RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RYR3Q15413 4870 aa11.86□□□□□ -0.51
CHRNA3-202ENST00000348639 A0A1B0GVY2 172 aa11.86□□□□□ -0.51
CHRNA3-202ENST00000348639 H3BPC8 53 aa11.86□□□□□ -0.51
CHRNA3-202ENST00000348639 SPINK6Q6UWN8 80 aa11.84□□□□□ -0.51
CHRNA3-202ENST00000348639 LINC00208Q96KT6 92 aa11.84□□□□□ -0.51
CHRNA3-202ENST00000348639 TP53AIP1Q9HCN2 124 aa11.83□□□□□ -0.52
CHRNA3-202ENST00000348639 SMR3BP02814 79 aaPredicted RBP11.81□□□□□ -0.52
CHRNA3-202ENST00000348639 Q5XG85 94 aa11.81□□□□□ -0.52
CHRNA3-202ENST00000348639 TRAV22A0A0B4J277 110 aa11.81□□□□□ -0.52
CHRNA3-202ENST00000348639 NOTCH2NLQ7Z3S9 236 aa11.81□□□□□ -0.52
CHRNA3-202ENST00000348639 MRPL34Q9BQ48 92 aaKnown RBP11.8□□□□□ -0.52
CHRNA3-202ENST00000348639 PLA2G1BP04054 148 aaKnown RBP11.79□□□□□ -0.52
CHRNA3-202ENST00000348639 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
CHRNA3-202ENST00000348639 C1orf64Q8NEQ6 169 aa11.76□□□□□ -0.53
CHRNA3-202ENST00000348639 NDUFS5O43920 106 aa11.74□□□□□ -0.53
CHRNA3-202ENST00000348639 C1orf195Q5TG92 126 aa11.72□□□□□ -0.53
CHRNA3-202ENST00000348639 C8orf87E5RJ46 101 aa11.72□□□□□ -0.53
CHRNA3-202ENST00000348639 LIMD2Q9BT23 127 aa11.71□□□□□ -0.53
CHRNA3-202ENST00000348639 TYMSOSQ8TAI1 123 aa11.7□□□□□ -0.54
CHRNA3-202ENST00000348639 CYP4F30PQ9H0H9 118 aa11.68□□□□□ -0.54
CHRNA3-202ENST00000348639 SMIM26A0A096LP01 95 aa11.67□□□□□ -0.54
CHRNA3-202ENST00000348639 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
CHRNA3-202ENST00000348639 SPANXA2-OT1Q8N9U9 137 aa11.66□□□□□ -0.54
CHRNA3-202ENST00000348639 SPINK1P00995 79 aa11.64□□□□□ -0.55
CHRNA3-202ENST00000348639 LINC00313P59037 77 aa11.64□□□□□ -0.55
CHRNA3-202ENST00000348639 APOBP04114 4563 aaKnown RBP11.63□□□□□ -0.55
CHRNA3-202ENST00000348639 PRR26Q8N8Z3 221 aa11.63□□□□□ -0.55
CHRNA3-202ENST00000348639 PRR4Q16378 134 aa11.62□□□□□ -0.55
CHRNA3-202ENST00000348639 FP248Q71RG6 208 aaPredicted RBP11.6□□□□□ -0.55
CHRNA3-202ENST00000348639 KRTAP10-4P60372 401 aaPredicted RBP11.59□□□□□ -0.55
CHRNA3-202ENST00000348639 FAT1Q14517 4588 aa11.58□□□□□ -0.56
CHRNA3-202ENST00000348639 C4orf26Q17RF5 130 aa11.56□□□□□ -0.56
CHRNA3-202ENST00000348639 KRTAP13-3Q3SY46 172 aa11.55□□□□□ -0.56
CHRNA3-202ENST00000348639 LINC00304Q8N9R0 145 aa11.55□□□□□ -0.56
CHRNA3-202ENST00000348639 RPS29P62273 56 aaKnown RBP11.55□□□□□ -0.56
CHRNA3-202ENST00000348639 Q5W150 140 aa11.55□□□□□ -0.56
CHRNA3-202ENST00000348639 Q8N9P0 234 aaPredicted RBP11.55□□□□□ -0.56
CHRNA3-202ENST00000348639 SPAG11AQ6PDA7 123 aa11.53□□□□□ -0.56
CHRNA3-202ENST00000348639 IGLV7-46A0A075B6I9 117 aa11.53□□□□□ -0.56
CHRNA3-202ENST00000348639 PCOTHQ58A44 107 aa11.53□□□□□ -0.56
CHRNA3-202ENST00000348639 LOC101927531A0A1B0GV80 90 aa11.51□□□□□ -0.57
CHRNA3-202ENST00000348639 KRTAP16-1A8MUX0 517 aa11.5□□□□□ -0.57
CHRNA3-202ENST00000348639 FAM229AH3BQW9 127 aa11.46□□□□□ -0.57
CHRNA3-202ENST00000348639 EPPK1P58107 5090 aaKnown RBP11.43□□□□□ -0.58
CHRNA3-202ENST00000348639 MPLKIPQ8TAP9 179 aa11.42□□□□□ -0.58
CHRNA3-202ENST00000348639 RETNLBQ9BQ08 111 aa11.35□□□□□ -0.59
CHRNA3-202ENST00000348639 Q1T7F1 81 aa11.35□□□□□ -0.59
CHRNA3-202ENST00000348639 COA5Q86WW8 74 aa11.34□□□□□ -0.59
CHRNA3-202ENST00000348639 PKHD1L1Q86WI1 4243 aa11.34□□□□□ -0.59
CHRNA3-202ENST00000348639 Q5VSD8 79 aa11.33□□□□□ -0.6
CHRNA3-202ENST00000348639 IGKV2-30P06310 120 aa11.31□□□□□ -0.6
CHRNA3-202ENST00000348639 HSPG2P98160 4391 aa11.3□□□□□ -0.6
CHRNA3-202ENST00000348639 HRES1P13985 223 aa11.25□□□□□ -0.61
CHRNA3-202ENST00000348639 V9GYY9 64 aa11.25□□□□□ -0.61
CHRNA3-202ENST00000348639 KIAA1109Q2LD37 5005 aa11.21□□□□□ -0.61
CHRNA3-202ENST00000348639 RYR1P21817 5038 aa11.21□□□□□ -0.61
CHRNA3-202ENST00000348639 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
CHRNA3-202ENST00000348639 SVIPQ8NHG7 77 aa11.19□□□□□ -0.62
CHRNA3-202ENST00000348639 LRP1Q07954 4544 aaKnown RBP11.18□□□□□ -0.62
CHRNA3-202ENST00000348639 IGKV2D-30A0A075B6S6 120 aa11.18□□□□□ -0.62
CHRNA3-202ENST00000348639 Q8N1X5 172 aa11.18□□□□□ -0.62
CHRNA3-202ENST00000348639 DMAC1Q96GE9 116 aa11.17□□□□□ -0.62
CHRNA3-202ENST00000348639 KRTAP17-1Q9BYP8 105 aa11.17□□□□□ -0.62
CHRNA3-202ENST00000348639 ACYP2P14621 99 aa11.16□□□□□ -0.62
CHRNA3-202ENST00000348639 KRTAP10-8P60410 259 aa11.15□□□□□ -0.62
CHRNA3-202ENST00000348639 C20orf166-AS1Q96NR2 134 aa11.14□□□□□ -0.63
CHRNA3-202ENST00000348639 PSPHP1O15172 72 aa11.14□□□□□ -0.63
CHRNA3-202ENST00000348639 A8MUU9 505 aa11.13□□□□□ -0.63
CHRNA3-202ENST00000348639 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
CHRNA3-202ENST00000348639 TNXBP22105 4242 aa11.11□□□□□ -0.63
CHRNA3-202ENST00000348639 A8MUN3 132 aa11.09□□□□□ -0.63
CHRNA3-202ENST00000348639 C7orf65Q6ZTY9 151 aa11.08□□□□□ -0.64
CHRNA3-202ENST00000348639 BIRC6Q9NR09 4857 aa11.06□□□□□ -0.64
CHRNA3-202ENST00000348639 Q5VV11 94 aa11.03□□□□□ -0.64
CHRNA3-202ENST00000348639 BRK1Q8WUW1 75 aa11.02□□□□□ -0.64
CHRNA3-202ENST00000348639 PRR15LQ9BU68 103 aa11.02□□□□□ -0.65
CHRNA3-202ENST00000348639 LINC01558Q9Y6Z2 57 aa11.02□□□□□ -0.65
CHRNA3-202ENST00000348639 PRO0628Q9UI54 55 aa11.01□□□□□ -0.65
CHRNA3-202ENST00000348639 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
CHRNA3-202ENST00000348639 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
CHRNA3-202ENST00000348639 Q75L30 129 aa10.97□□□□□ -0.65
CHRNA3-202ENST00000348639 DMBT1Q9UGM3 2413 aaPredicted RBP10.97□□□□□ -0.65
CHRNA3-202ENST00000348639 MYCBP2O75592 4640 aa10.96□□□□□ -0.66
CHRNA3-202ENST00000348639 MT1HL1P0DM35 61 aa10.91□□□□□ -0.66
CHRNA3-202ENST00000348639 KRTAP4-5Q9BYR2 181 aa10.87□□□□□ -0.67
CHRNA3-202ENST00000348639 HERC2O95714 4834 aa10.86□□□□□ -0.67
CHRNA3-202ENST00000348639 SPINK7P58062 85 aa10.85□□□□□ -0.67
CHRNA3-202ENST00000348639 ATP11AUNQ6ZP68 121 aa10.78□□□□□ -0.68
CHRNA3-202ENST00000348639 A6NED7 52 aa10.77□□□□□ -0.68
CHRNA3-202ENST00000348639 RPL37P61927 97 aaKnown RBP10.76□□□□□ -0.69
CHRNA3-202ENST00000348639 ABCA13Q86UQ4 5058 aa10.75□□□□□ -0.69
CHRNA3-202ENST00000348639 XP32Q5T750 250 aa10.75□□□□□ -0.69
CHRNA3-202ENST00000348639 KRTAP3-1Q9BYR8 98 aa10.73□□□□□ -0.69
CHRNA3-202ENST00000348639 A0A1B0GU69 56 aa10.7□□□□□ -0.7
CHRNA3-202ENST00000348639 A8MU10 97 aa10.7□□□□□ -0.7
CHRNA3-202ENST00000348639 LCA10Q71F78 164 aa10.68□□□□□ -0.7
CHRNA3-202ENST00000348639 CDC42SE1Q9NRR8 79 aa10.65□□□□□ -0.7
CHRNA3-202ENST00000348639 COX6B2Q6YFQ2 88 aa10.65□□□□□ -0.71
CHRNA3-202ENST00000348639 SPTSSBQ8NFR3 76 aa10.64□□□□□ -0.71
CHRNA3-202ENST00000348639 TPRXLQ17RH7 258 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms