RNA–Protein interactions for RNA: ENST00000315965.6

CCDC71L-201, Transcript of coiled-coil domain containing 71 like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC71L, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71L-201ENST00000315965 PRR15Q8IV56 129 aa13.41□□□□□ -0.26
CCDC71L-201ENST00000315965 PRR4Q16378 134 aa13.4□□□□□ -0.26
CCDC71L-201ENST00000315965 Q8N9L7 120 aa13.4□□□□□ -0.26
CCDC71L-201ENST00000315965 IGLV7-46A0A075B6I9 117 aa13.38□□□□□ -0.27
CCDC71L-201ENST00000315965 IGHV6-1A0A0B4J1U7 121 aa13.37□□□□□ -0.27
CCDC71L-201ENST00000315965 MT-ATP8P03928 68 aa13.36□□□□□ -0.27
CCDC71L-201ENST00000315965 HIST1H4AP62805 103 aaKnown RBP13.33□□□□□ -0.28
CCDC71L-201ENST00000315965 C8orf87E5RJ46 101 aa13.31□□□□□ -0.28
CCDC71L-201ENST00000315965 LINC00313P59037 77 aa13.29□□□□□ -0.28
CCDC71L-201ENST00000315965 C8orf17Q9NRJ1 99 aa13.28□□□□□ -0.28
CCDC71L-201ENST00000315965 IMUPQ9GZP8 106 aa13.28□□□□□ -0.28
CCDC71L-201ENST00000315965 HERC1Q15751 4861 aa13.27□□□□□ -0.28
CCDC71L-201ENST00000315965 NOTCH2NLQ7Z3S9 236 aa13.27□□□□□ -0.29
CCDC71L-201ENST00000315965 C9orf92A6NGG3 77 aa13.24□□□□□ -0.29
CCDC71L-201ENST00000315965 MMP24-AS1A0A0U1RRL7 71 aa13.24□□□□□ -0.29
CCDC71L-201ENST00000315965 KRTAP13-3Q3SY46 172 aa13.23□□□□□ -0.29
CCDC71L-201ENST00000315965 A0A087WVE0 104 aa13.22□□□□□ -0.29
CCDC71L-201ENST00000315965 HCG22E2RYF7 251 aa13.22□□□□□ -0.29
CCDC71L-201ENST00000315965 TPRXLQ17RH7 258 aa13.21□□□□□ -0.29
CCDC71L-201ENST00000315965 hDV103S1A0JD37 113 aa13.19□□□□□ -0.3
CCDC71L-201ENST00000315965 WFDC13Q8IUB5 93 aa13.18□□□□□ -0.3
CCDC71L-201ENST00000315965 CASC2Q6XLA1 102 aa13.17□□□□□ -0.3
CCDC71L-201ENST00000315965 TMEM254Q8TBM7 123 aa13.15□□□□□ -0.3
CCDC71L-201ENST00000315965 KRTAP16-1A8MUX0 517 aa13.14□□□□□ -0.31
CCDC71L-201ENST00000315965 MRPL34Q9BQ48 92 aaKnown RBP13.11□□□□□ -0.31
CCDC71L-201ENST00000315965 LPAP08519 4548 aa13.07□□□□□ -0.32
CCDC71L-201ENST00000315965 XP32Q5T750 250 aa13.07□□□□□ -0.32
CCDC71L-201ENST00000315965 HMCN2Q8NDA2 5059 aa13.06□□□□□ -0.32
CCDC71L-201ENST00000315965 Q8N9P0 234 aaPredicted RBP13.04□□□□□ -0.32
CCDC71L-201ENST00000315965 C20orf166-AS1Q96NR2 134 aa13.03□□□□□ -0.32
CCDC71L-201ENST00000315965 FAM236AA0A1B0GUQ0 79 aa13.03□□□□□ -0.32
CCDC71L-201ENST00000315965 FAM236BA0A1B0GV22 79 aa13.03□□□□□ -0.32
CCDC71L-201ENST00000315965 A8MUU9 505 aa13.02□□□□□ -0.33
CCDC71L-201ENST00000315965 NDUFS5O43920 106 aa13.01□□□□□ -0.33
CCDC71L-201ENST00000315965 Q75L30 129 aa12.99□□□□□ -0.33
CCDC71L-201ENST00000315965 SCGB1A1P11684 91 aa12.98□□□□□ -0.33
CCDC71L-201ENST00000315965 RPL37P61927 97 aaKnown RBP12.94□□□□□ -0.34
CCDC71L-201ENST00000315965 LRP2P98164 4655 aa12.94□□□□□ -0.34
CCDC71L-201ENST00000315965 TP53AIP1Q9HCN2 124 aa12.91□□□□□ -0.34
CCDC71L-201ENST00000315965 ATOX1O00244 68 aa12.87□□□□□ -0.35
CCDC71L-201ENST00000315965 ATP11AUNQ6ZP68 121 aa12.86□□□□□ -0.35
CCDC71L-201ENST00000315965 OCR1Q9BZK8 76 aa12.86□□□□□ -0.35
CCDC71L-201ENST00000315965 SMIM20Q8N5G0 67 aa12.83□□□□□ -0.36
CCDC71L-201ENST00000315965 UQCRQO14949 82 aa12.82□□□□□ -0.36
CCDC71L-201ENST00000315965 ZCCHC13Q8WW36 166 aaKnown RBP12.82□□□□□ -0.36
CCDC71L-201ENST00000315965 SEC61BP60468 96 aaKnown RBP12.79□□□□□ -0.36
CCDC71L-201ENST00000315965 Q5W150 140 aa12.77□□□□□ -0.37
CCDC71L-201ENST00000315965 PCOTHQ58A44 107 aa12.76□□□□□ -0.37
CCDC71L-201ENST00000315965 TRAV7A0A075B6U4 112 aa12.75□□□□□ -0.37
CCDC71L-201ENST00000315965 TRAV22A0A0B4J277 110 aa12.73□□□□□ -0.37
CCDC71L-201ENST00000315965 MUC17Q685J3 4493 aa12.7□□□□□ -0.38
CCDC71L-201ENST00000315965 C5orf47Q569G3 176 aa12.69□□□□□ -0.38
CCDC71L-201ENST00000315965 SERP2Q8N6R1 65 aa12.69□□□□□ -0.38
CCDC71L-201ENST00000315965 H0Y9P7 68 aa12.68□□□□□ -0.38
CCDC71L-201ENST00000315965 MP68P56378 58 aa12.65□□□□□ -0.38
CCDC71L-201ENST00000315965 ANAPC13Q9BS18 74 aa12.64□□□□□ -0.39
CCDC71L-201ENST00000315965 PCP4P48539 62 aa12.61□□□□□ -0.39
CCDC71L-201ENST00000315965 H3BPC8 53 aa12.57□□□□□ -0.4
CCDC71L-201ENST00000315965 IGKV2D-30A0A075B6S6 120 aa12.56□□□□□ -0.4
CCDC71L-201ENST00000315965 IGKV2-30P06310 120 aa12.56□□□□□ -0.4
CCDC71L-201ENST00000315965 LINC00208Q96KT6 92 aa12.56□□□□□ -0.4
CCDC71L-201ENST00000315965 LOC101927531A0A1B0GV80 90 aa12.56□□□□□ -0.4
CCDC71L-201ENST00000315965 COX7CP15954 63 aa12.56□□□□□ -0.4
CCDC71L-201ENST00000315965 C1orf64Q8NEQ6 169 aa12.55□□□□□ -0.4
CCDC71L-201ENST00000315965 SPINK7P58062 85 aa12.54□□□□□ -0.4
CCDC71L-201ENST00000315965 C7orf65Q6ZTY9 151 aa12.54□□□□□ -0.4
CCDC71L-201ENST00000315965 UBR4Q5T4S7 5183 aa12.5□□□□□ -0.41
CCDC71L-201ENST00000315965 C20orf197Q8N268 126 aa12.47□□□□□ -0.41
CCDC71L-201ENST00000315965 CYP4F30PQ9H0H9 118 aa12.47□□□□□ -0.41
CCDC71L-201ENST00000315965 A0A0U1RQV1 116 aa12.47□□□□□ -0.41
CCDC71L-201ENST00000315965 KRTAP4-1Q9BYQ7 146 aa12.46□□□□□ -0.42
CCDC71L-201ENST00000315965 SNURFQ9Y675 71 aa12.42□□□□□ -0.42
CCDC71L-201ENST00000315965 KLKP1Q107X0 134 aa12.38□□□□□ -0.43
CCDC71L-201ENST00000315965 HRES1P13985 223 aa12.35□□□□□ -0.43
CCDC71L-201ENST00000315965 RNF213Q63HN8 5207 aa12.34□□□□□ -0.43
CCDC71L-201ENST00000315965 CCDC179H3BU77 68 aa12.34□□□□□ -0.43
CCDC71L-201ENST00000315965 MUC2Q02817 5179 aa12.33□□□□□ -0.44
CCDC71L-201ENST00000315965 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
CCDC71L-201ENST00000315965 RBM12B-AS1Q9P1G2 102 aa12.25□□□□□ -0.45
CCDC71L-201ENST00000315965 C4orf26Q17RF5 130 aa12.24□□□□□ -0.45
CCDC71L-201ENST00000315965 NDUFC1O43677 76 aa12.23□□□□□ -0.45
CCDC71L-201ENST00000315965 CYSTM1Q9H1C7 97 aa12.21□□□□□ -0.46
CCDC71L-201ENST00000315965 COX6B2Q6YFQ2 88 aa12.16□□□□□ -0.46
CCDC71L-201ENST00000315965 H7BZZ5 65 aa12.15□□□□□ -0.46
CCDC71L-201ENST00000315965 FAM236DA0A1B0GTK5 79 aa12.13□□□□□ -0.47
CCDC71L-201ENST00000315965 FAM236CP0DP71 79 aa12.13□□□□□ -0.47
CCDC71L-201ENST00000315965 SPANXA2-OT1Q8N9U9 137 aa12.1□□□□□ -0.47
CCDC71L-201ENST00000315965 KRTAP19-2Q3LHN2 52 aa12.05□□□□□ -0.48
CCDC71L-201ENST00000315965 KRTAP3-1Q9BYR8 98 aa12.05□□□□□ -0.48
CCDC71L-201ENST00000315965 A8MUN3 132 aa12.04□□□□□ -0.48
CCDC71L-201ENST00000315965 DMAC1Q96GE9 116 aa12.01□□□□□ -0.49
CCDC71L-201ENST00000315965 H1FX-AS1Q4G0G2 97 aa12□□□□□ -0.49
CCDC71L-201ENST00000315965 TMEM258P61165 79 aa11.93□□□□□ -0.5
CCDC71L-201ENST00000315965 LCE2CQ5TA81 110 aa11.93□□□□□ -0.5
CCDC71L-201ENST00000315965 ACYP2P14621 99 aa11.92□□□□□ -0.5
CCDC71L-201ENST00000315965 FAT4Q6V0I7 4981 aa11.91□□□□□ -0.5
CCDC71L-201ENST00000315965 ATP5EP56381 51 aaPredicted RBP11.88□□□□□ -0.51
CCDC71L-201ENST00000315965 FLGP20930 4061 aaPredicted RBP11.88□□□□□ -0.51
CCDC71L-201ENST00000315965 S4R3F8 94 aa11.81□□□□□ -0.52
CCDC71L-201ENST00000315965 LCA10Q71F78 164 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms