RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 LRP1Q07954 4544 aaKnown RBP13.64□□□□□ -0.23
TSEN54-201ENST00000333213 SSBP3-AS1Q7Z2R9 100 aa13.61□□□□□ -0.23
TSEN54-201ENST00000333213 PRR26Q8N8Z3 221 aa13.61□□□□□ -0.23
TSEN54-201ENST00000333213 FP248Q71RG6 208 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-201ENST00000333213 K7EQZ3 153 aa13.6□□□□□ -0.23
TSEN54-201ENST00000333213 HCG22E2RYF7 251 aa13.58□□□□□ -0.24
TSEN54-201ENST00000333213 A0A087WSZ3 146 aa13.57□□□□□ -0.24
TSEN54-201ENST00000333213 ZCCHC13Q8WW36 166 aaKnown RBP13.57□□□□□ -0.24
TSEN54-201ENST00000333213 FAT3Q8TDW7 4589 aa13.54□□□□□ -0.24
TSEN54-201ENST00000333213 TYMSOSQ8TAI1 123 aa13.54□□□□□ -0.24
TSEN54-201ENST00000333213 MYCBP2O75592 4640 aa13.53□□□□□ -0.24
TSEN54-201ENST00000333213 KRTAP4-5Q9BYR2 181 aa13.52□□□□□ -0.25
TSEN54-201ENST00000333213 TNXBP22105 4242 aa13.51□□□□□ -0.25
TSEN54-201ENST00000333213 HERC2O95714 4834 aa13.48□□□□□ -0.25
TSEN54-201ENST00000333213 CD164Q04900 197 aa13.47□□□□□ -0.25
TSEN54-201ENST00000333213 FLG2Q5D862 2391 aaPredicted RBP13.44□□□□□ -0.26
TSEN54-201ENST00000333213 NDUFB1O75438 58 aa13.43□□□□□ -0.26
TSEN54-201ENST00000333213 CYP4F30PQ9H0H9 118 aa13.41□□□□□ -0.26
TSEN54-201ENST00000333213 PRO0628Q9UI54 55 aa13.41□□□□□ -0.26
TSEN54-201ENST00000333213 hDV103S1A0JD37 113 aa13.41□□□□□ -0.26
TSEN54-201ENST00000333213 KRTAP29-1A8MX34 341 aaPredicted RBP13.41□□□□□ -0.26
TSEN54-201ENST00000333213 DEFB116Q30KQ4 102 aa13.4□□□□□ -0.26
TSEN54-201ENST00000333213 ABCA13Q86UQ4 5058 aa13.39□□□□□ -0.27
TSEN54-201ENST00000333213 H3BPC8 53 aa13.38□□□□□ -0.27
TSEN54-201ENST00000333213 LINC00472Q9H8W2 130 aa13.38□□□□□ -0.27
TSEN54-201ENST00000333213 MP68P56378 58 aa13.37□□□□□ -0.27
TSEN54-201ENST00000333213 KRTAP10-8P60410 259 aa13.37□□□□□ -0.27
TSEN54-201ENST00000333213 LINC00304Q8N9R0 145 aa13.37□□□□□ -0.27
TSEN54-201ENST00000333213 Q96NJ1 140 aa13.37□□□□□ -0.27
TSEN54-201ENST00000333213 PRR15Q8IV56 129 aa13.36□□□□□ -0.27
TSEN54-201ENST00000333213 A8MWP4 228 aa13.35□□□□□ -0.27
TSEN54-201ENST00000333213 C4orf48Q5BLP8 95 aa13.33□□□□□ -0.28
TSEN54-201ENST00000333213 WFDC13Q8IUB5 93 aa13.33□□□□□ -0.28
TSEN54-201ENST00000333213 SPINK1P00995 79 aa13.33□□□□□ -0.28
TSEN54-201ENST00000333213 C1orf64Q8NEQ6 169 aa13.31□□□□□ -0.28
TSEN54-201ENST00000333213 CASC2Q6XLA1 102 aa13.3□□□□□ -0.28
TSEN54-201ENST00000333213 TRAV22A0A0B4J277 110 aa13.29□□□□□ -0.28
TSEN54-201ENST00000333213 SPAG11AQ6PDA7 123 aa13.29□□□□□ -0.28
TSEN54-201ENST00000333213 MT1HL1P0DM35 61 aa13.28□□□□□ -0.28
TSEN54-201ENST00000333213 ASB16-AS1Q495Z4 193 aa13.27□□□□□ -0.28
TSEN54-201ENST00000333213 Q1T7F1 81 aa13.26□□□□□ -0.29
TSEN54-201ENST00000333213 SPANXA2-OT1Q8N9U9 137 aa13.26□□□□□ -0.29
TSEN54-201ENST00000333213 MPLKIPQ8TAP9 179 aa13.26□□□□□ -0.29
TSEN54-201ENST00000333213 RPS29P62273 56 aaKnown RBP13.24□□□□□ -0.29
TSEN54-201ENST00000333213 LIMD2Q9BT23 127 aa13.23□□□□□ -0.29
TSEN54-201ENST00000333213 C1orf195Q5TG92 126 aa13.22□□□□□ -0.29
TSEN54-201ENST00000333213 H0Y9P7 68 aa13.21□□□□□ -0.29
TSEN54-201ENST00000333213 LINC00208Q96KT6 92 aa13.21□□□□□ -0.3
TSEN54-201ENST00000333213 MMP24-AS1A0A0U1RRL7 71 aa13.17□□□□□ -0.3
TSEN54-201ENST00000333213 V9GYY9 64 aa13.13□□□□□ -0.31
TSEN54-201ENST00000333213 BRK1Q8WUW1 75 aa13.13□□□□□ -0.31
TSEN54-201ENST00000333213 DMBT1Q9UGM3 2413 aaPredicted RBP13.12□□□□□ -0.31
TSEN54-201ENST00000333213 TP53AIP1Q9HCN2 124 aa13.11□□□□□ -0.31
TSEN54-201ENST00000333213 RETNLBQ9BQ08 111 aa13.07□□□□□ -0.32
TSEN54-201ENST00000333213 PRR4Q16378 134 aa13.06□□□□□ -0.32
TSEN54-201ENST00000333213 A0A1B0GVX0 72 aa13.05□□□□□ -0.32
TSEN54-201ENST00000333213 NOTCH2NLQ7Z3S9 236 aa13.04□□□□□ -0.32
TSEN54-201ENST00000333213 PCLOQ9Y6V0 5065 aa13.04□□□□□ -0.32
TSEN54-201ENST00000333213 IGHV6-1A0A0B4J1U7 121 aa13.03□□□□□ -0.32
TSEN54-201ENST00000333213 C8orf17Q9NRJ1 99 aa13.01□□□□□ -0.33
TSEN54-201ENST00000333213 IGLV7-46A0A075B6I9 117 aa13□□□□□ -0.33
TSEN54-201ENST00000333213 PSPHP1O15172 72 aa12.89□□□□□ -0.35
TSEN54-201ENST00000333213 Q8N9P0 234 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-201ENST00000333213 MRPL34Q9BQ48 92 aaKnown RBP12.89□□□□□ -0.35
TSEN54-201ENST00000333213 J3QL48 77 aa12.88□□□□□ -0.35
TSEN54-201ENST00000333213 LINC00313P59037 77 aa12.88□□□□□ -0.35
TSEN54-201ENST00000333213 C8orf87E5RJ46 101 aa12.86□□□□□ -0.35
TSEN54-201ENST00000333213 COA5Q86WW8 74 aa12.85□□□□□ -0.35
TSEN54-201ENST00000333213 A8MUN3 132 aa12.84□□□□□ -0.35
TSEN54-201ENST00000333213 KRTAP16-1A8MUX0 517 aa12.83□□□□□ -0.36
TSEN54-201ENST00000333213 Q5VV11 94 aa12.83□□□□□ -0.36
TSEN54-201ENST00000333213 C9orf92A6NGG3 77 aa12.79□□□□□ -0.36
TSEN54-201ENST00000333213 NDUFS5O43920 106 aa12.78□□□□□ -0.36
TSEN54-201ENST00000333213 LOC101927531A0A1B0GV80 90 aa12.77□□□□□ -0.37
TSEN54-201ENST00000333213 PCOTHQ58A44 107 aa12.76□□□□□ -0.37
TSEN54-201ENST00000333213 Q75L30 129 aa12.72□□□□□ -0.37
TSEN54-201ENST00000333213 HERC1Q15751 4861 aa12.72□□□□□ -0.37
TSEN54-201ENST00000333213 LPAP08519 4548 aa12.7□□□□□ -0.38
TSEN54-201ENST00000333213 PRR15LQ9BU68 103 aa12.7□□□□□ -0.38
TSEN54-201ENST00000333213 KRTAP13-3Q3SY46 172 aa12.68□□□□□ -0.38
TSEN54-201ENST00000333213 CHKB-CPT1BH3BT56 60 aa12.67□□□□□ -0.38
TSEN54-201ENST00000333213 LINC01558Q9Y6Z2 57 aa12.67□□□□□ -0.38
TSEN54-201ENST00000333213 HRES1P13985 223 aa12.62□□□□□ -0.39
TSEN54-201ENST00000333213 C20orf166-AS1Q96NR2 134 aa12.59□□□□□ -0.39
TSEN54-201ENST00000333213 A8MUU9 505 aa12.57□□□□□ -0.4
TSEN54-201ENST00000333213 Q5W150 140 aa12.57□□□□□ -0.4
TSEN54-201ENST00000333213 TPRXLQ17RH7 258 aa12.56□□□□□ -0.4
TSEN54-201ENST00000333213 LRP2P98164 4655 aa12.56□□□□□ -0.4
TSEN54-201ENST00000333213 XP32Q5T750 250 aa12.55□□□□□ -0.4
TSEN54-201ENST00000333213 PMAIP1Q13794 54 aa12.54□□□□□ -0.4
TSEN54-201ENST00000333213 A6NED7 52 aa12.5□□□□□ -0.41
TSEN54-201ENST00000333213 ATP11AUNQ6ZP68 121 aa12.5□□□□□ -0.41
TSEN54-201ENST00000333213 CDC42SE1Q9NRR8 79 aa12.49□□□□□ -0.41
TSEN54-201ENST00000333213 ACYP2P14621 99 aa12.48□□□□□ -0.41
TSEN54-201ENST00000333213 HMCN2Q8NDA2 5059 aa12.48□□□□□ -0.41
TSEN54-201ENST00000333213 LCA10Q71F78 164 aa12.47□□□□□ -0.41
TSEN54-201ENST00000333213 A8MU10 97 aa12.45□□□□□ -0.42
TSEN54-201ENST00000333213 DMAC1Q96GE9 116 aa12.43□□□□□ -0.42
TSEN54-201ENST00000333213 RPL37P61927 97 aaKnown RBP12.43□□□□□ -0.42
TSEN54-201ENST00000333213 IGKV2-30P06310 120 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms