RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
VMA21-201ENST00000330374 SPINK7P58062 85 aa4.78□□□□□ -1.64
VMA21-201ENST00000330374 C8orf17Q9NRJ1 99 aa4.78□□□□□ -1.64
VMA21-201ENST00000330374 HUWE1Q7Z6Z7 4374 aaKnown RBP4.78□□□□□ -1.64
VMA21-201ENST00000330374 A0A087X002 238 aa4.78□□□□□ -1.64
VMA21-201ENST00000330374 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
VMA21-201ENST00000330374 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
VMA21-201ENST00000330374 MOBPQ13875 183 aa4.77□□□□□ -1.65
VMA21-201ENST00000330374 HRES1P13985 223 aa4.77□□□□□ -1.65
VMA21-201ENST00000330374 SPRR1BP22528 89 aa4.77□□□□□ -1.65
VMA21-201ENST00000330374 TYMSOSQ8TAI1 123 aa4.76□□□□□ -1.65
VMA21-201ENST00000330374 Q96NJ1 140 aa4.76□□□□□ -1.65
VMA21-201ENST00000330374 RETNLBQ9BQ08 111 aa4.75□□□□□ -1.65
VMA21-201ENST00000330374 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
VMA21-201ENST00000330374 DNAH7Q8WXX0 4024 aa4.74□□□□□ -1.65
VMA21-201ENST00000330374 TP53AIP1Q9HCN2 124 aa4.74□□□□□ -1.65
VMA21-201ENST00000330374 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
VMA21-201ENST00000330374 A6NN06 94 aa4.74□□□□□ -1.65
VMA21-201ENST00000330374 C14orf177Q52M58 125 aa4.74□□□□□ -1.65
VMA21-201ENST00000330374 LINC01558Q9Y6Z2 57 aa4.73□□□□□ -1.65
VMA21-201ENST00000330374 MRPL34Q9BQ48 92 aaKnown RBP4.73□□□□□ -1.65
VMA21-201ENST00000330374 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.65
VMA21-201ENST00000330374 Q5W150 140 aa4.71□□□□□ -1.66
VMA21-201ENST00000330374 Q6ZR54 194 aa4.71□□□□□ -1.66
VMA21-201ENST00000330374 DNAH3Q8TD57 4116 aa4.7□□□□□ -1.66
VMA21-201ENST00000330374 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
VMA21-201ENST00000330374 CIRBP-AS1Q8TBR5 109 aa4.7□□□□□ -1.66
VMA21-201ENST00000330374 C7orf65Q6ZTY9 151 aa4.69□□□□□ -1.66
VMA21-201ENST00000330374 TGP01266 2768 aa4.69□□□□□ -1.66
VMA21-201ENST00000330374 IGLV7-43P04211 117 aa4.68□□□□□ -1.66
VMA21-201ENST00000330374 APLNQ9ULZ1 77 aa4.68□□□□□ -1.66
VMA21-201ENST00000330374 PSORS1C2Q9UIG4 136 aa4.68□□□□□ -1.66
VMA21-201ENST00000330374 ASB16-AS1Q495Z4 193 aa4.68□□□□□ -1.66
VMA21-201ENST00000330374 NBDYA0A0U1RRE5 68 aa4.67□□□□□ -1.66
VMA21-201ENST00000330374 PLECQ15149 4684 aaKnown RBP4.67□□□□□ -1.66
VMA21-201ENST00000330374 PLAC8Q9NZF1 115 aa4.67□□□□□ -1.66
VMA21-201ENST00000330374 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
VMA21-201ENST00000330374 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.66
VMA21-201ENST00000330374 LINC00313P59037 77 aa4.64□□□□□ -1.67
VMA21-201ENST00000330374 FBN3Q75N90 2809 aa4.64□□□□□ -1.67
VMA21-201ENST00000330374 ACYP2P14621 99 aa4.64□□□□□ -1.67
VMA21-201ENST00000330374 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
VMA21-201ENST00000330374 LINC00483Q53H64 154 aa4.62□□□□□ -1.67
VMA21-201ENST00000330374 A0A1B0GU69 56 aa4.62□□□□□ -1.67
VMA21-201ENST00000330374 ZNF861PO60384 105 aa4.62□□□□□ -1.67
VMA21-201ENST00000330374 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
VMA21-201ENST00000330374 RTL8CO15255 209 aa4.61□□□□□ -1.67
VMA21-201ENST00000330374 LORP23490 312 aaPredicted RBP4.61□□□□□ -1.67
VMA21-201ENST00000330374 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
VMA21-201ENST00000330374 MEGF8Q7Z7M0 2845 aa4.6□□□□□ -1.67
VMA21-201ENST00000330374 A0A087WTM6 91 aa4.6□□□□□ -1.67
VMA21-201ENST00000330374 HECTD4Q9Y4D8 3996 aa4.58□□□□□ -1.68
VMA21-201ENST00000330374 SPINK1P00995 79 aa4.58□□□□□ -1.68
VMA21-201ENST00000330374 KRTAP13-3Q3SY46 172 aa4.57□□□□□ -1.68
VMA21-201ENST00000330374 KMT2AQ03164 3969 aa4.57□□□□□ -1.68
VMA21-201ENST00000330374 LINC01554Q52M75 96 aa4.56□□□□□ -1.68
VMA21-201ENST00000330374 STARD9Q9P2P6 4700 aa4.56□□□□□ -1.68
VMA21-201ENST00000330374 DNAH17Q9UFH2 4485 aa4.55□□□□□ -1.68
VMA21-201ENST00000330374 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
VMA21-201ENST00000330374 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
VMA21-201ENST00000330374 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
VMA21-201ENST00000330374 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
VMA21-201ENST00000330374 Q8N1X5 172 aa4.54□□□□□ -1.68
VMA21-201ENST00000330374 NUPR2A6NF83 97 aa4.53□□□□□ -1.68
VMA21-201ENST00000330374 UQCR11O14957 56 aa4.52□□□□□ -1.69
VMA21-201ENST00000330374 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
VMA21-201ENST00000330374 FLG2Q5D862 2391 aaPredicted RBP4.5□□□□□ -1.69
VMA21-201ENST00000330374 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
VMA21-201ENST00000330374 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
VMA21-201ENST00000330374 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
VMA21-201ENST00000330374 DYNC2H1Q8NCM8 4307 aaKnown RBP4.48□□□□□ -1.69
VMA21-201ENST00000330374 SSBP3-AS1Q7Z2R9 100 aa4.48□□□□□ -1.69
VMA21-201ENST00000330374 VPS13DQ5THJ4 4388 aa4.48□□□□□ -1.69
VMA21-201ENST00000330374 LY6G6CO95867 125 aa4.47□□□□□ -1.69
VMA21-201ENST00000330374 KRTAP13-2Q52LG2 175 aa4.47□□□□□ -1.69
VMA21-201ENST00000330374 C1orf134Q5TEV5 83 aa4.47□□□□□ -1.69
VMA21-201ENST00000330374 DNAH11Q96DT5 4516 aa4.47□□□□□ -1.69
VMA21-201ENST00000330374 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
VMA21-201ENST00000330374 PRKDCP78527 4128 aaKnown RBP4.45□□□□□ -1.7
VMA21-201ENST00000330374 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
VMA21-201ENST00000330374 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
VMA21-201ENST00000330374 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
VMA21-201ENST00000330374 LRP1BQ9NZR2 4599 aa4.41□□□□□ -1.7
VMA21-201ENST00000330374 DMBT1Q9UGM3 2413 aaPredicted RBP4.4□□□□□ -1.71
VMA21-201ENST00000330374 DNAH5Q8TE73 4624 aa4.39□□□□□ -1.71
VMA21-201ENST00000330374 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
VMA21-201ENST00000330374 C9orf92A6NGG3 77 aa4.37□□□□□ -1.71
VMA21-201ENST00000330374 KRTAP10-1P60331 282 aa4.37□□□□□ -1.71
VMA21-201ENST00000330374 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
VMA21-201ENST00000330374 Q6ZSA8 131 aa4.35□□□□□ -1.71
VMA21-201ENST00000330374 H0YAA0 97 aa4.34□□□□□ -1.71
VMA21-201ENST00000330374 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
VMA21-201ENST00000330374 A0A1B0GU33 70 aa4.31□□□□□ -1.72
VMA21-201ENST00000330374 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
VMA21-201ENST00000330374 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
VMA21-201ENST00000330374 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
VMA21-201ENST00000330374 A8MUU9 505 aa4.29□□□□□ -1.72
VMA21-201ENST00000330374 SMR3BP02814 79 aaPredicted RBP4.29□□□□□ -1.72
VMA21-201ENST00000330374 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
VMA21-201ENST00000330374 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms