RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
SRFBP1-201ENST00000339397 HSPG2P98160 4391 aa4.3□□□□□ -1.72
SRFBP1-201ENST00000339397 KRTAP29-1A8MX34 341 aaPredicted RBP4.3□□□□□ -1.72
SRFBP1-201ENST00000339397 V9GYY9 64 aa4.3□□□□□ -1.72
SRFBP1-201ENST00000339397 LRP1Q07954 4544 aaKnown RBP4.29□□□□□ -1.72
SRFBP1-201ENST00000339397 H7BZZ5 65 aa4.29□□□□□ -1.72
SRFBP1-201ENST00000339397 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
SRFBP1-201ENST00000339397 IGHV6-1A0A0B4J1U7 121 aa4.29□□□□□ -1.72
SRFBP1-201ENST00000339397 LCE2BO14633 110 aa4.28□□□□□ -1.72
SRFBP1-201ENST00000339397 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
SRFBP1-201ENST00000339397 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
SRFBP1-201ENST00000339397 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
SRFBP1-201ENST00000339397 SSBP3-AS1Q7Z2R9 100 aa4.28□□□□□ -1.72
SRFBP1-201ENST00000339397 TMEM254Q8TBM7 123 aa4.28□□□□□ -1.72
SRFBP1-201ENST00000339397 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.73
SRFBP1-201ENST00000339397 Q5XG85 94 aa4.28□□□□□ -1.73
SRFBP1-201ENST00000339397 PKHD1L1Q86WI1 4243 aa4.27□□□□□ -1.73
SRFBP1-201ENST00000339397 NDUFC1O43677 76 aa4.27□□□□□ -1.73
SRFBP1-201ENST00000339397 C4orf26Q17RF5 130 aa4.27□□□□□ -1.73
SRFBP1-201ENST00000339397 Q75L30 129 aa4.26□□□□□ -1.73
SRFBP1-201ENST00000339397 FLG2Q5D862 2391 aaPredicted RBP4.25□□□□□ -1.73
SRFBP1-201ENST00000339397 NDUFB1O75438 58 aa4.25□□□□□ -1.73
SRFBP1-201ENST00000339397 A0A0U1RQV1 116 aa4.25□□□□□ -1.73
SRFBP1-201ENST00000339397 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
SRFBP1-201ENST00000339397 FAM229BQ4G0N7 80 aa4.25□□□□□ -1.73
SRFBP1-201ENST00000339397 TYMSOSQ8TAI1 123 aa4.25□□□□□ -1.73
SRFBP1-201ENST00000339397 A0A1B0GVX0 72 aa4.24□□□□□ -1.73
SRFBP1-201ENST00000339397 C8orf17Q9NRJ1 99 aa4.24□□□□□ -1.73
SRFBP1-201ENST00000339397 KIAA1109Q2LD37 5005 aa4.24□□□□□ -1.73
SRFBP1-201ENST00000339397 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
SRFBP1-201ENST00000339397 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
SRFBP1-201ENST00000339397 CD164Q04900 197 aa4.24□□□□□ -1.73
SRFBP1-201ENST00000339397 C1orf195Q5TG92 126 aa4.24□□□□□ -1.73
SRFBP1-201ENST00000339397 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
SRFBP1-201ENST00000339397 SMIM26A0A096LP01 95 aa4.23□□□□□ -1.73
SRFBP1-201ENST00000339397 CDK2AP2O75956 126 aa4.22□□□□□ -1.73
SRFBP1-201ENST00000339397 ASB16-AS1Q495Z4 193 aa4.22□□□□□ -1.73
SRFBP1-201ENST00000339397 NDUFS5O43920 106 aa4.21□□□□□ -1.74
SRFBP1-201ENST00000339397 LINC00208Q96KT6 92 aa4.21□□□□□ -1.74
SRFBP1-201ENST00000339397 TNXBP22105 4242 aa4.2□□□□□ -1.74
SRFBP1-201ENST00000339397 ZCCHC13Q8WW36 166 aaKnown RBP4.2□□□□□ -1.74
SRFBP1-201ENST00000339397 DMBT1Q9UGM3 2413 aaPredicted RBP4.2□□□□□ -1.74
SRFBP1-201ENST00000339397 RYR1P21817 5038 aa4.19□□□□□ -1.74
SRFBP1-201ENST00000339397 H0Y9P7 68 aa4.19□□□□□ -1.74
SRFBP1-201ENST00000339397 PRR4Q16378 134 aa4.19□□□□□ -1.74
SRFBP1-201ENST00000339397 Q5W150 140 aa4.18□□□□□ -1.74
SRFBP1-201ENST00000339397 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
SRFBP1-201ENST00000339397 FP248Q71RG6 208 aaPredicted RBP4.18□□□□□ -1.74
SRFBP1-201ENST00000339397 LINC00304Q8N9R0 145 aa4.18□□□□□ -1.74
SRFBP1-201ENST00000339397 HERC2O95714 4834 aa4.17□□□□□ -1.74
SRFBP1-201ENST00000339397 RETNLBQ9BQ08 111 aa4.17□□□□□ -1.74
SRFBP1-201ENST00000339397 SPINK1P00995 79 aa4.16□□□□□ -1.74
SRFBP1-201ENST00000339397 TRAV22A0A0B4J277 110 aa4.16□□□□□ -1.74
SRFBP1-201ENST00000339397 MP68P56378 58 aa4.16□□□□□ -1.74
SRFBP1-201ENST00000339397 LINC00313P59037 77 aa4.16□□□□□ -1.74
SRFBP1-201ENST00000339397 Q5VSD8 79 aa4.16□□□□□ -1.74
SRFBP1-201ENST00000339397 C1orf64Q8NEQ6 169 aa4.16□□□□□ -1.74
SRFBP1-201ENST00000339397 PRO0628Q9UI54 55 aa4.15□□□□□ -1.74
SRFBP1-201ENST00000339397 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
SRFBP1-201ENST00000339397 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
SRFBP1-201ENST00000339397 PCOTHQ58A44 107 aa4.14□□□□□ -1.75
SRFBP1-201ENST00000339397 FAT3Q8TDW7 4589 aa4.13□□□□□ -1.75
SRFBP1-201ENST00000339397 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
SRFBP1-201ENST00000339397 Q8N1X5 172 aa4.13□□□□□ -1.75
SRFBP1-201ENST00000339397 TP53AIP1Q9HCN2 124 aa4.12□□□□□ -1.75
SRFBP1-201ENST00000339397 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
SRFBP1-201ENST00000339397 C9orf92A6NGG3 77 aa4.11□□□□□ -1.75
SRFBP1-201ENST00000339397 MPLKIPQ8TAP9 179 aa4.11□□□□□ -1.75
SRFBP1-201ENST00000339397 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
SRFBP1-201ENST00000339397 Q8N9P0 234 aaPredicted RBP4.11□□□□□ -1.75
SRFBP1-201ENST00000339397 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
SRFBP1-201ENST00000339397 SPAG11AQ6PDA7 123 aa4.1□□□□□ -1.75
SRFBP1-201ENST00000339397 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.75
SRFBP1-201ENST00000339397 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
SRFBP1-201ENST00000339397 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
SRFBP1-201ENST00000339397 H3BPC8 53 aa4.08□□□□□ -1.76
SRFBP1-201ENST00000339397 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
SRFBP1-201ENST00000339397 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
SRFBP1-201ENST00000339397 Q1T7F1 81 aa4.05□□□□□ -1.76
SRFBP1-201ENST00000339397 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
SRFBP1-201ENST00000339397 MT1HL1P0DM35 61 aa4.04□□□□□ -1.76
SRFBP1-201ENST00000339397 IGLV7-46A0A075B6I9 117 aa4.04□□□□□ -1.76
SRFBP1-201ENST00000339397 IGKV2D-30A0A075B6S6 120 aa4.03□□□□□ -1.76
SRFBP1-201ENST00000339397 IGKV2-30P06310 120 aa4.03□□□□□ -1.76
SRFBP1-201ENST00000339397 SPANXA2-OT1Q8N9U9 137 aa4.03□□□□□ -1.76
SRFBP1-201ENST00000339397 LOC101927531A0A1B0GV80 90 aa4.02□□□□□ -1.77
SRFBP1-201ENST00000339397 LPAP08519 4548 aa4.02□□□□□ -1.77
SRFBP1-201ENST00000339397 HRES1P13985 223 aa4.01□□□□□ -1.77
SRFBP1-201ENST00000339397 PRAC1Q96KF2 57 aa4□□□□□ -1.77
SRFBP1-201ENST00000339397 PSPHP1O15172 72 aa3.99□□□□□ -1.77
SRFBP1-201ENST00000339397 LRP2P98164 4655 aa3.99□□□□□ -1.77
SRFBP1-201ENST00000339397 COA5Q86WW8 74 aa3.98□□□□□ -1.77
SRFBP1-201ENST00000339397 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
SRFBP1-201ENST00000339397 A8MUU9 505 aa3.98□□□□□ -1.77
SRFBP1-201ENST00000339397 A8MUN3 132 aa3.95□□□□□ -1.78
SRFBP1-201ENST00000339397 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
SRFBP1-201ENST00000339397 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
SRFBP1-201ENST00000339397 Q5VV11 94 aa3.93□□□□□ -1.78
SRFBP1-201ENST00000339397 SPINK7P58062 85 aa3.92□□□□□ -1.78
SRFBP1-201ENST00000339397 XP32Q5T750 250 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms