867 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
CSNK1E-201ENST00000359867 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
CSNK1E-201ENST00000359867 KIAA1109Q2LD37 5005 aa8.33□□□□□ -1.08
CSNK1E-201ENST00000359867 HSPG2P98160 4391 aa8.33□□□□□ -1.08
CSNK1E-201ENST00000359867 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
CSNK1E-201ENST00000359867 MOBPQ13875 183 aa8.31□□□□□ -1.08
CSNK1E-201ENST00000359867 Q75L30 129 aa8.31□□□□□ -1.08
CSNK1E-201ENST00000359867 LINC00208Q96KT6 92 aa8.31□□□□□ -1.08
CSNK1E-201ENST00000359867 CDK2AP2O75956 126 aa8.29□□□□□ -1.08
CSNK1E-201ENST00000359867 RYR1P21817 5038 aa8.28□□□□□ -1.08
CSNK1E-201ENST00000359867 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
CSNK1E-201ENST00000359867 IGLV9-49A0A0B4J1Y8 123 aa8.27□□□□□ -1.09
CSNK1E-201ENST00000359867 NDUFB1O75438 58 aa8.27□□□□□ -1.09
CSNK1E-201ENST00000359867 MP68P56378 58 aa8.27□□□□□ -1.09
CSNK1E-201ENST00000359867 CASC2Q6XLA1 102 aa8.26□□□□□ -1.09
CSNK1E-201ENST00000359867 PRAC1Q96KF2 57 aa8.25□□□□□ -1.09
CSNK1E-201ENST00000359867 KRTAP17-1Q9BYP8 105 aa8.25□□□□□ -1.09
CSNK1E-201ENST00000359867 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
CSNK1E-201ENST00000359867 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
CSNK1E-201ENST00000359867 H0Y9P7 68 aa8.24□□□□□ -1.09
CSNK1E-201ENST00000359867 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
CSNK1E-201ENST00000359867 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.09
CSNK1E-201ENST00000359867 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
CSNK1E-201ENST00000359867 LINC00313P59037 77 aa8.2□□□□□ -1.1
CSNK1E-201ENST00000359867 Q5VSD8 79 aa8.2□□□□□ -1.1
CSNK1E-201ENST00000359867 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
CSNK1E-201ENST00000359867 SPINK7P58062 85 aa8.19□□□□□ -1.1
CSNK1E-201ENST00000359867 A8MWP4 228 aa8.18□□□□□ -1.1
CSNK1E-201ENST00000359867 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
CSNK1E-201ENST00000359867 COA5Q86WW8 74 aa8.18□□□□□ -1.1
CSNK1E-201ENST00000359867 SPANXA2-OT1Q8N9U9 137 aa8.17□□□□□ -1.1
CSNK1E-201ENST00000359867 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
CSNK1E-201ENST00000359867 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
CSNK1E-201ENST00000359867 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
CSNK1E-201ENST00000359867 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
CSNK1E-201ENST00000359867 Q8N1X5 172 aa8.14□□□□□ -1.11
CSNK1E-201ENST00000359867 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
CSNK1E-201ENST00000359867 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
CSNK1E-201ENST00000359867 Q96NJ1 140 aa8.13□□□□□ -1.11
CSNK1E-201ENST00000359867 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
CSNK1E-201ENST00000359867 LINC01554Q52M75 96 aa8.11□□□□□ -1.11
CSNK1E-201ENST00000359867 SPINK6Q6UWN8 80 aa8.11□□□□□ -1.11
CSNK1E-201ENST00000359867 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
CSNK1E-201ENST00000359867 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
CSNK1E-201ENST00000359867 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
CSNK1E-201ENST00000359867 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
CSNK1E-201ENST00000359867 H3BPC8 53 aa8.07□□□□□ -1.12
CSNK1E-201ENST00000359867 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
CSNK1E-201ENST00000359867 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
CSNK1E-201ENST00000359867 A0A087X002 238 aa8.05□□□□□ -1.12
CSNK1E-201ENST00000359867 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
CSNK1E-201ENST00000359867 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
CSNK1E-201ENST00000359867 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
CSNK1E-201ENST00000359867 ASB16-AS1Q495Z4 193 aa8.05□□□□□ -1.12
CSNK1E-201ENST00000359867 IGLV7-46A0A075B6I9 117 aa8.03□□□□□ -1.12
CSNK1E-201ENST00000359867 HERC2O95714 4834 aa8.03□□□□□ -1.12
CSNK1E-201ENST00000359867 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
CSNK1E-201ENST00000359867 C8orf17Q9NRJ1 99 aa8.02□□□□□ -1.13
CSNK1E-201ENST00000359867 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
CSNK1E-201ENST00000359867 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
CSNK1E-201ENST00000359867 NOTCH2NLQ7Z3S9 236 aa8□□□□□ -1.13
CSNK1E-201ENST00000359867 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
CSNK1E-201ENST00000359867 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
CSNK1E-201ENST00000359867 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
CSNK1E-201ENST00000359867 HRES1P13985 223 aa7.94□□□□□ -1.14
CSNK1E-201ENST00000359867 FAT3Q8TDW7 4589 aa7.94□□□□□ -1.14
CSNK1E-201ENST00000359867 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
CSNK1E-201ENST00000359867 SPINK1P00995 79 aa7.91□□□□□ -1.14
CSNK1E-201ENST00000359867 TNXBP22105 4242 aa7.89□□□□□ -1.15
CSNK1E-201ENST00000359867 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
CSNK1E-201ENST00000359867 Q5W150 140 aa7.87□□□□□ -1.15
CSNK1E-201ENST00000359867 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
CSNK1E-201ENST00000359867 RETNLBQ9BQ08 111 aa7.86□□□□□ -1.15
CSNK1E-201ENST00000359867 KRTAP10-8P60410 259 aa7.85□□□□□ -1.15
CSNK1E-201ENST00000359867 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
CSNK1E-201ENST00000359867 MT1HL1P0DM35 61 aa7.84□□□□□ -1.15
CSNK1E-201ENST00000359867 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
CSNK1E-201ENST00000359867 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
CSNK1E-201ENST00000359867 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms