RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 Q8N9L7 120 aa11.24□□□□□ -0.61
SIGMAR1-202ENST00000353468 MT-ATP8P03928 68 aa11.22□□□□□ -0.61
SIGMAR1-202ENST00000353468 PRR15Q8IV56 129 aa11.22□□□□□ -0.61
SIGMAR1-202ENST00000353468 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
SIGMAR1-202ENST00000353468 IGHV6-1A0A0B4J1U7 121 aa11.2□□□□□ -0.62
SIGMAR1-202ENST00000353468 PRR4Q16378 134 aa11.2□□□□□ -0.62
SIGMAR1-202ENST00000353468 IGLV7-46A0A075B6I9 117 aa11.19□□□□□ -0.62
SIGMAR1-202ENST00000353468 HIST1H4AP62805 103 aaKnown RBP11.17□□□□□ -0.62
SIGMAR1-202ENST00000353468 NOTCH2NLQ7Z3S9 236 aa11.13□□□□□ -0.63
SIGMAR1-202ENST00000353468 IMUPQ9GZP8 106 aa11.13□□□□□ -0.63
SIGMAR1-202ENST00000353468 C8orf87E5RJ46 101 aa11.12□□□□□ -0.63
SIGMAR1-202ENST00000353468 LINC00313P59037 77 aa11.12□□□□□ -0.63
SIGMAR1-202ENST00000353468 C8orf17Q9NRJ1 99 aa11.12□□□□□ -0.63
SIGMAR1-202ENST00000353468 A0A087WVE0 104 aa11.1□□□□□ -0.63
SIGMAR1-202ENST00000353468 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
SIGMAR1-202ENST00000353468 MMP24-AS1A0A0U1RRL7 71 aa11.08□□□□□ -0.64
SIGMAR1-202ENST00000353468 HCG22E2RYF7 251 aa11.07□□□□□ -0.64
SIGMAR1-202ENST00000353468 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
SIGMAR1-202ENST00000353468 WFDC13Q8IUB5 93 aa11.05□□□□□ -0.64
SIGMAR1-202ENST00000353468 hDV103S1A0JD37 113 aa11.04□□□□□ -0.64
SIGMAR1-202ENST00000353468 HERC1Q15751 4861 aa11.04□□□□□ -0.64
SIGMAR1-202ENST00000353468 TPRXLQ17RH7 258 aa11.03□□□□□ -0.64
SIGMAR1-202ENST00000353468 CASC2Q6XLA1 102 aa11.03□□□□□ -0.64
SIGMAR1-202ENST00000353468 KRTAP16-1A8MUX0 517 aa11.01□□□□□ -0.65
SIGMAR1-202ENST00000353468 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
SIGMAR1-202ENST00000353468 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
SIGMAR1-202ENST00000353468 LPAP08519 4548 aa10.94□□□□□ -0.66
SIGMAR1-202ENST00000353468 XP32Q5T750 250 aa10.93□□□□□ -0.66
SIGMAR1-202ENST00000353468 FAM236AA0A1B0GUQ0 79 aa10.92□□□□□ -0.66
SIGMAR1-202ENST00000353468 FAM236BA0A1B0GV22 79 aa10.92□□□□□ -0.66
SIGMAR1-202ENST00000353468 Q8N9P0 234 aaPredicted RBP10.92□□□□□ -0.66
SIGMAR1-202ENST00000353468 C20orf166-AS1Q96NR2 134 aa10.9□□□□□ -0.66
SIGMAR1-202ENST00000353468 A8MUU9 505 aa10.89□□□□□ -0.67
SIGMAR1-202ENST00000353468 NDUFS5O43920 106 aa10.88□□□□□ -0.67
SIGMAR1-202ENST00000353468 SCGB1A1P11684 91 aa10.88□□□□□ -0.67
SIGMAR1-202ENST00000353468 HMCN2Q8NDA2 5059 aa10.87□□□□□ -0.67
SIGMAR1-202ENST00000353468 Q75L30 129 aa10.86□□□□□ -0.67
SIGMAR1-202ENST00000353468 RPL37P61927 97 aaKnown RBP10.82□□□□□ -0.68
SIGMAR1-202ENST00000353468 LRP2P98164 4655 aa10.8□□□□□ -0.68
SIGMAR1-202ENST00000353468 TP53AIP1Q9HCN2 124 aa10.8□□□□□ -0.68
SIGMAR1-202ENST00000353468 ATOX1O00244 68 aa10.77□□□□□ -0.68
SIGMAR1-202ENST00000353468 OCR1Q9BZK8 76 aa10.77□□□□□ -0.68
SIGMAR1-202ENST00000353468 UQCRQO14949 82 aa10.73□□□□□ -0.69
SIGMAR1-202ENST00000353468 ATP11AUNQ6ZP68 121 aa10.73□□□□□ -0.69
SIGMAR1-202ENST00000353468 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
SIGMAR1-202ENST00000353468 ZCCHC13Q8WW36 166 aaKnown RBP10.73□□□□□ -0.69
SIGMAR1-202ENST00000353468 Q5W150 140 aa10.71□□□□□ -0.69
SIGMAR1-202ENST00000353468 TRAV7A0A075B6U4 112 aa10.69□□□□□ -0.7
SIGMAR1-202ENST00000353468 SEC61BP60468 96 aaKnown RBP10.67□□□□□ -0.7
SIGMAR1-202ENST00000353468 PCOTHQ58A44 107 aa10.67□□□□□ -0.7
SIGMAR1-202ENST00000353468 TRAV22A0A0B4J277 110 aa10.65□□□□□ -0.7
SIGMAR1-202ENST00000353468 SERP2Q8N6R1 65 aa10.64□□□□□ -0.71
SIGMAR1-202ENST00000353468 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
SIGMAR1-202ENST00000353468 H0Y9P7 68 aa10.62□□□□□ -0.71
SIGMAR1-202ENST00000353468 MUC17Q685J3 4493 aa10.61□□□□□ -0.71
SIGMAR1-202ENST00000353468 ANAPC13Q9BS18 74 aa10.6□□□□□ -0.71
SIGMAR1-202ENST00000353468 MP68P56378 58 aa10.58□□□□□ -0.72
SIGMAR1-202ENST00000353468 COX7CP15954 63 aa10.54□□□□□ -0.72
SIGMAR1-202ENST00000353468 LINC00208Q96KT6 92 aa10.53□□□□□ -0.72
SIGMAR1-202ENST00000353468 H3BPC8 53 aa10.52□□□□□ -0.73
SIGMAR1-202ENST00000353468 IGKV2D-30A0A075B6S6 120 aa10.51□□□□□ -0.73
SIGMAR1-202ENST00000353468 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
SIGMAR1-202ENST00000353468 C1orf64Q8NEQ6 169 aa10.51□□□□□ -0.73
SIGMAR1-202ENST00000353468 LOC101927531A0A1B0GV80 90 aa10.5□□□□□ -0.73
SIGMAR1-202ENST00000353468 SPINK7P58062 85 aa10.5□□□□□ -0.73
SIGMAR1-202ENST00000353468 C7orf65Q6ZTY9 151 aa10.48□□□□□ -0.73
SIGMAR1-202ENST00000353468 C20orf197Q8N268 126 aa10.46□□□□□ -0.74
SIGMAR1-202ENST00000353468 CYP4F30PQ9H0H9 118 aa10.46□□□□□ -0.74
SIGMAR1-202ENST00000353468 A0A0U1RQV1 116 aa10.45□□□□□ -0.74
SIGMAR1-202ENST00000353468 KRTAP4-1Q9BYQ7 146 aa10.44□□□□□ -0.74
SIGMAR1-202ENST00000353468 SNURFQ9Y675 71 aa10.43□□□□□ -0.74
SIGMAR1-202ENST00000353468 KLKP1Q107X0 134 aa10.38□□□□□ -0.75
SIGMAR1-202ENST00000353468 CCDC179H3BU77 68 aa10.37□□□□□ -0.75
SIGMAR1-202ENST00000353468 HRES1P13985 223 aa10.33□□□□□ -0.76
SIGMAR1-202ENST00000353468 UBR4Q5T4S7 5183 aa10.33□□□□□ -0.76
SIGMAR1-202ENST00000353468 PCP4P48539 62 aa10.3□□□□□ -0.76
SIGMAR1-202ENST00000353468 CYSTM1Q9H1C7 97 aa10.27□□□□□ -0.76
SIGMAR1-202ENST00000353468 C4orf26Q17RF5 130 aa10.26□□□□□ -0.77
SIGMAR1-202ENST00000353468 MPLKIPQ8TAP9 179 aa10.25□□□□□ -0.77
SIGMAR1-202ENST00000353468 NDUFC1O43677 76 aa10.24□□□□□ -0.77
SIGMAR1-202ENST00000353468 RNF213Q63HN8 5207 aa10.23□□□□□ -0.77
SIGMAR1-202ENST00000353468 MUC2Q02817 5179 aa10.23□□□□□ -0.77
SIGMAR1-202ENST00000353468 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
SIGMAR1-202ENST00000353468 H7BZZ5 65 aa10.2□□□□□ -0.78
SIGMAR1-202ENST00000353468 COX6B2Q6YFQ2 88 aa10.18□□□□□ -0.78
SIGMAR1-202ENST00000353468 FAM236DA0A1B0GTK5 79 aa10.13□□□□□ -0.79
SIGMAR1-202ENST00000353468 FAM236CP0DP71 79 aa10.13□□□□□ -0.79
SIGMAR1-202ENST00000353468 SPANXA2-OT1Q8N9U9 137 aa10.13□□□□□ -0.79
SIGMAR1-202ENST00000353468 KRTAP3-1Q9BYR8 98 aa10.12□□□□□ -0.79
SIGMAR1-202ENST00000353468 KRTAP19-2Q3LHN2 52 aa10.1□□□□□ -0.79
SIGMAR1-202ENST00000353468 A8MUN3 132 aa10.05□□□□□ -0.8
SIGMAR1-202ENST00000353468 DMAC1Q96GE9 116 aa10.05□□□□□ -0.8
SIGMAR1-202ENST00000353468 H1FX-AS1Q4G0G2 97 aa10.03□□□□□ -0.8
SIGMAR1-202ENST00000353468 LCE2CQ5TA81 110 aa10□□□□□ -0.81
SIGMAR1-202ENST00000353468 TMEM258P61165 79 aa9.99□□□□□ -0.81
SIGMAR1-202ENST00000353468 ACYP2P14621 99 aa9.97□□□□□ -0.81
SIGMAR1-202ENST00000353468 ATP5EP56381 51 aaPredicted RBP9.94□□□□□ -0.82
SIGMAR1-202ENST00000353468 FAT4Q6V0I7 4981 aa9.94□□□□□ -0.82
SIGMAR1-202ENST00000353468 FLGP20930 4061 aaPredicted RBP9.88□□□□□ -0.83
SIGMAR1-202ENST00000353468 S4R3F8 94 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms