RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 SPINK6Q6UWN8 80 aa9.29□□□□□ -0.92
CCDC144A-202ENST00000340621 NOTCH2NLQ7Z3S9 236 aa9.29□□□□□ -0.92
CCDC144A-202ENST00000340621 TRAV22A0A0B4J277 110 aa9.26□□□□□ -0.93
CCDC144A-202ENST00000340621 KRTAP1-4P0C5Y4 121 aa9.25□□□□□ -0.93
CCDC144A-202ENST00000340621 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
CCDC144A-202ENST00000340621 H3BPC8 53 aa9.24□□□□□ -0.93
CCDC144A-202ENST00000340621 C1orf64Q8NEQ6 169 aa9.24□□□□□ -0.93
CCDC144A-202ENST00000340621 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
CCDC144A-202ENST00000340621 PRR4Q16378 134 aa9.22□□□□□ -0.93
CCDC144A-202ENST00000340621 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
CCDC144A-202ENST00000340621 NDUFS5O43920 106 aa9.21□□□□□ -0.93
CCDC144A-202ENST00000340621 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.94
CCDC144A-202ENST00000340621 FP248Q71RG6 208 aaPredicted RBP9.2□□□□□ -0.94
CCDC144A-202ENST00000340621 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
CCDC144A-202ENST00000340621 LINC00336Q6ZUF6 198 aa9.18□□□□□ -0.94
CCDC144A-202ENST00000340621 CYP4F30PQ9H0H9 118 aa9.16□□□□□ -0.94
CCDC144A-202ENST00000340621 C1orf195Q5TG92 126 aa9.16□□□□□ -0.94
CCDC144A-202ENST00000340621 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
CCDC144A-202ENST00000340621 RYR2Q92736 4967 aa9.13□□□□□ -0.95
CCDC144A-202ENST00000340621 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
CCDC144A-202ENST00000340621 SPANXA2-OT1Q8N9U9 137 aa9.12□□□□□ -0.95
CCDC144A-202ENST00000340621 TYMSOSQ8TAI1 123 aa9.11□□□□□ -0.95
CCDC144A-202ENST00000340621 C8orf87E5RJ46 101 aa9.1□□□□□ -0.95
CCDC144A-202ENST00000340621 KMT2CQ8NEZ4 4911 aaKnown RBP9.1□□□□□ -0.95
CCDC144A-202ENST00000340621 Q5W150 140 aa9.09□□□□□ -0.95
CCDC144A-202ENST00000340621 LINC00313P59037 77 aa9.09□□□□□ -0.95
CCDC144A-202ENST00000340621 PCOTHQ58A44 107 aa9.09□□□□□ -0.95
CCDC144A-202ENST00000340621 FAT1Q14517 4588 aa9.08□□□□□ -0.96
CCDC144A-202ENST00000340621 APOBP04114 4563 aaKnown RBP9.08□□□□□ -0.96
CCDC144A-202ENST00000340621 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
CCDC144A-202ENST00000340621 MPLKIPQ8TAP9 179 aa9.07□□□□□ -0.96
CCDC144A-202ENST00000340621 LIMD2Q9BT23 127 aa9.07□□□□□ -0.96
CCDC144A-202ENST00000340621 PRR26Q8N8Z3 221 aa9.05□□□□□ -0.96
CCDC144A-202ENST00000340621 PRO0628Q9UI54 55 aa9.05□□□□□ -0.96
CCDC144A-202ENST00000340621 IGLV7-46A0A075B6I9 117 aa9.05□□□□□ -0.96
CCDC144A-202ENST00000340621 KRTAP13-3Q3SY46 172 aa9.04□□□□□ -0.96
CCDC144A-202ENST00000340621 SPINK1P00995 79 aa9.03□□□□□ -0.96
CCDC144A-202ENST00000340621 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
CCDC144A-202ENST00000340621 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
CCDC144A-202ENST00000340621 KRTAP16-1A8MUX0 517 aa8.99□□□□□ -0.97
CCDC144A-202ENST00000340621 Q1T7F1 81 aa8.99□□□□□ -0.97
CCDC144A-202ENST00000340621 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
CCDC144A-202ENST00000340621 LINC00304Q8N9R0 145 aa8.97□□□□□ -0.97
CCDC144A-202ENST00000340621 RETNLBQ9BQ08 111 aa8.96□□□□□ -0.98
CCDC144A-202ENST00000340621 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
CCDC144A-202ENST00000340621 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
CCDC144A-202ENST00000340621 COA5Q86WW8 74 aa8.92□□□□□ -0.98
CCDC144A-202ENST00000340621 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
CCDC144A-202ENST00000340621 V9GYY9 64 aa8.89□□□□□ -0.99
CCDC144A-202ENST00000340621 BRK1Q8WUW1 75 aa8.88□□□□□ -0.99
CCDC144A-202ENST00000340621 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
CCDC144A-202ENST00000340621 HRES1P13985 223 aa8.85□□□□□ -0.99
CCDC144A-202ENST00000340621 RYR3Q15413 4870 aa8.85□□□□□ -0.99
CCDC144A-202ENST00000340621 PSPHP1O15172 72 aa8.84□□□□□ -0.99
CCDC144A-202ENST00000340621 IGKV2-30P06310 120 aa8.84□□□□□ -0.99
CCDC144A-202ENST00000340621 A8MUN3 132 aa8.78□□□□□ -1
CCDC144A-202ENST00000340621 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
CCDC144A-202ENST00000340621 HSPG2P98160 4391 aa8.76□□□□□ -1.01
CCDC144A-202ENST00000340621 C9orf92A6NGG3 77 aa8.74□□□□□ -1.01
CCDC144A-202ENST00000340621 ACYP2P14621 99 aa8.74□□□□□ -1.01
CCDC144A-202ENST00000340621 DMAC1Q96GE9 116 aa8.74□□□□□ -1.01
CCDC144A-202ENST00000340621 LRP1Q07954 4544 aaKnown RBP8.73□□□□□ -1.01
CCDC144A-202ENST00000340621 Q5VV11 94 aa8.72□□□□□ -1.01
CCDC144A-202ENST00000340621 PRR15LQ9BU68 103 aa8.7□□□□□ -1.02
CCDC144A-202ENST00000340621 RYR1P21817 5038 aa8.69□□□□□ -1.02
CCDC144A-202ENST00000340621 Q5VSD8 79 aa8.69□□□□□ -1.02
CCDC144A-202ENST00000340621 Q8N1X5 172 aa8.69□□□□□ -1.02
CCDC144A-202ENST00000340621 TNXBP22105 4242 aa8.68□□□□□ -1.02
CCDC144A-202ENST00000340621 C20orf166-AS1Q96NR2 134 aa8.66□□□□□ -1.02
CCDC144A-202ENST00000340621 A8MUU9 505 aa8.66□□□□□ -1.02
CCDC144A-202ENST00000340621 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
CCDC144A-202ENST00000340621 SEC61GP60059 68 aa8.65□□□□□ -1.03
CCDC144A-202ENST00000340621 KRTAP10-8P60410 259 aa8.65□□□□□ -1.03
CCDC144A-202ENST00000340621 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
CCDC144A-202ENST00000340621 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
CCDC144A-202ENST00000340621 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
CCDC144A-202ENST00000340621 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
CCDC144A-202ENST00000340621 C7orf65Q6ZTY9 151 aa8.63□□□□□ -1.03
CCDC144A-202ENST00000340621 Q75L30 129 aa8.62□□□□□ -1.03
CCDC144A-202ENST00000340621 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
CCDC144A-202ENST00000340621 A8MU10 97 aa8.55□□□□□ -1.04
CCDC144A-202ENST00000340621 PMAIP1Q13794 54 aa8.54□□□□□ -1.04
CCDC144A-202ENST00000340621 EPPK1P58107 5090 aaKnown RBP8.52□□□□□ -1.04
CCDC144A-202ENST00000340621 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
CCDC144A-202ENST00000340621 A6NED7 52 aa8.51□□□□□ -1.05
CCDC144A-202ENST00000340621 SPINK7P58062 85 aa8.49□□□□□ -1.05
CCDC144A-202ENST00000340621 LCA10Q71F78 164 aa8.48□□□□□ -1.05
CCDC144A-202ENST00000340621 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
CCDC144A-202ENST00000340621 ATP11AUNQ6ZP68 121 aa8.45□□□□□ -1.06
CCDC144A-202ENST00000340621 CDC42SE1Q9NRR8 79 aa8.45□□□□□ -1.06
CCDC144A-202ENST00000340621 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
CCDC144A-202ENST00000340621 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
CCDC144A-202ENST00000340621 A0A1B0GU69 56 aa8.41□□□□□ -1.06
CCDC144A-202ENST00000340621 XP32Q5T750 250 aa8.36□□□□□ -1.07
CCDC144A-202ENST00000340621 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
CCDC144A-202ENST00000340621 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
CCDC144A-202ENST00000340621 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
CCDC144A-202ENST00000340621 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
CCDC144A-202ENST00000340621 A6NN06 94 aa8.26□□□□□ -1.09
CCDC144A-202ENST00000340621 KRTAP4-5Q9BYR2 181 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms