RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 C8orf87E5RJ46 101 aa5.71□□□□□ -1.5
C11orf54-201ENST00000331239 ATP5EP56381 51 aaPredicted RBP5.71□□□□□ -1.5
C11orf54-201ENST00000331239 DSCR10P59022 87 aa5.71□□□□□ -1.5
C11orf54-201ENST00000331239 IGFL1Q6UW32 110 aa5.71□□□□□ -1.5
C11orf54-201ENST00000331239 VPS13BQ7Z7G8 4022 aa5.7□□□□□ -1.5
C11orf54-201ENST00000331239 IGLV8-61A0A075B6I0 122 aa5.7□□□□□ -1.5
C11orf54-201ENST00000331239 K7EQZ3 153 aa5.69□□□□□ -1.5
C11orf54-201ENST00000331239 A0A0G2JQZ4 141 aa5.68□□□□□ -1.5
C11orf54-201ENST00000331239 HSPG2P98160 4391 aa5.67□□□□□ -1.5
C11orf54-201ENST00000331239 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
C11orf54-201ENST00000331239 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
C11orf54-201ENST00000331239 A0A087WSZ3 146 aa5.66□□□□□ -1.5
C11orf54-201ENST00000331239 SSBP3-AS1Q7Z2R9 100 aa5.66□□□□□ -1.5
C11orf54-201ENST00000331239 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
C11orf54-201ENST00000331239 HCG22E2RYF7 251 aa5.65□□□□□ -1.5
C11orf54-201ENST00000331239 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
C11orf54-201ENST00000331239 DEFB116Q30KQ4 102 aa5.63□□□□□ -1.51
C11orf54-201ENST00000331239 PCLOQ9Y6V0 5065 aa5.61□□□□□ -1.51
C11orf54-201ENST00000331239 FAT1Q14517 4588 aa5.61□□□□□ -1.51
C11orf54-201ENST00000331239 SPAG11AQ6PDA7 123 aa5.6□□□□□ -1.51
C11orf54-201ENST00000331239 ZCCHC13Q8WW36 166 aaKnown RBP5.6□□□□□ -1.51
C11orf54-201ENST00000331239 WFDC13Q8IUB5 93 aa5.59□□□□□ -1.51
C11orf54-201ENST00000331239 HERC2O95714 4834 aa5.59□□□□□ -1.51
C11orf54-201ENST00000331239 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
C11orf54-201ENST00000331239 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
C11orf54-201ENST00000331239 KRTAP29-1A8MX34 341 aaPredicted RBP5.58□□□□□ -1.52
C11orf54-201ENST00000331239 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
C11orf54-201ENST00000331239 NDUFS5O43920 106 aa5.57□□□□□ -1.52
C11orf54-201ENST00000331239 KRTAP13-2Q52LG2 175 aa5.57□□□□□ -1.52
C11orf54-201ENST00000331239 TYMSOSQ8TAI1 123 aa5.57□□□□□ -1.52
C11orf54-201ENST00000331239 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
C11orf54-201ENST00000331239 LINC00472Q9H8W2 130 aa5.57□□□□□ -1.52
C11orf54-201ENST00000331239 A8MWP4 228 aa5.56□□□□□ -1.52
C11orf54-201ENST00000331239 LCE2BO14633 110 aa5.56□□□□□ -1.52
C11orf54-201ENST00000331239 A0A087X002 238 aa5.56□□□□□ -1.52
C11orf54-201ENST00000331239 MOBPQ13875 183 aa5.55□□□□□ -1.52
C11orf54-201ENST00000331239 CASC2Q6XLA1 102 aa5.55□□□□□ -1.52
C11orf54-201ENST00000331239 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
C11orf54-201ENST00000331239 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
C11orf54-201ENST00000331239 MP68P56378 58 aa5.55□□□□□ -1.52
C11orf54-201ENST00000331239 SPINK1P00995 79 aa5.54□□□□□ -1.52
C11orf54-201ENST00000331239 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
C11orf54-201ENST00000331239 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
C11orf54-201ENST00000331239 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
C11orf54-201ENST00000331239 A8MUN3 132 aa5.53□□□□□ -1.52
C11orf54-201ENST00000331239 NDUFB1O75438 58 aa5.53□□□□□ -1.52
C11orf54-201ENST00000331239 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
C11orf54-201ENST00000331239 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
C11orf54-201ENST00000331239 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
C11orf54-201ENST00000331239 LIMD2Q9BT23 127 aa5.52□□□□□ -1.53
C11orf54-201ENST00000331239 TRAV22A0A0B4J277 110 aa5.51□□□□□ -1.53
C11orf54-201ENST00000331239 KRTAP4-5Q9BYR2 181 aa5.51□□□□□ -1.53
C11orf54-201ENST00000331239 H0Y9P7 68 aa5.5□□□□□ -1.53
C11orf54-201ENST00000331239 LCA10Q71F78 164 aa5.5□□□□□ -1.53
C11orf54-201ENST00000331239 LINC00208Q96KT6 92 aa5.5□□□□□ -1.53
C11orf54-201ENST00000331239 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
C11orf54-201ENST00000331239 H3BPC8 53 aa5.5□□□□□ -1.53
C11orf54-201ENST00000331239 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
C11orf54-201ENST00000331239 Q1T7F1 81 aa5.49□□□□□ -1.53
C11orf54-201ENST00000331239 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
C11orf54-201ENST00000331239 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
C11orf54-201ENST00000331239 Q96NJ1 140 aa5.48□□□□□ -1.53
C11orf54-201ENST00000331239 PRR4Q16378 134 aa5.48□□□□□ -1.53
C11orf54-201ENST00000331239 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
C11orf54-201ENST00000331239 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
C11orf54-201ENST00000331239 MYCBP2O75592 4640 aa5.46□□□□□ -1.54
C11orf54-201ENST00000331239 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.54
C11orf54-201ENST00000331239 A6NN06 94 aa5.45□□□□□ -1.54
C11orf54-201ENST00000331239 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
C11orf54-201ENST00000331239 C7orf65Q6ZTY9 151 aa5.44□□□□□ -1.54
C11orf54-201ENST00000331239 C8orf17Q9NRJ1 99 aa5.44□□□□□ -1.54
C11orf54-201ENST00000331239 A0A1B0GVX0 72 aa5.43□□□□□ -1.54
C11orf54-201ENST00000331239 LINC00313P59037 77 aa5.43□□□□□ -1.54
C11orf54-201ENST00000331239 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
C11orf54-201ENST00000331239 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
C11orf54-201ENST00000331239 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
C11orf54-201ENST00000331239 TNXBP22105 4242 aa5.41□□□□□ -1.54
C11orf54-201ENST00000331239 A8MU10 97 aa5.4□□□□□ -1.54
C11orf54-201ENST00000331239 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
C11orf54-201ENST00000331239 HERC1Q15751 4861 aa5.39□□□□□ -1.55
C11orf54-201ENST00000331239 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
C11orf54-201ENST00000331239 MRPL34Q9BQ48 92 aaKnown RBP5.38□□□□□ -1.55
C11orf54-201ENST00000331239 LINC01554Q52M75 96 aa5.37□□□□□ -1.55
C11orf54-201ENST00000331239 IGLV7-46A0A075B6I9 117 aa5.36□□□□□ -1.55
C11orf54-201ENST00000331239 PSPHP1O15172 72 aa5.36□□□□□ -1.55
C11orf54-201ENST00000331239 PCOTHQ58A44 107 aa5.35□□□□□ -1.55
C11orf54-201ENST00000331239 NOTCH2NLQ7Z3S9 236 aa5.35□□□□□ -1.55
C11orf54-201ENST00000331239 COA5Q86WW8 74 aa5.33□□□□□ -1.56
C11orf54-201ENST00000331239 Q5VV11 94 aa5.32□□□□□ -1.56
C11orf54-201ENST00000331239 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
C11orf54-201ENST00000331239 Q8N9P0 234 aaPredicted RBP5.3□□□□□ -1.56
C11orf54-201ENST00000331239 LOC101927531A0A1B0GV80 90 aa5.29□□□□□ -1.56
C11orf54-201ENST00000331239 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
C11orf54-201ENST00000331239 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
C11orf54-201ENST00000331239 Q5W150 140 aa5.26□□□□□ -1.57
C11orf54-201ENST00000331239 PRR15LQ9BU68 103 aa5.26□□□□□ -1.57
C11orf54-201ENST00000331239 CHKB-CPT1BH3BT56 60 aa5.24□□□□□ -1.57
C11orf54-201ENST00000331239 HRES1P13985 223 aa5.24□□□□□ -1.57
C11orf54-201ENST00000331239 RETNLBQ9BQ08 111 aa5.23□□□□□ -1.57
C11orf54-201ENST00000331239 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms