RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 DNAH5Q8TE73 4624 aa6.47□□□□□ -1.37
CAPRIN1-201ENST00000341394 DNAH8Q96JB1 4490 aa6.46□□□□□ -1.37
CAPRIN1-201ENST00000341394 TNP2Q05952 138 aa6.46□□□□□ -1.38
CAPRIN1-201ENST00000341394 Q6ZRN7 208 aaPredicted RBP6.46□□□□□ -1.38
CAPRIN1-201ENST00000341394 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
CAPRIN1-201ENST00000341394 PKHD1P08F94 4074 aa6.45□□□□□ -1.38
CAPRIN1-201ENST00000341394 ACYP2P14621 99 aa6.45□□□□□ -1.38
CAPRIN1-201ENST00000341394 PKD1P98161 4303 aa6.44□□□□□ -1.38
CAPRIN1-201ENST00000341394 LINC00313P59037 77 aa6.44□□□□□ -1.38
CAPRIN1-201ENST00000341394 Q8N1X5 172 aa6.44□□□□□ -1.38
CAPRIN1-201ENST00000341394 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
CAPRIN1-201ENST00000341394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
CAPRIN1-201ENST00000341394 Q96NJ1 140 aa6.43□□□□□ -1.38
CAPRIN1-201ENST00000341394 TP53AIP1Q9HCN2 124 aa6.43□□□□□ -1.38
CAPRIN1-201ENST00000341394 SMR3BP02814 79 aaPredicted RBP6.41□□□□□ -1.38
CAPRIN1-201ENST00000341394 Q8N9P0 234 aaPredicted RBP6.41□□□□□ -1.38
CAPRIN1-201ENST00000341394 A0A1B0GVX0 72 aa6.4□□□□□ -1.38
CAPRIN1-201ENST00000341394 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
CAPRIN1-201ENST00000341394 SPRR4Q96PI1 79 aa6.4□□□□□ -1.38
CAPRIN1-201ENST00000341394 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
CAPRIN1-201ENST00000341394 A0A1B0GW54 56 aa6.4□□□□□ -1.39
CAPRIN1-201ENST00000341394 SPINK7P58062 85 aa6.4□□□□□ -1.39
CAPRIN1-201ENST00000341394 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
CAPRIN1-201ENST00000341394 Q5VV11 94 aa6.39□□□□□ -1.39
CAPRIN1-201ENST00000341394 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
CAPRIN1-201ENST00000341394 K7ERS5 55 aa6.39□□□□□ -1.39
CAPRIN1-201ENST00000341394 PANO1I0J062 215 aa6.38□□□□□ -1.39
CAPRIN1-201ENST00000341394 CD164Q04900 197 aa6.38□□□□□ -1.39
CAPRIN1-201ENST00000341394 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
CAPRIN1-201ENST00000341394 Q1T7F1 81 aa6.37□□□□□ -1.39
CAPRIN1-201ENST00000341394 KTN1-AS1Q86SY8 53 aa6.37□□□□□ -1.39
CAPRIN1-201ENST00000341394 IGLV5-37A0A075B6J1 123 aa6.36□□□□□ -1.39
CAPRIN1-201ENST00000341394 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
CAPRIN1-201ENST00000341394 H3BPC8 53 aa6.35□□□□□ -1.39
CAPRIN1-201ENST00000341394 LCE6AA0A183 80 aa6.35□□□□□ -1.39
CAPRIN1-201ENST00000341394 C8orf87E5RJ46 101 aa6.35□□□□□ -1.39
CAPRIN1-201ENST00000341394 PLA2G1BP04054 148 aaKnown RBP6.35□□□□□ -1.39
CAPRIN1-201ENST00000341394 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
CAPRIN1-201ENST00000341394 SSBP3-AS1Q7Z2R9 100 aa6.34□□□□□ -1.39
CAPRIN1-201ENST00000341394 A0A087X002 238 aa6.33□□□□□ -1.4
CAPRIN1-201ENST00000341394 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
CAPRIN1-201ENST00000341394 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
CAPRIN1-201ENST00000341394 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
CAPRIN1-201ENST00000341394 CYP4F30PQ9H0H9 118 aa6.33□□□□□ -1.4
CAPRIN1-201ENST00000341394 ZNF861PO60384 105 aa6.33□□□□□ -1.4
CAPRIN1-201ENST00000341394 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
CAPRIN1-201ENST00000341394 LRP1BQ9NZR2 4599 aa6.32□□□□□ -1.4
CAPRIN1-201ENST00000341394 RYR2Q92736 4967 aa6.32□□□□□ -1.4
CAPRIN1-201ENST00000341394 HRES1P13985 223 aa6.31□□□□□ -1.4
CAPRIN1-201ENST00000341394 SPRR1AP35321 89 aa6.31□□□□□ -1.4
CAPRIN1-201ENST00000341394 UQCR11O14957 56 aa6.3□□□□□ -1.4
CAPRIN1-201ENST00000341394 RYR3Q15413 4870 aa6.3□□□□□ -1.4
CAPRIN1-201ENST00000341394 A0A0D9SG42 100 aa6.29□□□□□ -1.4
CAPRIN1-201ENST00000341394 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
CAPRIN1-201ENST00000341394 CDC42SE1Q9NRR8 79 aa6.28□□□□□ -1.4
CAPRIN1-201ENST00000341394 LCA10Q71F78 164 aa6.28□□□□□ -1.4
CAPRIN1-201ENST00000341394 IGLV7-46A0A075B6I9 117 aa6.27□□□□□ -1.41
CAPRIN1-201ENST00000341394 FAM229AH3BQW9 127 aa6.27□□□□□ -1.41
CAPRIN1-201ENST00000341394 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
CAPRIN1-201ENST00000341394 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
CAPRIN1-201ENST00000341394 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
CAPRIN1-201ENST00000341394 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
CAPRIN1-201ENST00000341394 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
CAPRIN1-201ENST00000341394 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
CAPRIN1-201ENST00000341394 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
CAPRIN1-201ENST00000341394 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
CAPRIN1-201ENST00000341394 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.41
CAPRIN1-201ENST00000341394 Q5W150 140 aa6.21□□□□□ -1.42
CAPRIN1-201ENST00000341394 Q75L30 129 aa6.2□□□□□ -1.42
CAPRIN1-201ENST00000341394 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
CAPRIN1-201ENST00000341394 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
CAPRIN1-201ENST00000341394 FAT1Q14517 4588 aa6.18□□□□□ -1.42
CAPRIN1-201ENST00000341394 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
CAPRIN1-201ENST00000341394 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
CAPRIN1-201ENST00000341394 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.43
CAPRIN1-201ENST00000341394 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
CAPRIN1-201ENST00000341394 H3BS24 57 aa6.13□□□□□ -1.43
CAPRIN1-201ENST00000341394 Q6ZSA8 131 aa6.11□□□□□ -1.43
CAPRIN1-201ENST00000341394 J3QL48 77 aa6.1□□□□□ -1.43
CAPRIN1-201ENST00000341394 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
CAPRIN1-201ENST00000341394 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
CAPRIN1-201ENST00000341394 EPPK1P58107 5090 aaKnown RBP6.07□□□□□ -1.44
CAPRIN1-201ENST00000341394 SPRR1BP22528 89 aa6.06□□□□□ -1.44
CAPRIN1-201ENST00000341394 SPATA8Q6RVD6 105 aa6.06□□□□□ -1.44
CAPRIN1-201ENST00000341394 A0A1B0GVY2 172 aa6.05□□□□□ -1.44
CAPRIN1-201ENST00000341394 A0A1B0GU33 70 aa6.03□□□□□ -1.44
CAPRIN1-201ENST00000341394 KIAA1109Q2LD37 5005 aa6.01□□□□□ -1.45
CAPRIN1-201ENST00000341394 HSPG2P98160 4391 aa6.01□□□□□ -1.45
CAPRIN1-201ENST00000341394 A6NN06 94 aa6.01□□□□□ -1.45
CAPRIN1-201ENST00000341394 LINC00483Q53H64 154 aa6□□□□□ -1.45
CAPRIN1-201ENST00000341394 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
CAPRIN1-201ENST00000341394 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
CAPRIN1-201ENST00000341394 Q5VSD8 79 aa5.93□□□□□ -1.46
CAPRIN1-201ENST00000341394 RYR1P21817 5038 aa5.93□□□□□ -1.46
CAPRIN1-201ENST00000341394 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
CAPRIN1-201ENST00000341394 MYCBP2O75592 4640 aa5.92□□□□□ -1.46
CAPRIN1-201ENST00000341394 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
CAPRIN1-201ENST00000341394 KRTAP13-2Q52LG2 175 aa5.91□□□□□ -1.46
CAPRIN1-201ENST00000341394 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
CAPRIN1-201ENST00000341394 KRTAP10-4P60372 401 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms