RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 C4orf26Q17RF5 130 aa9.28□□□□□ -0.92
RAB5C-201ENST00000346213 HRCT1Q6UXD1 115 aa9.28□□□□□ -0.92
RAB5C-201ENST00000346213 ZNF706Q9Y5V0 76 aaPredicted RBP9.28□□□□□ -0.92
RAB5C-201ENST00000346213 ATP5EP56381 51 aaPredicted RBP9.27□□□□□ -0.93
RAB5C-201ENST00000346213 LINC00483Q53H64 154 aa9.27□□□□□ -0.93
RAB5C-201ENST00000346213 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.93
RAB5C-201ENST00000346213 PRR4Q16378 134 aa9.26□□□□□ -0.93
RAB5C-201ENST00000346213 CYSTM1Q9H1C7 97 aa9.26□□□□□ -0.93
RAB5C-201ENST00000346213 CXCL6P80162 114 aa9.26□□□□□ -0.93
RAB5C-201ENST00000346213 NREPQ16612 68 aa9.25□□□□□ -0.93
RAB5C-201ENST00000346213 MUC2Q02817 5179 aa9.24□□□□□ -0.93
RAB5C-201ENST00000346213 SMIM26A0A096LP01 95 aa9.24□□□□□ -0.93
RAB5C-201ENST00000346213 LINC00304Q8N9R0 145 aa9.24□□□□□ -0.93
RAB5C-201ENST00000346213 TRAV7A0A075B6U4 112 aa9.23□□□□□ -0.93
RAB5C-201ENST00000346213 NDUFC1O43677 76 aa9.23□□□□□ -0.93
RAB5C-201ENST00000346213 A0A0G2JQZ4 141 aa9.21□□□□□ -0.93
RAB5C-201ENST00000346213 LCE2BO14633 110 aa9.21□□□□□ -0.93
RAB5C-201ENST00000346213 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
RAB5C-201ENST00000346213 A0A087WVE0 104 aa9.18□□□□□ -0.94
RAB5C-201ENST00000346213 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
RAB5C-201ENST00000346213 BPY2O14599 106 aa9.16□□□□□ -0.94
RAB5C-201ENST00000346213 H7BZZ5 65 aa9.15□□□□□ -0.94
RAB5C-201ENST00000346213 C20orf197Q8N268 126 aa9.15□□□□□ -0.94
RAB5C-201ENST00000346213 A0A087WSZ3 146 aa9.14□□□□□ -0.95
RAB5C-201ENST00000346213 MOBPQ13875 183 aa9.13□□□□□ -0.95
RAB5C-201ENST00000346213 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
RAB5C-201ENST00000346213 IGKV4-1P06312 121 aa9.1□□□□□ -0.95
RAB5C-201ENST00000346213 DSCR10P59022 87 aa9.07□□□□□ -0.96
RAB5C-201ENST00000346213 IGLV7-46A0A075B6I9 117 aa9.06□□□□□ -0.96
RAB5C-201ENST00000346213 Q8N9L7 120 aa9.06□□□□□ -0.96
RAB5C-201ENST00000346213 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
RAB5C-201ENST00000346213 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
RAB5C-201ENST00000346213 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
RAB5C-201ENST00000346213 LINC00472Q9H8W2 130 aa9.04□□□□□ -0.96
RAB5C-201ENST00000346213 V9GYY9 64 aa9.04□□□□□ -0.96
RAB5C-201ENST00000346213 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
RAB5C-201ENST00000346213 C1orf195Q5TG92 126 aa9□□□□□ -0.97
RAB5C-201ENST00000346213 K7EQZ3 153 aa9□□□□□ -0.97
RAB5C-201ENST00000346213 SPINK1P00995 79 aa9□□□□□ -0.97
RAB5C-201ENST00000346213 CD164Q04900 197 aa9□□□□□ -0.97
RAB5C-201ENST00000346213 DEFB116Q30KQ4 102 aa9□□□□□ -0.97
RAB5C-201ENST00000346213 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
RAB5C-201ENST00000346213 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
RAB5C-201ENST00000346213 Q96NJ1 140 aa8.96□□□□□ -0.98
RAB5C-201ENST00000346213 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
RAB5C-201ENST00000346213 SEC61GP60059 68 aa8.95□□□□□ -0.98
RAB5C-201ENST00000346213 A8MWP4 228 aa8.94□□□□□ -0.98
RAB5C-201ENST00000346213 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
RAB5C-201ENST00000346213 PRR15Q8IV56 129 aa8.93□□□□□ -0.98
RAB5C-201ENST00000346213 KRTAP4-1Q9BYQ7 146 aa8.92□□□□□ -0.98
RAB5C-201ENST00000346213 HCG22E2RYF7 251 aa8.91□□□□□ -0.98
RAB5C-201ENST00000346213 BRK1Q8WUW1 75 aa8.91□□□□□ -0.98
RAB5C-201ENST00000346213 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
RAB5C-201ENST00000346213 SNURFQ9Y675 71 aa8.91□□□□□ -0.98
RAB5C-201ENST00000346213 NDUFB1O75438 58 aa8.89□□□□□ -0.99
RAB5C-201ENST00000346213 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
RAB5C-201ENST00000346213 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
RAB5C-201ENST00000346213 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
RAB5C-201ENST00000346213 WFDC13Q8IUB5 93 aa8.83□□□□□ -1
RAB5C-201ENST00000346213 MMP24-AS1A0A0U1RRL7 71 aa8.82□□□□□ -1
RAB5C-201ENST00000346213 A0A1B0GVX0 72 aa8.82□□□□□ -1
RAB5C-201ENST00000346213 XP32Q5T750 250 aa8.82□□□□□ -1
RAB5C-201ENST00000346213 LCE2AQ5TA79 106 aaPredicted RBP8.82□□□□□ -1
RAB5C-201ENST00000346213 CASC2Q6XLA1 102 aa8.82□□□□□ -1
RAB5C-201ENST00000346213 Q1T7F1 81 aa8.8□□□□□ -1
RAB5C-201ENST00000346213 LIMD2Q9BT23 127 aa8.8□□□□□ -1
RAB5C-201ENST00000346213 C8orf17Q9NRJ1 99 aa8.78□□□□□ -1
RAB5C-201ENST00000346213 PMAIP1Q13794 54 aa8.78□□□□□ -1
RAB5C-201ENST00000346213 hDV103S1A0JD37 113 aa8.77□□□□□ -1.01
RAB5C-201ENST00000346213 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
RAB5C-201ENST00000346213 C9orf92A6NGG3 77 aa8.75□□□□□ -1.01
RAB5C-201ENST00000346213 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
RAB5C-201ENST00000346213 C8orf87E5RJ46 101 aa8.71□□□□□ -1.02
RAB5C-201ENST00000346213 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
RAB5C-201ENST00000346213 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
RAB5C-201ENST00000346213 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
RAB5C-201ENST00000346213 LOC100996750A0A140TA64 210 aa8.67□□□□□ -1.02
RAB5C-201ENST00000346213 KRTAP19-2Q3LHN2 52 aa8.67□□□□□ -1.02
RAB5C-201ENST00000346213 KRTAP4-6Q9BYQ5 205 aa8.67□□□□□ -1.02
RAB5C-201ENST00000346213 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
RAB5C-201ENST00000346213 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
RAB5C-201ENST00000346213 PCOTHQ58A44 107 aa8.65□□□□□ -1.03
RAB5C-201ENST00000346213 LCE2CQ5TA81 110 aa8.65□□□□□ -1.03
RAB5C-201ENST00000346213 ZCCHC13Q8WW36 166 aaKnown RBP8.65□□□□□ -1.03
RAB5C-201ENST00000346213 LINC00313P59037 77 aa8.64□□□□□ -1.03
RAB5C-201ENST00000346213 MP68P56378 58 aa8.63□□□□□ -1.03
RAB5C-201ENST00000346213 H3BPC8 53 aa8.62□□□□□ -1.03
RAB5C-201ENST00000346213 H0Y9P7 68 aa8.61□□□□□ -1.03
RAB5C-201ENST00000346213 C1orf64Q8NEQ6 169 aa8.6□□□□□ -1.03
RAB5C-201ENST00000346213 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
RAB5C-201ENST00000346213 NDUFS5O43920 106 aa8.59□□□□□ -1.03
RAB5C-201ENST00000346213 LINC00208Q96KT6 92 aa8.56□□□□□ -1.04
RAB5C-201ENST00000346213 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
RAB5C-201ENST00000346213 RPL37P61927 97 aaKnown RBP8.55□□□□□ -1.04
RAB5C-201ENST00000346213 Q8N9P0 234 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-201ENST00000346213 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
RAB5C-201ENST00000346213 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
RAB5C-201ENST00000346213 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
RAB5C-201ENST00000346213 Q5W150 140 aa8.47□□□□□ -1.05
RAB5C-201ENST00000346213 MT1HP80294 61 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms