RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 hDV103S1A0JD37 113 aa8.6□□□□□ -1.03
CTTN-202ENST00000346329 A8MWP4 228 aa8.6□□□□□ -1.03
CTTN-202ENST00000346329 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
CTTN-202ENST00000346329 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
CTTN-202ENST00000346329 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
CTTN-202ENST00000346329 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
CTTN-202ENST00000346329 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
CTTN-202ENST00000346329 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
CTTN-202ENST00000346329 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
CTTN-202ENST00000346329 OCR1Q9BZK8 76 aa8.55□□□□□ -1.04
CTTN-202ENST00000346329 C8orf17Q9NRJ1 99 aa8.55□□□□□ -1.04
CTTN-202ENST00000346329 A0A1B0GVX0 72 aa8.53□□□□□ -1.04
CTTN-202ENST00000346329 PKHD1L1Q86WI1 4243 aa8.53□□□□□ -1.04
CTTN-202ENST00000346329 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.05
CTTN-202ENST00000346329 H0Y9P7 68 aa8.52□□□□□ -1.05
CTTN-202ENST00000346329 SSBP3-AS1Q7Z2R9 100 aa8.5□□□□□ -1.05
CTTN-202ENST00000346329 Q8N1X5 172 aa8.5□□□□□ -1.05
CTTN-202ENST00000346329 Q5W150 140 aa8.48□□□□□ -1.05
CTTN-202ENST00000346329 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
CTTN-202ENST00000346329 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
CTTN-202ENST00000346329 LINC00313P59037 77 aa8.46□□□□□ -1.06
CTTN-202ENST00000346329 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
CTTN-202ENST00000346329 H7BZZ5 65 aa8.44□□□□□ -1.06
CTTN-202ENST00000346329 C1orf64Q8NEQ6 169 aa8.44□□□□□ -1.06
CTTN-202ENST00000346329 LPAP08519 4548 aa8.43□□□□□ -1.06
CTTN-202ENST00000346329 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
CTTN-202ENST00000346329 MP68P56378 58 aa8.42□□□□□ -1.06
CTTN-202ENST00000346329 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
CTTN-202ENST00000346329 HERC2O95714 4834 aa8.4□□□□□ -1.06
CTTN-202ENST00000346329 MPLKIPQ8TAP9 179 aa8.4□□□□□ -1.07
CTTN-202ENST00000346329 Q8N9P0 234 aaPredicted RBP8.39□□□□□ -1.07
CTTN-202ENST00000346329 OXTP01178 125 aa8.39□□□□□ -1.07
CTTN-202ENST00000346329 FAM236DA0A1B0GTK5 79 aa8.39□□□□□ -1.07
CTTN-202ENST00000346329 FAM236CP0DP71 79 aa8.39□□□□□ -1.07
CTTN-202ENST00000346329 LRP2P98164 4655 aa8.39□□□□□ -1.07
CTTN-202ENST00000346329 J3KT08 172 aa8.38□□□□□ -1.07
CTTN-202ENST00000346329 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
CTTN-202ENST00000346329 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
CTTN-202ENST00000346329 A0A1B0GW54 56 aa8.36□□□□□ -1.07
CTTN-202ENST00000346329 FAM229BQ4G0N7 80 aa8.35□□□□□ -1.07
CTTN-202ENST00000346329 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
CTTN-202ENST00000346329 HERC1Q15751 4861 aa8.34□□□□□ -1.07
CTTN-202ENST00000346329 SPINK1P00995 79 aa8.34□□□□□ -1.08
CTTN-202ENST00000346329 MUC2Q02817 5179 aa8.33□□□□□ -1.08
CTTN-202ENST00000346329 KLKP1Q107X0 134 aa8.32□□□□□ -1.08
CTTN-202ENST00000346329 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
CTTN-202ENST00000346329 CD164Q04900 197 aa8.28□□□□□ -1.08
CTTN-202ENST00000346329 TNXBP22105 4242 aa8.27□□□□□ -1.08
CTTN-202ENST00000346329 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
CTTN-202ENST00000346329 TMEM258P61165 79 aa8.26□□□□□ -1.09
CTTN-202ENST00000346329 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
CTTN-202ENST00000346329 KRTAP16-1A8MUX0 517 aa8.2□□□□□ -1.1
CTTN-202ENST00000346329 J3QL48 77 aa8.2□□□□□ -1.1
CTTN-202ENST00000346329 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
CTTN-202ENST00000346329 PSPHP1O15172 72 aa8.17□□□□□ -1.1
CTTN-202ENST00000346329 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.11
CTTN-202ENST00000346329 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
CTTN-202ENST00000346329 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
CTTN-202ENST00000346329 HRES1P13985 223 aa8.13□□□□□ -1.11
CTTN-202ENST00000346329 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
CTTN-202ENST00000346329 KRTAP10-8P60410 259 aa8.12□□□□□ -1.11
CTTN-202ENST00000346329 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
CTTN-202ENST00000346329 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
CTTN-202ENST00000346329 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
CTTN-202ENST00000346329 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
CTTN-202ENST00000346329 BIRC6Q9NR09 4857 aa8.08□□□□□ -1.12
CTTN-202ENST00000346329 NDUFC1O43677 76 aa8.07□□□□□ -1.12
CTTN-202ENST00000346329 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
CTTN-202ENST00000346329 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
CTTN-202ENST00000346329 COA5Q86WW8 74 aa8.04□□□□□ -1.12
CTTN-202ENST00000346329 SERP1Q9Y6X1 66 aa8.04□□□□□ -1.12
CTTN-202ENST00000346329 SPINK7P58062 85 aa8.02□□□□□ -1.12
CTTN-202ENST00000346329 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.13
CTTN-202ENST00000346329 Q5XG85 94 aa8□□□□□ -1.13
CTTN-202ENST00000346329 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
CTTN-202ENST00000346329 KRTAP13-3Q3SY46 172 aa7.99□□□□□ -1.13
CTTN-202ENST00000346329 LOC101927531A0A1B0GV80 90 aa7.98□□□□□ -1.13
CTTN-202ENST00000346329 UBR4Q5T4S7 5183 aa7.98□□□□□ -1.13
CTTN-202ENST00000346329 A8MUN3 132 aa7.97□□□□□ -1.13
CTTN-202ENST00000346329 XP32Q5T750 250 aa7.96□□□□□ -1.13
CTTN-202ENST00000346329 A8MU10 97 aa7.94□□□□□ -1.14
CTTN-202ENST00000346329 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
CTTN-202ENST00000346329 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.15
CTTN-202ENST00000346329 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
CTTN-202ENST00000346329 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
CTTN-202ENST00000346329 H3BPC8 53 aa7.87□□□□□ -1.15
CTTN-202ENST00000346329 A8MUU9 505 aa7.85□□□□□ -1.15
CTTN-202ENST00000346329 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
CTTN-202ENST00000346329 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
CTTN-202ENST00000346329 RPS28P62857 69 aaKnown RBP7.82□□□□□ -1.16
CTTN-202ENST00000346329 ATP5EP56381 51 aaPredicted RBP7.81□□□□□ -1.16
CTTN-202ENST00000346329 ACYP2P14621 99 aa7.81□□□□□ -1.16
CTTN-202ENST00000346329 KRTAP3-1Q9BYR8 98 aa7.78□□□□□ -1.16
CTTN-202ENST00000346329 SPANXA2-OT1Q8N9U9 137 aa7.78□□□□□ -1.16
CTTN-202ENST00000346329 RPL37P61927 97 aaKnown RBP7.77□□□□□ -1.17
CTTN-202ENST00000346329 Q75L30 129 aa7.74□□□□□ -1.17
CTTN-202ENST00000346329 SPTSSBQ8NFR3 76 aa7.73□□□□□ -1.17
CTTN-202ENST00000346329 A6NED7 52 aa7.72□□□□□ -1.17
CTTN-202ENST00000346329 DMAC1Q96GE9 116 aa7.72□□□□□ -1.17
CTTN-202ENST00000346329 KRTAP4-1Q9BYQ7 146 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms