RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 SEC61GP60059 68 aa4.74□□□□□ -1.65
C11orf54-202ENST00000354421 MRPL55Q7Z7F7 128 aaKnown RBP4.74□□□□□ -1.65
C11orf54-202ENST00000354421 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
C11orf54-202ENST00000354421 FLG2Q5D862 2391 aaPredicted RBP4.73□□□□□ -1.65
C11orf54-202ENST00000354421 KRTAP10-11P60412 298 aa4.73□□□□□ -1.65
C11orf54-202ENST00000354421 UBE2BP63146 152 aa4.73□□□□□ -1.65
C11orf54-202ENST00000354421 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
C11orf54-202ENST00000354421 RETNQ9HD89 108 aa4.73□□□□□ -1.65
C11orf54-202ENST00000354421 REG3GQ6UW15 175 aa4.72□□□□□ -1.65
C11orf54-202ENST00000354421 IGFL1Q6UW32 110 aa4.72□□□□□ -1.65
C11orf54-202ENST00000354421 LIMD2Q9BT23 127 aa4.72□□□□□ -1.65
C11orf54-202ENST00000354421 LINC00588Q9Y4M8 146 aa4.72□□□□□ -1.65
C11orf54-202ENST00000354421 DEFB131BA0A096LNP1 70 aa4.71□□□□□ -1.66
C11orf54-202ENST00000354421 PSPHP1O15172 72 aa4.7□□□□□ -1.66
C11orf54-202ENST00000354421 A8MUN3 132 aa4.69□□□□□ -1.66
C11orf54-202ENST00000354421 LY6G6CO95867 125 aa4.69□□□□□ -1.66
C11orf54-202ENST00000354421 PRR4Q16378 134 aa4.69□□□□□ -1.66
C11orf54-202ENST00000354421 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
C11orf54-202ENST00000354421 Q5VV11 94 aa4.69□□□□□ -1.66
C11orf54-202ENST00000354421 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
C11orf54-202ENST00000354421 A0A087WSZ3 146 aa4.68□□□□□ -1.66
C11orf54-202ENST00000354421 H0Y9P7 68 aa4.68□□□□□ -1.66
C11orf54-202ENST00000354421 UBE2AP49459 152 aa4.68□□□□□ -1.66
C11orf54-202ENST00000354421 APOBP04114 4563 aaKnown RBP4.67□□□□□ -1.66
C11orf54-202ENST00000354421 A0A0G2JQZ4 141 aa4.67□□□□□ -1.66
C11orf54-202ENST00000354421 A0A1B0GVY2 172 aa4.67□□□□□ -1.66
C11orf54-202ENST00000354421 A0A1W2PNN7 141 aa4.67□□□□□ -1.66
C11orf54-202ENST00000354421 CNBPP62633 177 aaKnown RBP4.67□□□□□ -1.66
C11orf54-202ENST00000354421 CASC2Q6XLA1 102 aa4.67□□□□□ -1.66
C11orf54-202ENST00000354421 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
C11orf54-202ENST00000354421 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
C11orf54-202ENST00000354421 C11orf45Q8TAV5 145 aa4.67□□□□□ -1.66
C11orf54-202ENST00000354421 SPRR1BP22528 89 aa4.66□□□□□ -1.66
C11orf54-202ENST00000354421 CD164Q04900 197 aa4.66□□□□□ -1.66
C11orf54-202ENST00000354421 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
C11orf54-202ENST00000354421 A8MWP4 228 aa4.66□□□□□ -1.66
C11orf54-202ENST00000354421 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
C11orf54-202ENST00000354421 DNAH17Q9UFH2 4485 aa4.66□□□□□ -1.66
C11orf54-202ENST00000354421 LOC101927531A0A1B0GV80 90 aa4.65□□□□□ -1.67
C11orf54-202ENST00000354421 H0Y9J4 135 aa4.65□□□□□ -1.67
C11orf54-202ENST00000354421 LINC00472Q9H8W2 130 aa4.65□□□□□ -1.67
C11orf54-202ENST00000354421 DNAH2Q9P225 4427 aa4.64□□□□□ -1.67
C11orf54-202ENST00000354421 VPS13DQ5THJ4 4388 aa4.64□□□□□ -1.67
C11orf54-202ENST00000354421 CDK2AP2O75956 126 aa4.64□□□□□ -1.67
C11orf54-202ENST00000354421 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
C11orf54-202ENST00000354421 C16orf90A8MZG2 172 aa4.63□□□□□ -1.67
C11orf54-202ENST00000354421 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
C11orf54-202ENST00000354421 Q75L30 129 aa4.63□□□□□ -1.67
C11orf54-202ENST00000354421 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
C11orf54-202ENST00000354421 IGLV7-46A0A075B6I9 117 aa4.63□□□□□ -1.67
C11orf54-202ENST00000354421 NDUFS5O43920 106 aa4.63□□□□□ -1.67
C11orf54-202ENST00000354421 PRLHP81277 87 aa4.63□□□□□ -1.67
C11orf54-202ENST00000354421 CHKB-CPT1BH3BT56 60 aa4.62□□□□□ -1.67
C11orf54-202ENST00000354421 PKD1P98161 4303 aa4.62□□□□□ -1.67
C11orf54-202ENST00000354421 DNAH6Q9C0G6 4158 aa4.61□□□□□ -1.67
C11orf54-202ENST00000354421 A0A096LNI7 61 aa4.61□□□□□ -1.67
C11orf54-202ENST00000354421 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
C11orf54-202ENST00000354421 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
C11orf54-202ENST00000354421 COA5Q86WW8 74 aa4.6□□□□□ -1.67
C11orf54-202ENST00000354421 A8MU10 97 aa4.6□□□□□ -1.67
C11orf54-202ENST00000354421 ASB16-AS1Q495Z4 193 aa4.6□□□□□ -1.67
C11orf54-202ENST00000354421 KTN1-AS1Q86SY8 53 aa4.6□□□□□ -1.67
C11orf54-202ENST00000354421 PHF5AQ7RTV0 110 aaKnown RBP4.59□□□□□ -1.67
C11orf54-202ENST00000354421 PLAC8Q9NZF1 115 aa4.59□□□□□ -1.67
C11orf54-202ENST00000354421 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
C11orf54-202ENST00000354421 MOBPQ13875 183 aa4.58□□□□□ -1.68
C11orf54-202ENST00000354421 LCA10Q71F78 164 aa4.58□□□□□ -1.68
C11orf54-202ENST00000354421 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
C11orf54-202ENST00000354421 IGKV2-24A0A0C4DH68 120 aa4.57□□□□□ -1.68
C11orf54-202ENST00000354421 KRTAP5-9P26371 169 aa4.57□□□□□ -1.68
C11orf54-202ENST00000354421 C14orf177Q52M58 125 aa4.57□□□□□ -1.68
C11orf54-202ENST00000354421 KRTAP11-1Q8IUC1 163 aa4.57□□□□□ -1.68
C11orf54-202ENST00000354421 FAT1Q14517 4588 aa4.56□□□□□ -1.68
C11orf54-202ENST00000354421 Q6ZR54 194 aa4.56□□□□□ -1.68
C11orf54-202ENST00000354421 A6NN06 94 aa4.55□□□□□ -1.68
C11orf54-202ENST00000354421 Q96NJ1 140 aa4.55□□□□□ -1.68
C11orf54-202ENST00000354421 A6NED7 52 aa4.55□□□□□ -1.68
C11orf54-202ENST00000354421 C8orf17Q9NRJ1 99 aa4.55□□□□□ -1.68
C11orf54-202ENST00000354421 LRP1BQ9NZR2 4599 aa4.54□□□□□ -1.68
C11orf54-202ENST00000354421 KRTAP13-1Q8IUC0 172 aa4.54□□□□□ -1.68
C11orf54-202ENST00000354421 A0A087X002 238 aa4.52□□□□□ -1.69
C11orf54-202ENST00000354421 PCOTHQ58A44 107 aa4.52□□□□□ -1.69
C11orf54-202ENST00000354421 VPS13BQ7Z7G8 4022 aa4.52□□□□□ -1.69
C11orf54-202ENST00000354421 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
C11orf54-202ENST00000354421 LRP2P98164 4655 aa4.52□□□□□ -1.69
C11orf54-202ENST00000354421 CHTF8P0CG12 524 aa4.52□□□□□ -1.69
C11orf54-202ENST00000354421 SPTSSBQ8NFR3 76 aa4.52□□□□□ -1.69
C11orf54-202ENST00000354421 RBM12B-AS1Q9P1G2 102 aa4.51□□□□□ -1.69
C11orf54-202ENST00000354421 A0A1B0GVX0 72 aa4.5□□□□□ -1.69
C11orf54-202ENST00000354421 HRES1P13985 223 aa4.5□□□□□ -1.69
C11orf54-202ENST00000354421 LINC00483Q53H64 154 aa4.5□□□□□ -1.69
C11orf54-202ENST00000354421 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
C11orf54-202ENST00000354421 SPAG11AQ6PDA7 123 aa4.49□□□□□ -1.69
C11orf54-202ENST00000354421 C7orf65Q6ZTY9 151 aa4.49□□□□□ -1.69
C11orf54-202ENST00000354421 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
C11orf54-202ENST00000354421 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
C11orf54-202ENST00000354421 MRPL34Q9BQ48 92 aaKnown RBP4.49□□□□□ -1.69
C11orf54-202ENST00000354421 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
C11orf54-202ENST00000354421 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-202ENST00000354421 SPINK7P58062 85 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms