RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
EIF3F-201ENST00000309828 ANAPC13Q9BS18 74 aa8.03□□□□□ -1.12
EIF3F-201ENST00000309828 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
EIF3F-201ENST00000309828 PCP4P48539 62 aa8.01□□□□□ -1.13
EIF3F-201ENST00000309828 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
EIF3F-201ENST00000309828 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
EIF3F-201ENST00000309828 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
EIF3F-201ENST00000309828 CASC2Q6XLA1 102 aa8□□□□□ -1.13
EIF3F-201ENST00000309828 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
EIF3F-201ENST00000309828 WFDC13Q8IUB5 93 aa7.98□□□□□ -1.13
EIF3F-201ENST00000309828 hDV103S1A0JD37 113 aa7.97□□□□□ -1.13
EIF3F-201ENST00000309828 TRAV7A0A075B6U4 112 aa7.96□□□□□ -1.14
EIF3F-201ENST00000309828 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
EIF3F-201ENST00000309828 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
EIF3F-201ENST00000309828 TMEM254Q8TBM7 123 aa7.95□□□□□ -1.14
EIF3F-201ENST00000309828 COX7CP15954 63 aa7.93□□□□□ -1.14
EIF3F-201ENST00000309828 LINC00313P59037 77 aa7.93□□□□□ -1.14
EIF3F-201ENST00000309828 OCR1Q9BZK8 76 aa7.93□□□□□ -1.14
EIF3F-201ENST00000309828 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
EIF3F-201ENST00000309828 UQCRQO14949 82 aa7.9□□□□□ -1.14
EIF3F-201ENST00000309828 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
EIF3F-201ENST00000309828 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
EIF3F-201ENST00000309828 FAT3Q8TDW7 4589 aa7.88□□□□□ -1.15
EIF3F-201ENST00000309828 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
EIF3F-201ENST00000309828 HERC1Q15751 4861 aa7.87□□□□□ -1.15
EIF3F-201ENST00000309828 TNXBP22105 4242 aa7.87□□□□□ -1.15
EIF3F-201ENST00000309828 DMBT1Q9UGM3 2413 aaPredicted RBP7.86□□□□□ -1.15
EIF3F-201ENST00000309828 RETNLBQ9BQ08 111 aa7.85□□□□□ -1.15
EIF3F-201ENST00000309828 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
EIF3F-201ENST00000309828 KRTAP16-1A8MUX0 517 aa7.84□□□□□ -1.15
EIF3F-201ENST00000309828 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
EIF3F-201ENST00000309828 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
EIF3F-201ENST00000309828 C5orf47Q569G3 176 aa7.83□□□□□ -1.16
EIF3F-201ENST00000309828 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
EIF3F-201ENST00000309828 NDUFS5O43920 106 aa7.82□□□□□ -1.16
EIF3F-201ENST00000309828 H3BPC8 53 aa7.78□□□□□ -1.16
EIF3F-201ENST00000309828 MP68P56378 58 aa7.78□□□□□ -1.16
EIF3F-201ENST00000309828 J3QL48 77 aa7.77□□□□□ -1.17
EIF3F-201ENST00000309828 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
EIF3F-201ENST00000309828 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
EIF3F-201ENST00000309828 TRAV22A0A0B4J277 110 aa7.76□□□□□ -1.17
EIF3F-201ENST00000309828 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
EIF3F-201ENST00000309828 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
EIF3F-201ENST00000309828 H0Y9P7 68 aa7.75□□□□□ -1.17
EIF3F-201ENST00000309828 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
EIF3F-201ENST00000309828 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
EIF3F-201ENST00000309828 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
EIF3F-201ENST00000309828 A8MUU9 505 aa7.72□□□□□ -1.17
EIF3F-201ENST00000309828 NDUFC1O43677 76 aa7.71□□□□□ -1.18
EIF3F-201ENST00000309828 PRR4Q16378 134 aa7.7□□□□□ -1.18
EIF3F-201ENST00000309828 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
EIF3F-201ENST00000309828 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
EIF3F-201ENST00000309828 SNURFQ9Y675 71 aa7.7□□□□□ -1.18
EIF3F-201ENST00000309828 LINC00208Q96KT6 92 aa7.69□□□□□ -1.18
EIF3F-201ENST00000309828 Q75L30 129 aa7.68□□□□□ -1.18
EIF3F-201ENST00000309828 Q5W150 140 aa7.67□□□□□ -1.18
EIF3F-201ENST00000309828 C1orf64Q8NEQ6 169 aa7.67□□□□□ -1.18
EIF3F-201ENST00000309828 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
EIF3F-201ENST00000309828 LOC101927531A0A1B0GV80 90 aa7.65□□□□□ -1.18
EIF3F-201ENST00000309828 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
EIF3F-201ENST00000309828 H7BZZ5 65 aa7.62□□□□□ -1.19
EIF3F-201ENST00000309828 XP32Q5T750 250 aa7.62□□□□□ -1.19
EIF3F-201ENST00000309828 TMEM258P61165 79 aa7.61□□□□□ -1.19
EIF3F-201ENST00000309828 RPL37P61927 97 aaKnown RBP7.6□□□□□ -1.19
EIF3F-201ENST00000309828 IGKV2-30P06310 120 aa7.58□□□□□ -1.2
EIF3F-201ENST00000309828 CYP4F30PQ9H0H9 118 aa7.57□□□□□ -1.2
EIF3F-201ENST00000309828 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
EIF3F-201ENST00000309828 ATP5EP56381 51 aaPredicted RBP7.55□□□□□ -1.2
EIF3F-201ENST00000309828 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
EIF3F-201ENST00000309828 FAM236DA0A1B0GTK5 79 aa7.52□□□□□ -1.21
EIF3F-201ENST00000309828 FAM236CP0DP71 79 aa7.52□□□□□ -1.21
EIF3F-201ENST00000309828 SPANXA2-OT1Q8N9U9 137 aa7.52□□□□□ -1.21
EIF3F-201ENST00000309828 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
EIF3F-201ENST00000309828 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
EIF3F-201ENST00000309828 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
EIF3F-201ENST00000309828 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
EIF3F-201ENST00000309828 SPINK7P58062 85 aa7.44□□□□□ -1.22
EIF3F-201ENST00000309828 HRES1P13985 223 aa7.43□□□□□ -1.22
EIF3F-201ENST00000309828 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
EIF3F-201ENST00000309828 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
EIF3F-201ENST00000309828 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
EIF3F-201ENST00000309828 DMAC1Q96GE9 116 aa7.34□□□□□ -1.23
EIF3F-201ENST00000309828 A8MUN3 132 aa7.32□□□□□ -1.24
EIF3F-201ENST00000309828 ACYP2P14621 99 aa7.31□□□□□ -1.24
EIF3F-201ENST00000309828 C4orf26Q17RF5 130 aa7.3□□□□□ -1.24
EIF3F-201ENST00000309828 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
EIF3F-201ENST00000309828 LPAP08519 4548 aa7.27□□□□□ -1.25
EIF3F-201ENST00000309828 COA5Q86WW8 74 aa7.25□□□□□ -1.25
EIF3F-201ENST00000309828 RNF213Q63HN8 5207 aa7.24□□□□□ -1.25
EIF3F-201ENST00000309828 LRP2P98164 4655 aa7.23□□□□□ -1.25
EIF3F-201ENST00000309828 MPLKIPQ8TAP9 179 aa7.21□□□□□ -1.26
EIF3F-201ENST00000309828 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
EIF3F-201ENST00000309828 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
EIF3F-201ENST00000309828 MUC17Q685J3 4493 aa7.19□□□□□ -1.26
EIF3F-201ENST00000309828 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
EIF3F-201ENST00000309828 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
EIF3F-201ENST00000309828 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.26
EIF3F-201ENST00000309828 H1FX-AS1Q4G0G2 97 aa7.11□□□□□ -1.27
EIF3F-201ENST00000309828 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
EIF3F-201ENST00000309828 V9GYY9 64 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 583 ms