RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 KRTAP13-1Q8IUC0 172 aa5.66□□□□□ -1.5
ATG4A-202ENST00000345734 C1orf137Q5JT78 98 aa5.65□□□□□ -1.5
ATG4A-202ENST00000345734 A0A0G2JQZ4 141 aa5.65□□□□□ -1.51
ATG4A-202ENST00000345734 A0A1W2PNM2 257 aa5.65□□□□□ -1.51
ATG4A-202ENST00000345734 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.51
ATG4A-202ENST00000345734 BPY2O14599 106 aa5.64□□□□□ -1.51
ATG4A-202ENST00000345734 RYR2Q92736 4967 aa5.64□□□□□ -1.51
ATG4A-202ENST00000345734 DYNC1H1Q14204 4646 aaKnown RBP5.64□□□□□ -1.51
ATG4A-202ENST00000345734 A6NN06 94 aa5.63□□□□□ -1.51
ATG4A-202ENST00000345734 CYP4F30PQ9H0H9 118 aa5.63□□□□□ -1.51
ATG4A-202ENST00000345734 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
ATG4A-202ENST00000345734 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
ATG4A-202ENST00000345734 HAMPP81172 84 aa5.62□□□□□ -1.51
ATG4A-202ENST00000345734 OCR1Q9BZK8 76 aa5.62□□□□□ -1.51
ATG4A-202ENST00000345734 PSPHP1O15172 72 aa5.62□□□□□ -1.51
ATG4A-202ENST00000345734 SPRR1BP22528 89 aa5.62□□□□□ -1.51
ATG4A-202ENST00000345734 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
ATG4A-202ENST00000345734 IGFL1Q6UW32 110 aa5.61□□□□□ -1.51
ATG4A-202ENST00000345734 Q8NBF4 154 aa5.61□□□□□ -1.51
ATG4A-202ENST00000345734 C1orf64Q8NEQ6 169 aa5.61□□□□□ -1.51
ATG4A-202ENST00000345734 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
ATG4A-202ENST00000345734 SCXQ7RTU7 201 aa5.6□□□□□ -1.51
ATG4A-202ENST00000345734 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
ATG4A-202ENST00000345734 IGLV8-61A0A075B6I0 122 aa5.6□□□□□ -1.51
ATG4A-202ENST00000345734 Q5VV11 94 aa5.6□□□□□ -1.51
ATG4A-202ENST00000345734 LCE6AA0A183 80 aa5.59□□□□□ -1.51
ATG4A-202ENST00000345734 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
ATG4A-202ENST00000345734 A8MUN3 132 aa5.59□□□□□ -1.52
ATG4A-202ENST00000345734 ZNF861PO60384 105 aa5.57□□□□□ -1.52
ATG4A-202ENST00000345734 Q6ZSA8 131 aa5.57□□□□□ -1.52
ATG4A-202ENST00000345734 APOBP04114 4563 aaKnown RBP5.56□□□□□ -1.52
ATG4A-202ENST00000345734 HCG22E2RYF7 251 aa5.56□□□□□ -1.52
ATG4A-202ENST00000345734 A0A1B0GW54 56 aa5.56□□□□□ -1.52
ATG4A-202ENST00000345734 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
ATG4A-202ENST00000345734 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
ATG4A-202ENST00000345734 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
ATG4A-202ENST00000345734 ANAPC11Q9NYG5 84 aa5.56□□□□□ -1.52
ATG4A-202ENST00000345734 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
ATG4A-202ENST00000345734 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
ATG4A-202ENST00000345734 Q8N9L7 120 aa5.55□□□□□ -1.52
ATG4A-202ENST00000345734 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
ATG4A-202ENST00000345734 NDUFB1O75438 58 aa5.54□□□□□ -1.52
ATG4A-202ENST00000345734 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
ATG4A-202ENST00000345734 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
ATG4A-202ENST00000345734 A0A087WSZ3 146 aa5.53□□□□□ -1.52
ATG4A-202ENST00000345734 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
ATG4A-202ENST00000345734 ZNF706Q9Y5V0 76 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-202ENST00000345734 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
ATG4A-202ENST00000345734 FAT1Q14517 4588 aa5.52□□□□□ -1.53
ATG4A-202ENST00000345734 IGKV4-1P06312 121 aa5.51□□□□□ -1.53
ATG4A-202ENST00000345734 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
ATG4A-202ENST00000345734 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
ATG4A-202ENST00000345734 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
ATG4A-202ENST00000345734 RYR3Q15413 4870 aa5.5□□□□□ -1.53
ATG4A-202ENST00000345734 MOBPQ13875 183 aa5.5□□□□□ -1.53
ATG4A-202ENST00000345734 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
ATG4A-202ENST00000345734 A8MU10 97 aa5.49□□□□□ -1.53
ATG4A-202ENST00000345734 DSCR10P59022 87 aa5.49□□□□□ -1.53
ATG4A-202ENST00000345734 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
ATG4A-202ENST00000345734 Q8N9P0 234 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-202ENST00000345734 A0A1B0GVY2 172 aa5.48□□□□□ -1.53
ATG4A-202ENST00000345734 A0A087X002 238 aa5.48□□□□□ -1.53
ATG4A-202ENST00000345734 A6NED7 52 aa5.47□□□□□ -1.53
ATG4A-202ENST00000345734 K7EQZ3 153 aa5.47□□□□□ -1.53
ATG4A-202ENST00000345734 SPANXA2-OT1Q8N9U9 137 aa5.47□□□□□ -1.53
ATG4A-202ENST00000345734 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
ATG4A-202ENST00000345734 RPL37AP61513 92 aaKnown RBP5.45□□□□□ -1.54
ATG4A-202ENST00000345734 LINC00472Q9H8W2 130 aa5.45□□□□□ -1.54
ATG4A-202ENST00000345734 LINC00313P59037 77 aa5.43□□□□□ -1.54
ATG4A-202ENST00000345734 LINC00208Q96KT6 92 aa5.43□□□□□ -1.54
ATG4A-202ENST00000345734 MP68P56378 58 aa5.42□□□□□ -1.54
ATG4A-202ENST00000345734 Q96NJ1 140 aa5.42□□□□□ -1.54
ATG4A-202ENST00000345734 SMR3BP02814 79 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-202ENST00000345734 CASC2Q6XLA1 102 aa5.41□□□□□ -1.54
ATG4A-202ENST00000345734 KRTAP13-2Q52LG2 175 aa5.41□□□□□ -1.54
ATG4A-202ENST00000345734 PKHD1L1Q86WI1 4243 aa5.4□□□□□ -1.54
ATG4A-202ENST00000345734 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.54
ATG4A-202ENST00000345734 HSPG2P98160 4391 aa5.39□□□□□ -1.55
ATG4A-202ENST00000345734 A8MWP4 228 aa5.39□□□□□ -1.55
ATG4A-202ENST00000345734 H3BPC8 53 aa5.39□□□□□ -1.55
ATG4A-202ENST00000345734 SSBP3-AS1Q7Z2R9 100 aa5.38□□□□□ -1.55
ATG4A-202ENST00000345734 WFDC13Q8IUB5 93 aa5.38□□□□□ -1.55
ATG4A-202ENST00000345734 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
ATG4A-202ENST00000345734 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
ATG4A-202ENST00000345734 CDK2AP2O75956 126 aa5.35□□□□□ -1.55
ATG4A-202ENST00000345734 SPINK6Q6UWN8 80 aa5.35□□□□□ -1.55
ATG4A-202ENST00000345734 RYR1P21817 5038 aa5.34□□□□□ -1.55
ATG4A-202ENST00000345734 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-202ENST00000345734 IGKV2D-30A0A075B6S6 120 aa5.33□□□□□ -1.56
ATG4A-202ENST00000345734 KRTAP10-4P60372 401 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-202ENST00000345734 MMP24-AS1A0A0U1RRL7 71 aa5.33□□□□□ -1.56
ATG4A-202ENST00000345734 PRR4Q16378 134 aa5.32□□□□□ -1.56
ATG4A-202ENST00000345734 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
ATG4A-202ENST00000345734 A0A1B0GVX0 72 aa5.3□□□□□ -1.56
ATG4A-202ENST00000345734 TYMSOSQ8TAI1 123 aa5.3□□□□□ -1.56
ATG4A-202ENST00000345734 NOTCH2NLQ7Z3S9 236 aa5.3□□□□□ -1.56
ATG4A-202ENST00000345734 C8orf17Q9NRJ1 99 aa5.3□□□□□ -1.56
ATG4A-202ENST00000345734 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
ATG4A-202ENST00000345734 EPPK1P58107 5090 aaKnown RBP5.29□□□□□ -1.56
ATG4A-202ENST00000345734 TNXBP22105 4242 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms