RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 CRYBG3Q68DQ2 2970 aa4.54□□□□□ -1.68
LIN28B-201ENST00000345080 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
LIN28B-201ENST00000345080 ASH1LQ9NR48 2969 aaKnown RBP4.52□□□□□ -1.69
LIN28B-201ENST00000345080 LRBAP50851 2863 aa4.52□□□□□ -1.69
LIN28B-201ENST00000345080 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
LIN28B-201ENST00000345080 ANKRD11Q6UB99 2663 aaPredicted RBP4.5□□□□□ -1.69
LIN28B-201ENST00000345080 HRNRQ86YZ3 2850 aaPredicted RBP4.5□□□□□ -1.69
LIN28B-201ENST00000345080 UTP20O75691 2785 aaKnown RBP4.5□□□□□ -1.69
LIN28B-201ENST00000345080 CELSR2Q9HCU4 2923 aa4.49□□□□□ -1.69
LIN28B-201ENST00000345080 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
LIN28B-201ENST00000345080 CFAP46Q8IYW2 2715 aa4.47□□□□□ -1.69
LIN28B-201ENST00000345080 TEP1Q99973 2627 aaKnown RBP4.47□□□□□ -1.69
LIN28B-201ENST00000345080 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.7
LIN28B-201ENST00000345080 CEP295Q9C0D2 2601 aa4.46□□□□□ -1.7
LIN28B-201ENST00000345080 KRTAP10-2P60368 255 aa4.46□□□□□ -1.7
LIN28B-201ENST00000345080 NSD1Q96L73 2696 aaPredicted RBP4.45□□□□□ -1.7
LIN28B-201ENST00000345080 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
LIN28B-201ENST00000345080 HELZ2Q9BYK8 2649 aaKnown RBP4.44□□□□□ -1.7
LIN28B-201ENST00000345080 CUBNO60494 3623 aa4.44□□□□□ -1.7
LIN28B-201ENST00000345080 UNC79Q9P2D8 2635 aa4.44□□□□□ -1.7
LIN28B-201ENST00000345080 TACC2O95359 2948 aa4.44□□□□□ -1.7
LIN28B-201ENST00000345080 BAHCC1Q9P281 2608 aa4.43□□□□□ -1.7
LIN28B-201ENST00000345080 AKAP9Q99996 3911 aa4.43□□□□□ -1.7
LIN28B-201ENST00000345080 NBEAL1Q6ZS30 2694 aa4.43□□□□□ -1.7
LIN28B-201ENST00000345080 TENM4Q6N022 2769 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 STAB1Q9NY15 2570 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 IGSF10Q6WRI0 2623 aa4.41□□□□□ -1.7
LIN28B-201ENST00000345080 MAST4O15021 2626 aa4.4□□□□□ -1.7
LIN28B-201ENST00000345080 FBN2P35556 2912 aa4.39□□□□□ -1.71
LIN28B-201ENST00000345080 KMT2BQ9UMN6 2715 aaPredicted RBP4.38□□□□□ -1.71
LIN28B-201ENST00000345080 FLNCQ14315 2725 aa4.37□□□□□ -1.71
LIN28B-201ENST00000345080 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
LIN28B-201ENST00000345080 P0C880 135 aa4.36□□□□□ -1.71
LIN28B-201ENST00000345080 KRTAP13-1Q8IUC0 172 aa4.36□□□□□ -1.71
LIN28B-201ENST00000345080 UBR5O95071 2799 aaPredicted RBP4.35□□□□□ -1.71
LIN28B-201ENST00000345080 ITPR3Q14573 2671 aa4.34□□□□□ -1.71
LIN28B-201ENST00000345080 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.72
LIN28B-201ENST00000345080 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
LIN28B-201ENST00000345080 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
LIN28B-201ENST00000345080 H0YAA0 97 aa4.31□□□□□ -1.72
LIN28B-201ENST00000345080 CENPEQ02224 2701 aa4.27□□□□□ -1.73
LIN28B-201ENST00000345080 MAP1AP78559 2803 aaPredicted RBP4.27□□□□□ -1.73
LIN28B-201ENST00000345080 CHD6Q8TD26 2715 aa4.26□□□□□ -1.73
LIN28B-201ENST00000345080 TNP1P09430 55 aa4.25□□□□□ -1.73
LIN28B-201ENST00000345080 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
LIN28B-201ENST00000345080 COL6A5A8TX70 2615 aa4.24□□□□□ -1.73
LIN28B-201ENST00000345080 PDZD2O15018 2839 aa4.24□□□□□ -1.73
LIN28B-201ENST00000345080 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
LIN28B-201ENST00000345080 GCN1Q92616 2671 aaKnown RBP4.22□□□□□ -1.73
LIN28B-201ENST00000345080 ANK3Q12955 4377 aaKnown RBP4.22□□□□□ -1.73
LIN28B-201ENST00000345080 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
LIN28B-201ENST00000345080 APCP25054 2843 aa4.21□□□□□ -1.74
LIN28B-201ENST00000345080 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
LIN28B-201ENST00000345080 MXRA5Q9NR99 2828 aa4.19□□□□□ -1.74
LIN28B-201ENST00000345080 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
LIN28B-201ENST00000345080 FLNAP21333 2647 aaKnown RBP4.17□□□□□ -1.74
LIN28B-201ENST00000345080 OTOGQ6ZRI0 2925 aa4.16□□□□□ -1.74
LIN28B-201ENST00000345080 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
LIN28B-201ENST00000345080 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
LIN28B-201ENST00000345080 ITPR2Q14571 2701 aa4.12□□□□□ -1.75
LIN28B-201ENST00000345080 KRTAP13-2Q52LG2 175 aa4.11□□□□□ -1.75
LIN28B-201ENST00000345080 A0A1B0GVY2 172 aa4.1□□□□□ -1.75
LIN28B-201ENST00000345080 NIPBLQ6KC79 2804 aaeCLIP4.09□□□□□ -1.75
LIN28B-201ENST00000345080 TEX15Q9BXT5 2789 aa4.09□□□□□ -1.76
LIN28B-201ENST00000345080 FLNBO75369 2602 aaKnown RBP4.08□□□□□ -1.76
LIN28B-201ENST00000345080 ANK2Q01484 3957 aa4.08□□□□□ -1.76
LIN28B-201ENST00000345080 NF1P21359 2839 aa4.08□□□□□ -1.76
LIN28B-201ENST00000345080 NBEAL2Q6ZNJ1 2754 aa4.07□□□□□ -1.76
LIN28B-201ENST00000345080 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
LIN28B-201ENST00000345080 INE1O15225 51 aa4.02□□□□□ -1.77
LIN28B-201ENST00000345080 SETXQ7Z333 2677 aaKnown RBP4.01□□□□□ -1.77
LIN28B-201ENST00000345080 TRRAPQ9Y4A5 3859 aa4.01□□□□□ -1.77
LIN28B-201ENST00000345080 DNAH3Q8TD57 4116 aa3.99□□□□□ -1.77
LIN28B-201ENST00000345080 KRTAP1-4P0C5Y4 121 aa3.97□□□□□ -1.77
LIN28B-201ENST00000345080 TENM1Q9UKZ4 2725 aa3.97□□□□□ -1.77
LIN28B-201ENST00000345080 VWFP04275 2813 aa3.97□□□□□ -1.77
LIN28B-201ENST00000345080 XP32Q5T750 250 aa3.96□□□□□ -1.77
LIN28B-201ENST00000345080 FBN1P35555 2871 aaKnown RBP3.96□□□□□ -1.78
LIN28B-201ENST00000345080 HIVEP1P15822 2718 aa3.94□□□□□ -1.78
LIN28B-201ENST00000345080 PKD1L1Q8TDX9 2849 aa3.91□□□□□ -1.78
LIN28B-201ENST00000345080 KRTAP12-2P59991 146 aa3.9□□□□□ -1.78
LIN28B-201ENST00000345080 DNHD1Q96M86 4753 aa3.89□□□□□ -1.79
LIN28B-201ENST00000345080 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
LIN28B-201ENST00000345080 LYSTQ99698 3801 aa3.87□□□□□ -1.79
LIN28B-201ENST00000345080 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
LIN28B-201ENST00000345080 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
LIN28B-201ENST00000345080 COL7A1Q02388 2944 aa3.82□□□□□ -1.8
LIN28B-201ENST00000345080 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
LIN28B-201ENST00000345080 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
LIN28B-201ENST00000345080 PRKDCP78527 4128 aaKnown RBP3.78□□□□□ -1.8
LIN28B-201ENST00000345080 TGP01266 2768 aa3.76□□□□□ -1.81
LIN28B-201ENST00000345080 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
LIN28B-201ENST00000345080 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
LIN28B-201ENST00000345080 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
LIN28B-201ENST00000345080 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
LIN28B-201ENST00000345080 TENM3Q9P273 2699 aa3.75□□□□□ -1.81
LIN28B-201ENST00000345080 HUWE1Q7Z6Z7 4374 aaKnown RBP3.75□□□□□ -1.81
LIN28B-201ENST00000345080 DNAH9Q9NYC9 4486 aa3.74□□□□□ -1.81
LIN28B-201ENST00000345080 DYNC2H1Q8NCM8 4307 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms