RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 STARD9Q9P2P6 4700 aa9□□□□□ -0.97
CGGBP1-201ENST00000309534 PRR4Q16378 134 aa8.99□□□□□ -0.97
CGGBP1-201ENST00000309534 CHKB-CPT1BH3BT56 60 aa8.99□□□□□ -0.97
CGGBP1-201ENST00000309534 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
CGGBP1-201ENST00000309534 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
CGGBP1-201ENST00000309534 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.97
CGGBP1-201ENST00000309534 DNAH1Q9P2D7 4330 aa8.94□□□□□ -0.98
CGGBP1-201ENST00000309534 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
CGGBP1-201ENST00000309534 IGKV2-30P06310 120 aa8.93□□□□□ -0.98
CGGBP1-201ENST00000309534 V9GYY9 64 aa8.93□□□□□ -0.98
CGGBP1-201ENST00000309534 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.98
CGGBP1-201ENST00000309534 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.99
CGGBP1-201ENST00000309534 C9orf92A6NGG3 77 aa8.89□□□□□ -0.99
CGGBP1-201ENST00000309534 Q8N1X5 172 aa8.88□□□□□ -0.99
CGGBP1-201ENST00000309534 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
CGGBP1-201ENST00000309534 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
CGGBP1-201ENST00000309534 DNAH6Q9C0G6 4158 aa8.87□□□□□ -0.99
CGGBP1-201ENST00000309534 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
CGGBP1-201ENST00000309534 DNAH17Q9UFH2 4485 aa8.86□□□□□ -0.99
CGGBP1-201ENST00000309534 ACYP2P14621 99 aa8.86□□□□□ -0.99
CGGBP1-201ENST00000309534 ATP11AUNQ6ZP68 121 aa8.86□□□□□ -0.99
CGGBP1-201ENST00000309534 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
CGGBP1-201ENST00000309534 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
CGGBP1-201ENST00000309534 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
CGGBP1-201ENST00000309534 DNAH10Q8IVF4 4471 aa8.84□□□□□ -0.99
CGGBP1-201ENST00000309534 J3QL48 77 aa8.83□□□□□ -1
CGGBP1-201ENST00000309534 IGLV7-46A0A075B6I9 117 aa8.82□□□□□ -1
CGGBP1-201ENST00000309534 OXTP01178 125 aa8.81□□□□□ -1
CGGBP1-201ENST00000309534 Q5W150 140 aa8.8□□□□□ -1
CGGBP1-201ENST00000309534 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
CGGBP1-201ENST00000309534 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
CGGBP1-201ENST00000309534 CSMD3Q7Z407 3707 aa8.79□□□□□ -1
CGGBP1-201ENST00000309534 COA5Q86WW8 74 aa8.74□□□□□ -1.01
CGGBP1-201ENST00000309534 DNAH2Q9P225 4427 aa8.71□□□□□ -1.01
CGGBP1-201ENST00000309534 PRR15LQ9BU68 103 aa8.71□□□□□ -1.02
CGGBP1-201ENST00000309534 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
CGGBP1-201ENST00000309534 HRES1P13985 223 aa8.69□□□□□ -1.02
CGGBP1-201ENST00000309534 SEC61GP60059 68 aa8.69□□□□□ -1.02
CGGBP1-201ENST00000309534 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
CGGBP1-201ENST00000309534 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
CGGBP1-201ENST00000309534 A8MUN3 132 aa8.66□□□□□ -1.02
CGGBP1-201ENST00000309534 KRTAP16-1A8MUX0 517 aa8.64□□□□□ -1.03
CGGBP1-201ENST00000309534 Q75L30 129 aa8.64□□□□□ -1.03
CGGBP1-201ENST00000309534 A8MUU9 505 aa8.63□□□□□ -1.03
CGGBP1-201ENST00000309534 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
CGGBP1-201ENST00000309534 LYSTQ99698 3801 aa8.63□□□□□ -1.03
CGGBP1-201ENST00000309534 SRRM2Q9UQ35 2752 aaKnown RBP8.62□□□□□ -1.03
CGGBP1-201ENST00000309534 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
CGGBP1-201ENST00000309534 DNAH11Q96DT5 4516 aa8.57□□□□□ -1.04
CGGBP1-201ENST00000309534 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
CGGBP1-201ENST00000309534 SPINK7P58062 85 aa8.56□□□□□ -1.04
CGGBP1-201ENST00000309534 DNAH8Q96JB1 4490 aa8.55□□□□□ -1.04
CGGBP1-201ENST00000309534 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
CGGBP1-201ENST00000309534 PSPHP1O15172 72 aa8.53□□□□□ -1.04
CGGBP1-201ENST00000309534 Q1T7F1 81 aa8.53□□□□□ -1.04
CGGBP1-201ENST00000309534 HECTD4Q9Y4D8 3996 aa8.53□□□□□ -1.04
CGGBP1-201ENST00000309534 C4orf26Q17RF5 130 aa8.52□□□□□ -1.05
CGGBP1-201ENST00000309534 RPL37P61927 97 aaKnown RBP8.51□□□□□ -1.05
CGGBP1-201ENST00000309534 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
CGGBP1-201ENST00000309534 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
CGGBP1-201ENST00000309534 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
CGGBP1-201ENST00000309534 A6NED7 52 aa8.49□□□□□ -1.05
CGGBP1-201ENST00000309534 A0A1B0GU69 56 aa8.48□□□□□ -1.05
CGGBP1-201ENST00000309534 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
CGGBP1-201ENST00000309534 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.05
CGGBP1-201ENST00000309534 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
CGGBP1-201ENST00000309534 SACSQ9NZJ4 4579 aa8.45□□□□□ -1.06
CGGBP1-201ENST00000309534 LRP1BQ9NZR2 4599 aa8.43□□□□□ -1.06
CGGBP1-201ENST00000309534 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
CGGBP1-201ENST00000309534 XP32Q5T750 250 aa8.4□□□□□ -1.06
CGGBP1-201ENST00000309534 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
CGGBP1-201ENST00000309534 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.07
CGGBP1-201ENST00000309534 FAT2Q9NYQ8 4349 aa8.39□□□□□ -1.07
CGGBP1-201ENST00000309534 HYDINQ4G0P3 5121 aa8.37□□□□□ -1.07
CGGBP1-201ENST00000309534 RYR2Q92736 4967 aa8.36□□□□□ -1.07
CGGBP1-201ENST00000309534 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
CGGBP1-201ENST00000309534 FRAS1Q86XX4 4008 aa8.33□□□□□ -1.08
CGGBP1-201ENST00000309534 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
CGGBP1-201ENST00000309534 PKD1P98161 4303 aa8.29□□□□□ -1.08
CGGBP1-201ENST00000309534 UQCR11O14957 56 aa8.26□□□□□ -1.09
CGGBP1-201ENST00000309534 S4R3F8 94 aa8.24□□□□□ -1.09
CGGBP1-201ENST00000309534 K7ERS5 55 aa8.22□□□□□ -1.09
CGGBP1-201ENST00000309534 Q5VV11 94 aa8.21□□□□□ -1.09
CGGBP1-201ENST00000309534 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.1
CGGBP1-201ENST00000309534 APOBP04114 4563 aaKnown RBP8.19□□□□□ -1.1
CGGBP1-201ENST00000309534 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
CGGBP1-201ENST00000309534 FAT1Q14517 4588 aa8.15□□□□□ -1.1
CGGBP1-201ENST00000309534 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
CGGBP1-201ENST00000309534 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
CGGBP1-201ENST00000309534 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
CGGBP1-201ENST00000309534 KRTAP4-5Q9BYR2 181 aa8.13□□□□□ -1.11
CGGBP1-201ENST00000309534 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
CGGBP1-201ENST00000309534 PKHD1P08F94 4074 aa8.08□□□□□ -1.12
CGGBP1-201ENST00000309534 A0A1B0GU33 70 aa8.06□□□□□ -1.12
CGGBP1-201ENST00000309534 RYR1P21817 5038 aa8.06□□□□□ -1.12
CGGBP1-201ENST00000309534 KMT2CQ8NEZ4 4911 aaKnown RBP8.05□□□□□ -1.12
CGGBP1-201ENST00000309534 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
CGGBP1-201ENST00000309534 RYR3Q15413 4870 aa7.97□□□□□ -1.13
CGGBP1-201ENST00000309534 LCA10Q71F78 164 aa7.95□□□□□ -1.14
CGGBP1-201ENST00000309534 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms