RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 H3BPC8 53 aa12.37□□□□□ -0.43
LPCAT4-201ENST00000314891 C1orf64Q8NEQ6 169 aa12.37□□□□□ -0.43
LPCAT4-201ENST00000314891 SSBP3-AS1Q7Z2R9 100 aa12.36□□□□□ -0.43
LPCAT4-201ENST00000314891 CD164Q04900 197 aa12.34□□□□□ -0.43
LPCAT4-201ENST00000314891 KRTAP13-2Q52LG2 175 aa12.33□□□□□ -0.44
LPCAT4-201ENST00000314891 CYP4F30PQ9H0H9 118 aa12.32□□□□□ -0.44
LPCAT4-201ENST00000314891 NDUFS5O43920 106 aa12.31□□□□□ -0.44
LPCAT4-201ENST00000314891 MRPL34Q9BQ48 92 aaKnown RBP12.31□□□□□ -0.44
LPCAT4-201ENST00000314891 TP53AIP1Q9HCN2 124 aa12.31□□□□□ -0.44
LPCAT4-201ENST00000314891 VPS13BQ7Z7G8 4022 aa12.31□□□□□ -0.44
LPCAT4-201ENST00000314891 MPLKIPQ8TAP9 179 aa12.28□□□□□ -0.44
LPCAT4-201ENST00000314891 PKHD1P08F94 4074 aa12.27□□□□□ -0.45
LPCAT4-201ENST00000314891 KRTAP1-4P0C5Y4 121 aa12.25□□□□□ -0.45
LPCAT4-201ENST00000314891 SPANXA2-OT1Q8N9U9 137 aa12.24□□□□□ -0.45
LPCAT4-201ENST00000314891 PCOTHQ58A44 107 aa12.21□□□□□ -0.46
LPCAT4-201ENST00000314891 SACSQ9NZJ4 4579 aa12.2□□□□□ -0.46
LPCAT4-201ENST00000314891 C1orf195Q5TG92 126 aa12.16□□□□□ -0.46
LPCAT4-201ENST00000314891 Q5W150 140 aa12.14□□□□□ -0.47
LPCAT4-201ENST00000314891 IGLV7-46A0A075B6I9 117 aa12.12□□□□□ -0.47
LPCAT4-201ENST00000314891 PLA2G1BP04054 148 aaKnown RBP12.12□□□□□ -0.47
LPCAT4-201ENST00000314891 LINC00336Q6ZUF6 198 aa12.12□□□□□ -0.47
LPCAT4-201ENST00000314891 C8orf87E5RJ46 101 aa12.11□□□□□ -0.47
LPCAT4-201ENST00000314891 KRTAP13-3Q3SY46 172 aa12.09□□□□□ -0.47
LPCAT4-201ENST00000314891 LINC00313P59037 77 aa12.08□□□□□ -0.48
LPCAT4-201ENST00000314891 Q1T7F1 81 aa12.07□□□□□ -0.48
LPCAT4-201ENST00000314891 TYMSOSQ8TAI1 123 aa12.04□□□□□ -0.48
LPCAT4-201ENST00000314891 LIMD2Q9BT23 127 aa12.03□□□□□ -0.48
LPCAT4-201ENST00000314891 SMR3BP02814 79 aaPredicted RBP12.02□□□□□ -0.49
LPCAT4-201ENST00000314891 Q8N9P0 234 aaPredicted RBP12.01□□□□□ -0.49
LPCAT4-201ENST00000314891 LOC101927531A0A1B0GV80 90 aa12□□□□□ -0.49
LPCAT4-201ENST00000314891 COA5Q86WW8 74 aa12□□□□□ -0.49
LPCAT4-201ENST00000314891 DYNC1H1Q14204 4646 aaKnown RBP11.99□□□□□ -0.49
LPCAT4-201ENST00000314891 A0A1B0GVY2 172 aa11.99□□□□□ -0.49
LPCAT4-201ENST00000314891 KRTAP16-1A8MUX0 517 aa11.98□□□□□ -0.49
LPCAT4-201ENST00000314891 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
LPCAT4-201ENST00000314891 PRR26Q8N8Z3 221 aa11.97□□□□□ -0.49
LPCAT4-201ENST00000314891 RETNLBQ9BQ08 111 aa11.97□□□□□ -0.49
LPCAT4-201ENST00000314891 PSPHP1O15172 72 aa11.96□□□□□ -0.49
LPCAT4-201ENST00000314891 SPINK1P00995 79 aa11.94□□□□□ -0.5
LPCAT4-201ENST00000314891 BRK1Q8WUW1 75 aa11.91□□□□□ -0.5
LPCAT4-201ENST00000314891 FAM229AH3BQW9 127 aa11.9□□□□□ -0.5
LPCAT4-201ENST00000314891 HRES1P13985 223 aa11.89□□□□□ -0.51
LPCAT4-201ENST00000314891 PRO0628Q9UI54 55 aa11.89□□□□□ -0.51
LPCAT4-201ENST00000314891 A8MUN3 132 aa11.88□□□□□ -0.51
LPCAT4-201ENST00000314891 LINC00304Q8N9R0 145 aa11.88□□□□□ -0.51
LPCAT4-201ENST00000314891 APOBP04114 4563 aaKnown RBP11.87□□□□□ -0.51
LPCAT4-201ENST00000314891 V9GYY9 64 aa11.86□□□□□ -0.51
LPCAT4-201ENST00000314891 FAT1Q14517 4588 aa11.86□□□□□ -0.51
LPCAT4-201ENST00000314891 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
LPCAT4-201ENST00000314891 RYR2Q92736 4967 aa11.86□□□□□ -0.51
LPCAT4-201ENST00000314891 KMT2CQ8NEZ4 4911 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-201ENST00000314891 IGKV2-30P06310 120 aa11.81□□□□□ -0.52
LPCAT4-201ENST00000314891 Q5VV11 94 aa11.79□□□□□ -0.52
LPCAT4-201ENST00000314891 RPS29P62273 56 aaKnown RBP11.78□□□□□ -0.52
LPCAT4-201ENST00000314891 SPAG11AQ6PDA7 123 aa11.76□□□□□ -0.53
LPCAT4-201ENST00000314891 PRR15LQ9BU68 103 aa11.76□□□□□ -0.53
LPCAT4-201ENST00000314891 PKHD1L1Q86WI1 4243 aa11.73□□□□□ -0.53
LPCAT4-201ENST00000314891 IGKV2D-30A0A075B6S6 120 aa11.71□□□□□ -0.54
LPCAT4-201ENST00000314891 DMAC1Q96GE9 116 aa11.7□□□□□ -0.54
LPCAT4-201ENST00000314891 ACYP2P14621 99 aa11.69□□□□□ -0.54
LPCAT4-201ENST00000314891 LINC01558Q9Y6Z2 57 aa11.66□□□□□ -0.54
LPCAT4-201ENST00000314891 CHKB-CPT1BH3BT56 60 aa11.65□□□□□ -0.54
LPCAT4-201ENST00000314891 A8MU10 97 aa11.62□□□□□ -0.55
LPCAT4-201ENST00000314891 C9orf92A6NGG3 77 aa11.61□□□□□ -0.55
LPCAT4-201ENST00000314891 Q75L30 129 aa11.61□□□□□ -0.55
LPCAT4-201ENST00000314891 FLG2Q5D862 2391 aaPredicted RBP11.54□□□□□ -0.56
LPCAT4-201ENST00000314891 C7orf65Q6ZTY9 151 aa11.51□□□□□ -0.57
LPCAT4-201ENST00000314891 A6NED7 52 aa11.5□□□□□ -0.57
LPCAT4-201ENST00000314891 A8MUU9 505 aa11.49□□□□□ -0.57
LPCAT4-201ENST00000314891 C20orf166-AS1Q96NR2 134 aa11.49□□□□□ -0.57
LPCAT4-201ENST00000314891 LCA10Q71F78 164 aa11.47□□□□□ -0.57
LPCAT4-201ENST00000314891 LRP1Q07954 4544 aaKnown RBP11.46□□□□□ -0.57
LPCAT4-201ENST00000314891 HSPG2P98160 4391 aa11.45□□□□□ -0.58
LPCAT4-201ENST00000314891 Q8N1X5 172 aa11.44□□□□□ -0.58
LPCAT4-201ENST00000314891 RYR3Q15413 4870 aa11.44□□□□□ -0.58
LPCAT4-201ENST00000314891 SPINK7P58062 85 aa11.43□□□□□ -0.58
LPCAT4-201ENST00000314891 Q5VSD8 79 aa11.42□□□□□ -0.58
LPCAT4-201ENST00000314891 TNXBP22105 4242 aa11.41□□□□□ -0.58
LPCAT4-201ENST00000314891 KRTAP17-1Q9BYP8 105 aa11.37□□□□□ -0.59
LPCAT4-201ENST00000314891 KRTAP10-8P60410 259 aa11.36□□□□□ -0.59
LPCAT4-201ENST00000314891 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
LPCAT4-201ENST00000314891 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
LPCAT4-201ENST00000314891 A0A1B0GU69 56 aa11.3□□□□□ -0.6
LPCAT4-201ENST00000314891 SPTSSBQ8NFR3 76 aa11.29□□□□□ -0.6
LPCAT4-201ENST00000314891 RYR1P21817 5038 aa11.29□□□□□ -0.6
LPCAT4-201ENST00000314891 DMBT1Q9UGM3 2413 aaPredicted RBP11.28□□□□□ -0.6
LPCAT4-201ENST00000314891 KRTAP3-1Q9BYR8 98 aa11.24□□□□□ -0.61
LPCAT4-201ENST00000314891 PMAIP1Q13794 54 aa11.24□□□□□ -0.61
LPCAT4-201ENST00000314891 ATP11AUNQ6ZP68 121 aa11.24□□□□□ -0.61
LPCAT4-201ENST00000314891 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
LPCAT4-201ENST00000314891 MYCBP2O75592 4640 aa11.14□□□□□ -0.63
LPCAT4-201ENST00000314891 MT1HL1P0DM35 61 aa11.1□□□□□ -0.63
LPCAT4-201ENST00000314891 A6NN06 94 aa11.09□□□□□ -0.63
LPCAT4-201ENST00000314891 XP32Q5T750 250 aa11.07□□□□□ -0.64
LPCAT4-201ENST00000314891 RPL37P61927 97 aaKnown RBP11.06□□□□□ -0.64
LPCAT4-201ENST00000314891 UQCR11O14957 56 aa11.05□□□□□ -0.64
LPCAT4-201ENST00000314891 SPATA8Q6RVD6 105 aa11.04□□□□□ -0.64
LPCAT4-201ENST00000314891 COX6B2Q6YFQ2 88 aa11.04□□□□□ -0.64
LPCAT4-201ENST00000314891 EPPK1P58107 5090 aaKnown RBP11.04□□□□□ -0.64
LPCAT4-201ENST00000314891 MIR22HGQ0VDD5 57 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms