RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 A0A1B0GVX0 72 aa15□□□□□ -0.01
SSBP4-202ENST00000348495 K7EQZ3 153 aa15□□□□□ -0.01
SSBP4-202ENST00000348495 NDUFB1O75438 58 aa15□□□□□ -0.01
SSBP4-202ENST00000348495 PRR15Q8IV56 129 aa15□□□□□ -0.01
SSBP4-202ENST00000348495 Q8N9L7 120 aa14.99□□□□□ -0.01
SSBP4-202ENST00000348495 IGHV6-1A0A0B4J1U7 121 aa14.95□□□□□ -0.02
SSBP4-202ENST00000348495 KRTAP13-3Q3SY46 172 aa14.92□□□□□ -0.02
SSBP4-202ENST00000348495 NOTCH2NLQ7Z3S9 236 aa14.92□□□□□ -0.02
SSBP4-202ENST00000348495 TPRXLQ17RH7 258 aa14.89□□□□□ -0.03
SSBP4-202ENST00000348495 C8orf87E5RJ46 101 aa14.88□□□□□ -0.03
SSBP4-202ENST00000348495 MT-ATP8P03928 68 aa14.88□□□□□ -0.03
SSBP4-202ENST00000348495 LINC00313P59037 77 aa14.87□□□□□ -0.03
SSBP4-202ENST00000348495 C9orf92A6NGG3 77 aa14.86□□□□□ -0.03
SSBP4-202ENST00000348495 C8orf17Q9NRJ1 99 aa14.86□□□□□ -0.03
SSBP4-202ENST00000348495 MMP24-AS1A0A0U1RRL7 71 aa14.83□□□□□ -0.03
SSBP4-202ENST00000348495 HIST1H4AP62805 103 aaKnown RBP14.82□□□□□ -0.04
SSBP4-202ENST00000348495 KRTAP16-1A8MUX0 517 aa14.79□□□□□ -0.04
SSBP4-202ENST00000348495 PCP4P48539 62 aa14.78□□□□□ -0.04
SSBP4-202ENST00000348495 IMUPQ9GZP8 106 aa14.77□□□□□ -0.05
SSBP4-202ENST00000348495 A0A087WVE0 104 aa14.75□□□□□ -0.05
SSBP4-202ENST00000348495 HCG22E2RYF7 251 aa14.75□□□□□ -0.05
SSBP4-202ENST00000348495 HMCN2Q8NDA2 5059 aa14.75□□□□□ -0.05
SSBP4-202ENST00000348495 LPAP08519 4548 aa14.72□□□□□ -0.05
SSBP4-202ENST00000348495 hDV103S1A0JD37 113 aa14.72□□□□□ -0.05
SSBP4-202ENST00000348495 XP32Q5T750 250 aa14.72□□□□□ -0.05
SSBP4-202ENST00000348495 WFDC13Q8IUB5 93 aa14.72□□□□□ -0.05
SSBP4-202ENST00000348495 CASC2Q6XLA1 102 aa14.71□□□□□ -0.05
SSBP4-202ENST00000348495 TMEM254Q8TBM7 123 aa14.7□□□□□ -0.06
SSBP4-202ENST00000348495 MRPL34Q9BQ48 92 aaKnown RBP14.66□□□□□ -0.06
SSBP4-202ENST00000348495 C20orf166-AS1Q96NR2 134 aa14.65□□□□□ -0.06
SSBP4-202ENST00000348495 A8MUU9 505 aa14.63□□□□□ -0.07
SSBP4-202ENST00000348495 Q8N9P0 234 aaPredicted RBP14.63□□□□□ -0.07
SSBP4-202ENST00000348495 Q75L30 129 aa14.59□□□□□ -0.07
SSBP4-202ENST00000348495 LRP2P98164 4655 aa14.57□□□□□ -0.08
SSBP4-202ENST00000348495 RPL37P61927 97 aaKnown RBP14.55□□□□□ -0.08
SSBP4-202ENST00000348495 FAM236AA0A1B0GUQ0 79 aa14.48□□□□□ -0.09
SSBP4-202ENST00000348495 FAM236BA0A1B0GV22 79 aa14.48□□□□□ -0.09
SSBP4-202ENST00000348495 NDUFS5O43920 106 aa14.48□□□□□ -0.09
SSBP4-202ENST00000348495 TP53AIP1Q9HCN2 124 aa14.4□□□□□ -0.1
SSBP4-202ENST00000348495 SCGB1A1P11684 91 aa14.39□□□□□ -0.11
SSBP4-202ENST00000348495 OCR1Q9BZK8 76 aa14.38□□□□□ -0.11
SSBP4-202ENST00000348495 ATP11AUNQ6ZP68 121 aa14.38□□□□□ -0.11
SSBP4-202ENST00000348495 ZCCHC13Q8WW36 166 aaKnown RBP14.38□□□□□ -0.11
SSBP4-202ENST00000348495 SEC61BP60468 96 aaKnown RBP14.35□□□□□ -0.11
SSBP4-202ENST00000348495 PCOTHQ58A44 107 aa14.35□□□□□ -0.11
SSBP4-202ENST00000348495 Q5W150 140 aa14.35□□□□□ -0.11
SSBP4-202ENST00000348495 UQCRQO14949 82 aa14.29□□□□□ -0.12
SSBP4-202ENST00000348495 UBR4Q5T4S7 5183 aa14.29□□□□□ -0.12
SSBP4-202ENST00000348495 ATOX1O00244 68 aa14.29□□□□□ -0.12
SSBP4-202ENST00000348495 MUC17Q685J3 4493 aa14.27□□□□□ -0.12
SSBP4-202ENST00000348495 SMIM20Q8N5G0 67 aa14.24□□□□□ -0.13
SSBP4-202ENST00000348495 TRAV22A0A0B4J277 110 aa14.21□□□□□ -0.14
SSBP4-202ENST00000348495 TRAV7A0A075B6U4 112 aa14.19□□□□□ -0.14
SSBP4-202ENST00000348495 H0Y9P7 68 aa14.13□□□□□ -0.15
SSBP4-202ENST00000348495 C5orf47Q569G3 176 aa14.13□□□□□ -0.15
SSBP4-202ENST00000348495 KRTAP4-1Q9BYQ7 146 aa14.12□□□□□ -0.15
SSBP4-202ENST00000348495 SERP2Q8N6R1 65 aa14.11□□□□□ -0.15
SSBP4-202ENST00000348495 SPINK7P58062 85 aa14.07□□□□□ -0.16
SSBP4-202ENST00000348495 IGKV2-30P06310 120 aa14.06□□□□□ -0.16
SSBP4-202ENST00000348495 MP68P56378 58 aa14.06□□□□□ -0.16
SSBP4-202ENST00000348495 IGKV2D-30A0A075B6S6 120 aa14.03□□□□□ -0.16
SSBP4-202ENST00000348495 LOC101927531A0A1B0GV80 90 aa14.01□□□□□ -0.17
SSBP4-202ENST00000348495 C7orf65Q6ZTY9 151 aa14.01□□□□□ -0.17
SSBP4-202ENST00000348495 LINC00208Q96KT6 92 aa14.01□□□□□ -0.17
SSBP4-202ENST00000348495 H3BPC8 53 aa14□□□□□ -0.17
SSBP4-202ENST00000348495 C1orf64Q8NEQ6 169 aa14□□□□□ -0.17
SSBP4-202ENST00000348495 ANAPC13Q9BS18 74 aa13.99□□□□□ -0.17
SSBP4-202ENST00000348495 CYP4F30PQ9H0H9 118 aa13.97□□□□□ -0.17
SSBP4-202ENST00000348495 COX7CP15954 63 aa13.95□□□□□ -0.18
SSBP4-202ENST00000348495 A0A0U1RQV1 116 aa13.92□□□□□ -0.18
SSBP4-202ENST00000348495 RNF213Q63HN8 5207 aa13.9□□□□□ -0.18
SSBP4-202ENST00000348495 MUC2Q02817 5179 aa13.9□□□□□ -0.18
SSBP4-202ENST00000348495 HRES1P13985 223 aa13.9□□□□□ -0.18
SSBP4-202ENST00000348495 C20orf197Q8N268 126 aa13.87□□□□□ -0.19
SSBP4-202ENST00000348495 SNURFQ9Y675 71 aa13.83□□□□□ -0.2
SSBP4-202ENST00000348495 MPLKIPQ8TAP9 179 aa13.82□□□□□ -0.2
SSBP4-202ENST00000348495 KLKP1Q107X0 134 aa13.81□□□□□ -0.2
SSBP4-202ENST00000348495 CCDC179H3BU77 68 aa13.72□□□□□ -0.21
SSBP4-202ENST00000348495 C4orf26Q17RF5 130 aa13.71□□□□□ -0.21
SSBP4-202ENST00000348495 KRTAP19-2Q3LHN2 52 aa13.7□□□□□ -0.22
SSBP4-202ENST00000348495 RBM12B-AS1Q9P1G2 102 aa13.68□□□□□ -0.22
SSBP4-202ENST00000348495 CYSTM1Q9H1C7 97 aa13.65□□□□□ -0.22
SSBP4-202ENST00000348495 COX6B2Q6YFQ2 88 aa13.63□□□□□ -0.23
SSBP4-202ENST00000348495 KRTAP3-1Q9BYR8 98 aa13.58□□□□□ -0.24
SSBP4-202ENST00000348495 NDUFC1O43677 76 aa13.56□□□□□ -0.24
SSBP4-202ENST00000348495 LCE2CQ5TA81 110 aa13.56□□□□□ -0.24
SSBP4-202ENST00000348495 H7BZZ5 65 aa13.55□□□□□ -0.24
SSBP4-202ENST00000348495 FAM236DA0A1B0GTK5 79 aa13.54□□□□□ -0.24
SSBP4-202ENST00000348495 FAM236CP0DP71 79 aa13.54□□□□□ -0.24
SSBP4-202ENST00000348495 SPANXA2-OT1Q8N9U9 137 aa13.48□□□□□ -0.25
SSBP4-202ENST00000348495 H1FX-AS1Q4G0G2 97 aa13.44□□□□□ -0.26
SSBP4-202ENST00000348495 SVIPQ8NHG7 77 aa13.44□□□□□ -0.26
SSBP4-202ENST00000348495 DMAC1Q96GE9 116 aa13.43□□□□□ -0.26
SSBP4-202ENST00000348495 A8MUN3 132 aa13.42□□□□□ -0.26
SSBP4-202ENST00000348495 FAT4Q6V0I7 4981 aa13.41□□□□□ -0.26
SSBP4-202ENST00000348495 FLGP20930 4061 aaPredicted RBP13.31□□□□□ -0.28
SSBP4-202ENST00000348495 MT1HP80294 61 aa13.29□□□□□ -0.28
SSBP4-202ENST00000348495 ACYP2P14621 99 aa13.25□□□□□ -0.29
SSBP4-202ENST00000348495 TMEM258P61165 79 aa13.23□□□□□ -0.29
SSBP4-202ENST00000348495 S4R3F8 94 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms