RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 C21orf62-AS1Q17RA5 79 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 A0A1W2PNM2 257 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 hADV29S1A0JD25 119 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 TMEM218A2RU14 115 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 VAMP3Q15836 100 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 ZCCHC13Q8WW36 166 aaKnown RBP1.19□□□□□ -2.22
HIF1A-201ENST00000323441 HSPB8Q9UJY1 196 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 C8orf87E5RJ46 101 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 LEPROTL1O95214 131 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 H1FX-AS1Q4G0G2 97 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 Q6ZQY7 126 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 SMIM11BQ8TCY0 68 aa1.19□□□□□ -2.22
HIF1A-201ENST00000323441 HSBP1O75506 76 aa1.18□□□□□ -2.22
HIF1A-201ENST00000323441 RAB37Q96AX2 223 aa1.18□□□□□ -2.22
HIF1A-201ENST00000323441 A0A087WSZ3 146 aa1.18□□□□□ -2.22
HIF1A-201ENST00000323441 KRTAP20-2Q3LI61 65 aa1.18□□□□□ -2.22
HIF1A-201ENST00000323441 A6NDN8 102 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 SERF1AO75920 110 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 CLLU1Q5K131 121 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 SIGMAR1Q99720 223 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 SNHG12Q9BXW3 62 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 LINC00472Q9H8W2 130 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 PRO2289Q9P1D8 64 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 TRBV7-4A0A0J9YYF1 115 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 H0Y8G0 127 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 IGKV4-1P06312 121 aa1.17□□□□□ -2.22
HIF1A-201ENST00000323441 H3BUT2 72 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 BVES-AS1Q5T3Y7 98 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 C12orf57Q99622 126 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 IGKV2D-30A0A075B6S6 120 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 SMIM6P0DI80 62 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 KLKP1Q107X0 134 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 LINC01545Q5VT33 79 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 DSCR8Q96T75 97 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 CRIPTQ9P021 101 aa1.16□□□□□ -2.22
HIF1A-201ENST00000323441 A0A1B0GVX0 72 aa1.15□□□□□ -2.23
HIF1A-201ENST00000323441 NDUFV3P56181 108 aaKnown RBP1.15□□□□□ -2.23
HIF1A-201ENST00000323441 MUSTN1Q8IVN3 82 aa1.15□□□□□ -2.23
HIF1A-201ENST00000323441 PMCHL2Q9BQD1 86 aa1.15□□□□□ -2.23
HIF1A-201ENST00000323441 A0A1B0GV90 55 aa1.15□□□□□ -2.23
HIF1A-201ENST00000323441 SCGB1A1P11684 91 aa1.15□□□□□ -2.23
HIF1A-201ENST00000323441 KRTAP10-7P60409 375 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-201ENST00000323441 IGHV6-1A0A0B4J1U7 121 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 TRGC2P03986 189 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 SCGB1D4Q6XE38 83 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 A0A1B0GX51 115 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 SYS1-DBNDD2H3BUS1 97 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 SNCGO76070 127 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 PET117Q6UWS5 81 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 FAM236AA0A1B0GUQ0 79 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 FAM236BA0A1B0GV22 79 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 FABP4P15090 132 aa1.14□□□□□ -2.23
HIF1A-201ENST00000323441 IGKV3D-7A0A0C4DH55 119 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 H3BMG7 143 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 H3BQ85 93 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 J3KT08 172 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 DLEU1O43261 78 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 KRTAP19-7Q3SYF9 63 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 TTTY13Q9BZ97 58 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 IMUPQ9GZP8 106 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 H0YGX0 51 aa1.13□□□□□ -2.23
HIF1A-201ENST00000323441 MT1EP04732 61 aa1.12□□□□□ -2.23
HIF1A-201ENST00000323441 RBM3P98179 157 aaKnown RBP1.12□□□□□ -2.23
HIF1A-201ENST00000323441 PRR15Q8IV56 129 aa1.12□□□□□ -2.23
HIF1A-201ENST00000323441 SVBPQ8N300 66 aa1.12□□□□□ -2.23
HIF1A-201ENST00000323441 SNRPEP62304 92 aaKnown RBP1.12□□□□□ -2.23
HIF1A-201ENST00000323441 ANKRD29Q8N6D5 301 aa1.12□□□□□ -2.23
HIF1A-201ENST00000323441 CSAG1Q6PB30 78 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 C2orf91Q6ZV80 131 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 CYSTM1Q9H1C7 97 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 DEFB116Q30KQ4 102 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 PYY3Q5JQD4 70 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 COA6Q5JTJ3 125 aaKnown RBP1.11□□□□□ -2.23
HIF1A-201ENST00000323441 KRTAP5-5Q701N2 237 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-201ENST00000323441 K7EQZ3 153 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 NDUFB1O75438 58 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 TRACP01848 142 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 C8orf17Q9NRJ1 99 aa1.11□□□□□ -2.23
HIF1A-201ENST00000323441 CCKP06307 115 aa1.1□□□□□ -2.23
HIF1A-201ENST00000323441 C7orf65Q6ZTY9 151 aa1.1□□□□□ -2.23
HIF1A-201ENST00000323441 A0A1B0GW54 56 aa1.1□□□□□ -2.23
HIF1A-201ENST00000323441 MT1GP13640 62 aa1.1□□□□□ -2.23
HIF1A-201ENST00000323441 C5orf47Q569G3 176 aa1.1□□□□□ -2.23
HIF1A-201ENST00000323441 Q6ZVQ6 151 aa1.1□□□□□ -2.23
HIF1A-201ENST00000323441 APOC3P02656 99 aa1.09□□□□□ -2.23
HIF1A-201ENST00000323441 LYRM7Q5U5X0 104 aa1.09□□□□□ -2.23
HIF1A-201ENST00000323441 TMEM254Q8TBM7 123 aa1.09□□□□□ -2.23
HIF1A-201ENST00000323441 S4R3F8 94 aa1.09□□□□□ -2.23
HIF1A-201ENST00000323441 TMEM256-PLSCR3K7ERE1 68 aa1.09□□□□□ -2.23
HIF1A-201ENST00000323441 FABP2P12104 132 aa1.09□□□□□ -2.23
HIF1A-201ENST00000323441 UBE2V1Q13404 147 aa1.09□□□□□ -2.24
HIF1A-201ENST00000323441 A0A0B4J2C4 111 aa1.08□□□□□ -2.24
HIF1A-201ENST00000323441 LCA10Q71F78 164 aa1.08□□□□□ -2.24
HIF1A-201ENST00000323441 MRPL34Q9BQ48 92 aaKnown RBP1.08□□□□□ -2.24
HIF1A-201ENST00000323441 H0YAA0 97 aa1.08□□□□□ -2.24
HIF1A-201ENST00000323441 MT1MQ8N339 61 aa1.08□□□□□ -2.24
HIF1A-201ENST00000323441 ORMDL1Q9P0S3 153 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms