RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 DDX6P26196 483 aaKnown RBP eCLIP14.58□□□□□ -0.087e-18■■■■■ 40
CTTN-202ENST00000346329 ZRANB2O95218 330 aaKnown RBP eCLIP15.74■□□□□ 0.111e-17■■■□□ 18.8
CTTN-202ENST00000346329 DDX3XO00571 662 aaKnown RBP eCLIP16.14■□□□□ 0.188e-15■■■■□ 23.2
CTTN-202ENST00000346329 PCBP1Q15365 356 aaKnown RBP eCLIP15.32■□□□□ 0.041e-13■■■■■ 29.1
CTTN-202ENST00000346329 ILF3Q12906 894 aaKnown RBP eCLIP14.28□□□□□ -0.128e-12■■■■□ 20
CTTN-202ENST00000346329 U2AF2P26368 475 aaKnown RBP eCLIP17.01■□□□□ 0.319e-12■□□□□ 10.9
CTTN-202ENST00000346329 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.02□□□□□ -0.172e-11■■■■■ 29.6
CTTN-202ENST00000346329 CDC40O60508 579 aaKnown RBP eCLIP13.92□□□□□ -0.183e-11■□□□□ 9.2
CTTN-202ENST00000346329 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.64■□□□□ 0.094e-11■■■■□ 26.7
CTTN-202ENST00000346329 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.85e-11■□□□□ 10.1
CTTN-202ENST00000346329 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.477e-11■■■□□ 16.3
CTTN-202ENST00000346329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.25■□□□□ 0.518e-11■■□□□ 12.9
CTTN-202ENST00000346329 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.13■□□□□ 0.331e-10■■■□□ 18.2
CTTN-202ENST00000346329 SUB1P53999 127 aaKnown RBP eCLIP11.78□□□□□ -0.522e-10■■■□□ 18.8
CTTN-202ENST00000346329 LARP4Q71RC2 724 aaKnown RBP eCLIP14.53□□□□□ -0.084e-10■■■□□ 14.7
CTTN-202ENST00000346329 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.96□□□□□ -0.332e-9■■■■□ 25
CTTN-202ENST00000346329 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.33e-9■□□□□ 8.3
CTTN-202ENST00000346329 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.916e-9■□□□□ 10.5
CTTN-202ENST00000346329 NKRFO15226 690 aaKnown RBP eCLIP16.9■□□□□ 0.38e-9■■□□□ 13.5
CTTN-202ENST00000346329 PPIGQ13427 754 aaKnown RBP eCLIP15.02□□□□□ -0.018e-9■■□□□ 13
CTTN-202ENST00000346329 ZC3H11AO75152 810 aaKnown RBP eCLIP15.78■□□□□ 0.121e-8■■□□□ 14.5
CTTN-202ENST00000346329 LSM11P83369 360 aaKnown RBP eCLIP14.22□□□□□ -0.131e-8■■□□□ 11.9
CTTN-202ENST00000346329 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.79■□□□□ 0.122e-8■■□□□ 13.1
CTTN-202ENST00000346329 NCBP2P52298 156 aaKnown RBP eCLIP14.22□□□□□ -0.135e-8■■□□□ 12.8
CTTN-202ENST00000346329 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.34■□□□□ 0.215e-8■■■■□ 21.3
CTTN-202ENST00000346329 HNRNPMP52272 730 aaKnown RBP eCLIP21.83■■□□□ 1.085e-8■■■■■ 27.1
CTTN-202ENST00000346329 SF3A3Q12874 501 aaKnown RBP eCLIP16.09■□□□□ 0.177e-8■■■■□ 20.9
CTTN-202ENST00000346329 TIA1P31483 386 aaKnown RBP eCLIP14.25□□□□□ -0.137e-8■■■□□ 15.5
CTTN-202ENST00000346329 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.258e-8■■■■□ 25.6
CTTN-202ENST00000346329 PUM1Q14671 1186 aaKnown RBP eCLIP14.02□□□□□ -0.178e-8■■□□□ 11.7
CTTN-202ENST00000346329 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.781e-7■□□□□ 9.6
CTTN-202ENST00000346329 GTF2F1P35269 517 aaKnown RBP eCLIP15.9■□□□□ 0.141e-7■■■■■ 37.5
CTTN-202ENST00000346329 KHSRPQ92945 711 aaKnown RBP eCLIP15.96■□□□□ 0.151e-7■■■□□ 15.6
CTTN-202ENST00000346329 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.45□□□□□ -0.261e-7■■■■■ 27.5
CTTN-202ENST00000346329 PABPC4Q13310 644 aaKnown RBP eCLIP16.86■□□□□ 0.291e-7■■□□□ 13.2
CTTN-202ENST00000346329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.081e-7■■■□□ 15.3
CTTN-202ENST00000346329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.58■□□□□ 0.091e-7■□□□□ 10.1
CTTN-202ENST00000346329 HLTFQ14527 1009 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■■□□ 14.7
CTTN-202ENST00000346329 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■□□□ 12.3
CTTN-202ENST00000346329 EFTUD2Q15029 972 aaKnown RBP eCLIP15.6■□□□□ 0.092e-7■■■■□ 24.1
CTTN-202ENST00000346329 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■■■□ 20.6
CTTN-202ENST00000346329 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.513e-7■■■■□ 21.3
CTTN-202ENST00000346329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.953e-7■■■□□ 14.8
CTTN-202ENST00000346329 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.54■□□□□ 0.083e-7■■■■■ 52.1
CTTN-202ENST00000346329 RBM15Q96T37 977 aaKnown RBP eCLIP15.55■□□□□ 0.083e-7■■■■□ 20.8
CTTN-202ENST00000346329 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.943e-7■■□□□ 13.3
CTTN-202ENST00000346329 NOLC1Q14978 699 aaKnown RBP eCLIP16.73■□□□□ 0.273e-7■□□□□ 8.1
CTTN-202ENST00000346329 SF3B4Q15427 424 aaKnown RBP eCLIP12.91□□□□□ -0.344e-7■■■■■ 29.8
CTTN-202ENST00000346329 PCBP2Q15366 365 aaKnown RBP eCLIP14.53□□□□□ -0.084e-7■■■■■ 38.6
CTTN-202ENST00000346329 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.61■□□□□ 0.094e-7■■■■■ 68.5
CTTN-202ENST00000346329 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.444e-7■■■■□ 20.6
CTTN-202ENST00000346329 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.426e-7■■□□□ 11.4
CTTN-202ENST00000346329 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.246e-7■■■□□ 14.9
CTTN-202ENST00000346329 ZNF622Q969S3 477 aaKnown RBP eCLIP17.85■□□□□ 0.456e-7■□□□□ 11
CTTN-202ENST00000346329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.95■□□□□ 0.37e-7■■■■■ 88.8
CTTN-202ENST00000346329 HNRNPCP07910 306 aaKnown RBP eCLIP13.33□□□□□ -0.287e-7■■□□□ 11.9
CTTN-202ENST00000346329 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.11■□□□□ 0.017e-7■■■■■ 44.2
CTTN-202ENST00000346329 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.778e-7■■■□□ 16.3
CTTN-202ENST00000346329 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.65■□□□□ 0.18e-7■■■■□ 21.3
CTTN-202ENST00000346329 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.26□□□□□ -0.298e-7■□□□□ 10.9
CTTN-202ENST00000346329 YWHAGP61981 247 aaKnown RBP eCLIP15.53■□□□□ 0.088e-7■■■■□ 23.8
CTTN-202ENST00000346329 RBM22Q9NW64 420 aaKnown RBP eCLIP15.33■□□□□ 0.049e-7■■■■□ 20.4
CTTN-202ENST00000346329 PRPF4O43172 522 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■■■■□ 20.8
CTTN-202ENST00000346329 TIAL1Q01085 375 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■□□□□ 10.9
CTTN-202ENST00000346329 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.73□□□□□ -0.051e-6■□□□□ 10.8
CTTN-202ENST00000346329 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■■□ 22.4
CTTN-202ENST00000346329 EWSR1Q01844 656 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■□□□ 11.9
CTTN-202ENST00000346329 G3BP1Q13283 466 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■□□□□ 9.5
CTTN-202ENST00000346329 GPKOWQ92917 476 aaPredicted RBP eCLIP17.46■□□□□ 0.392e-6■□□□□ 10.3
CTTN-202ENST00000346329 SF3B1O75533 1304 aaKnown RBP eCLIP15.35■□□□□ 0.052e-6■■■■■ 114.1
CTTN-202ENST00000346329 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■■□□□ 11.7
CTTN-202ENST00000346329 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.89□□□□□ -0.033e-6■■□□□ 12.8
CTTN-202ENST00000346329 SMNDC1O75940 238 aaKnown RBP eCLIP14.47□□□□□ -0.093e-6■■■□□ 15.3
CTTN-202ENST00000346329 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.46□□□□□ -0.253e-6■■□□□ 11.4
CTTN-202ENST00000346329 NONOQ15233 471 aaKnown RBP eCLIP16.93■□□□□ 0.33e-6■■■■■ 28.6
CTTN-202ENST00000346329 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.06■□□□□ 03e-6■■□□□ 12.2
CTTN-202ENST00000346329 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.37□□□□□ -0.113e-6■□□□□ 9.8
CTTN-202ENST00000346329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.01■□□□□ 0.954e-6■■■□□ 15.9
CTTN-202ENST00000346329 PUS1Q9Y606 427 aaKnown RBP eCLIP12.13□□□□□ -0.475e-6■■■□□ 15.6
CTTN-202ENST00000346329 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.82■□□□□ 0.285e-6■■□□□ 13.6
CTTN-202ENST00000346329 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.395e-6■■■■■ 27.9
CTTN-202ENST00000346329 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.266e-6■■□□□ 14.5
CTTN-202ENST00000346329 SRSF9Q13242 221 aaKnown RBP eCLIP10.53□□□□□ -0.727e-6■□□□□ 8.2
Retrieved 83 of 83 RNA–protein pairs in 176.9 ms