RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 XP32Q5T750 250 aa11.43□□□□□ -0.58
SMARCB1-202ENST00000344921 COX7CP15954 63 aa11.4□□□□□ -0.58
SMARCB1-202ENST00000344921 PDE6GP18545 87 aa11.4□□□□□ -0.58
SMARCB1-202ENST00000344921 Q6ZQT0 140 aa11.4□□□□□ -0.58
SMARCB1-202ENST00000344921 LOC110117498A0A087WWA1 95 aa11.4□□□□□ -0.58
SMARCB1-202ENST00000344921 Q96NJ1 140 aa11.39□□□□□ -0.59
SMARCB1-202ENST00000344921 ATP5EP2Q5VTU8 51 aa11.38□□□□□ -0.59
SMARCB1-202ENST00000344921 RNF213Q63HN8 5207 aa11.36□□□□□ -0.59
SMARCB1-202ENST00000344921 IGKV4-1P06312 121 aa11.35□□□□□ -0.59
SMARCB1-202ENST00000344921 SEC61BP60468 96 aaKnown RBP11.35□□□□□ -0.59
SMARCB1-202ENST00000344921 DEFB116Q30KQ4 102 aa11.35□□□□□ -0.59
SMARCB1-202ENST00000344921 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
SMARCB1-202ENST00000344921 SMIM20Q8N5G0 67 aa11.33□□□□□ -0.6
SMARCB1-202ENST00000344921 LINC00472Q9H8W2 130 aa11.32□□□□□ -0.6
SMARCB1-202ENST00000344921 A0A1B0GW54 56 aa11.31□□□□□ -0.6
SMARCB1-202ENST00000344921 MUC17Q685J3 4493 aa11.29□□□□□ -0.6
SMARCB1-202ENST00000344921 SERP2Q8N6R1 65 aa11.29□□□□□ -0.6
SMARCB1-202ENST00000344921 RPS28P62857 69 aaKnown RBP11.26□□□□□ -0.61
SMARCB1-202ENST00000344921 IGKV3D-7A0A0C4DH55 119 aa11.25□□□□□ -0.61
SMARCB1-202ENST00000344921 MUC2Q02817 5179 aa11.24□□□□□ -0.61
SMARCB1-202ENST00000344921 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
SMARCB1-202ENST00000344921 DSCR10P59022 87 aa11.22□□□□□ -0.61
SMARCB1-202ENST00000344921 TMEM258P61165 79 aa11.22□□□□□ -0.61
SMARCB1-202ENST00000344921 J3KT08 172 aa11.21□□□□□ -0.61
SMARCB1-202ENST00000344921 RPL37P61927 97 aaKnown RBP11.21□□□□□ -0.61
SMARCB1-202ENST00000344921 PCOTHQ58A44 107 aa11.21□□□□□ -0.61
SMARCB1-202ENST00000344921 NREPQ16612 68 aa11.21□□□□□ -0.62
SMARCB1-202ENST00000344921 IGHV6-1A0A0B4J1U7 121 aa11.2□□□□□ -0.62
SMARCB1-202ENST00000344921 LINC00313P59037 77 aa11.2□□□□□ -0.62
SMARCB1-202ENST00000344921 NDUFB1O75438 58 aa11.15□□□□□ -0.63
SMARCB1-202ENST00000344921 A0A087WVE0 104 aa11.14□□□□□ -0.63
SMARCB1-202ENST00000344921 A0A1B0GVX0 72 aa11.14□□□□□ -0.63
SMARCB1-202ENST00000344921 Q75L30 129 aa11.14□□□□□ -0.63
SMARCB1-202ENST00000344921 A0A0U1RQV1 116 aa11.12□□□□□ -0.63
SMARCB1-202ENST00000344921 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
SMARCB1-202ENST00000344921 NOTCH2NLQ7Z3S9 236 aa11.12□□□□□ -0.63
SMARCB1-202ENST00000344921 KRTAP4-1Q9BYQ7 146 aa11.11□□□□□ -0.63
SMARCB1-202ENST00000344921 C8orf87E5RJ46 101 aa11.09□□□□□ -0.63
SMARCB1-202ENST00000344921 CXCL6P80162 114 aa11.09□□□□□ -0.63
SMARCB1-202ENST00000344921 C20orf166-AS1Q96NR2 134 aa11.09□□□□□ -0.63
SMARCB1-202ENST00000344921 A8MWP4 228 aa11.09□□□□□ -0.63
SMARCB1-202ENST00000344921 A8MUU9 505 aa11.06□□□□□ -0.64
SMARCB1-202ENST00000344921 TRAV7A0A075B6U4 112 aa11.04□□□□□ -0.64
SMARCB1-202ENST00000344921 KRTAP16-1A8MUX0 517 aa11.04□□□□□ -0.64
SMARCB1-202ENST00000344921 Q6ZVQ6 151 aa11.04□□□□□ -0.64
SMARCB1-202ENST00000344921 BPY2O14599 106 aa11.03□□□□□ -0.64
SMARCB1-202ENST00000344921 CYSTM1Q9H1C7 97 aa11.01□□□□□ -0.65
SMARCB1-202ENST00000344921 PRR15Q8IV56 129 aa11.01□□□□□ -0.65
SMARCB1-202ENST00000344921 C8orf17Q9NRJ1 99 aa11□□□□□ -0.65
SMARCB1-202ENST00000344921 K7EQZ3 153 aa10.96□□□□□ -0.65
SMARCB1-202ENST00000344921 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
SMARCB1-202ENST00000344921 NDUFC1O43677 76 aa10.92□□□□□ -0.66
SMARCB1-202ENST00000344921 C5orf47Q569G3 176 aa10.92□□□□□ -0.66
SMARCB1-202ENST00000344921 C20orf197Q8N268 126 aa10.92□□□□□ -0.66
SMARCB1-202ENST00000344921 FAM236DA0A1B0GTK5 79 aa10.9□□□□□ -0.66
SMARCB1-202ENST00000344921 FAM236CP0DP71 79 aa10.9□□□□□ -0.66
SMARCB1-202ENST00000344921 Q8N9L7 120 aa10.89□□□□□ -0.67
SMARCB1-202ENST00000344921 MMP24-AS1A0A0U1RRL7 71 aa10.89□□□□□ -0.67
SMARCB1-202ENST00000344921 FAT4Q6V0I7 4981 aa10.88□□□□□ -0.67
SMARCB1-202ENST00000344921 H7BZZ5 65 aa10.87□□□□□ -0.67
SMARCB1-202ENST00000344921 ATP5EP56381 51 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-202ENST00000344921 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-202ENST00000344921 SERP1Q9Y6X1 66 aa10.87□□□□□ -0.67
SMARCB1-202ENST00000344921 hDV103S1A0JD37 113 aa10.86□□□□□ -0.67
SMARCB1-202ENST00000344921 TMEM254Q8TBM7 123 aa10.85□□□□□ -0.67
SMARCB1-202ENST00000344921 MRPL34Q9BQ48 92 aaKnown RBP10.84□□□□□ -0.67
SMARCB1-202ENST00000344921 ZCCHC13Q8WW36 166 aaKnown RBP10.81□□□□□ -0.68
SMARCB1-202ENST00000344921 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
SMARCB1-202ENST00000344921 NDUFS5O43920 106 aa10.8□□□□□ -0.68
SMARCB1-202ENST00000344921 CASC2Q6XLA1 102 aa10.78□□□□□ -0.68
SMARCB1-202ENST00000344921 COX6B2Q6YFQ2 88 aa10.77□□□□□ -0.69
SMARCB1-202ENST00000344921 KRTAP19-2Q3LHN2 52 aa10.75□□□□□ -0.69
SMARCB1-202ENST00000344921 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-202ENST00000344921 HCG22E2RYF7 251 aa10.72□□□□□ -0.69
SMARCB1-202ENST00000344921 LCE2CQ5TA81 110 aa10.72□□□□□ -0.69
SMARCB1-202ENST00000344921 SMIM26A0A096LP01 95 aa10.7□□□□□ -0.7
SMARCB1-202ENST00000344921 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
SMARCB1-202ENST00000344921 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
SMARCB1-202ENST00000344921 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
SMARCB1-202ENST00000344921 SPINK7P58062 85 aa10.65□□□□□ -0.7
SMARCB1-202ENST00000344921 HRES1P13985 223 aa10.6□□□□□ -0.71
SMARCB1-202ENST00000344921 MT1HP80294 61 aa10.6□□□□□ -0.71
SMARCB1-202ENST00000344921 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
SMARCB1-202ENST00000344921 Q5W150 140 aa10.58□□□□□ -0.72
SMARCB1-202ENST00000344921 M0R2T5 61 aa10.54□□□□□ -0.72
SMARCB1-202ENST00000344921 IGKV2D-30A0A075B6S6 120 aa10.52□□□□□ -0.73
SMARCB1-202ENST00000344921 IGKV2-30P06310 120 aa10.52□□□□□ -0.73
SMARCB1-202ENST00000344921 MPLKIPQ8TAP9 179 aa10.52□□□□□ -0.73
SMARCB1-202ENST00000344921 TP53AIP1Q9HCN2 124 aa10.5□□□□□ -0.73
SMARCB1-202ENST00000344921 PRO0628Q9UI54 55 aa10.49□□□□□ -0.73
SMARCB1-202ENST00000344921 C7orf65Q6ZTY9 151 aa10.47□□□□□ -0.73
SMARCB1-202ENST00000344921 FLGP20930 4061 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-202ENST00000344921 CYP4F30PQ9H0H9 118 aa10.38□□□□□ -0.75
SMARCB1-202ENST00000344921 H3BPC8 53 aa10.36□□□□□ -0.75
SMARCB1-202ENST00000344921 MP68P56378 58 aa10.33□□□□□ -0.76
SMARCB1-202ENST00000344921 KRTAP10-6P60371 365 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-202ENST00000344921 TRAV22A0A0B4J277 110 aa10.32□□□□□ -0.76
SMARCB1-202ENST00000344921 Q1T7F1 81 aa10.3□□□□□ -0.76
SMARCB1-202ENST00000344921 LORP23490 312 aaPredicted RBP10.29□□□□□ -0.76
SMARCB1-202ENST00000344921 SPANXA2-OT1Q8N9U9 137 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms