RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PANO1I0J062 215 aa6.39□□□□□ -1.39
APOBEC3F-201ENST00000308521 C14orf177Q52M58 125 aa6.39□□□□□ -1.39
APOBEC3F-201ENST00000308521 A0A087WSZ3 146 aa6.38□□□□□ -1.39
APOBEC3F-201ENST00000308521 A0A087WTM6 91 aa6.38□□□□□ -1.39
APOBEC3F-201ENST00000308521 WFDC13Q8IUB5 93 aa6.38□□□□□ -1.39
APOBEC3F-201ENST00000308521 H0Y9P7 68 aa6.38□□□□□ -1.39
APOBEC3F-201ENST00000308521 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
APOBEC3F-201ENST00000308521 A0A0G2JQZ4 141 aa6.37□□□□□ -1.39
APOBEC3F-201ENST00000308521 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
APOBEC3F-201ENST00000308521 C1orf134Q5TEV5 83 aa6.37□□□□□ -1.39
APOBEC3F-201ENST00000308521 DEFB116Q30KQ4 102 aa6.37□□□□□ -1.39
APOBEC3F-201ENST00000308521 FRAS1Q86XX4 4008 aa6.36□□□□□ -1.39
APOBEC3F-201ENST00000308521 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
APOBEC3F-201ENST00000308521 SPRR1BP22528 89 aa6.35□□□□□ -1.39
APOBEC3F-201ENST00000308521 PRLHP81277 87 aa6.35□□□□□ -1.39
APOBEC3F-201ENST00000308521 RPL37AP61513 92 aaKnown RBP6.34□□□□□ -1.39
APOBEC3F-201ENST00000308521 A8MWP4 228 aa6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 LINC00313P59037 77 aa6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 SACSQ9NZJ4 4579 aa6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 H0Y9J4 135 aa6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 LINC00472Q9H8W2 130 aa6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
APOBEC3F-201ENST00000308521 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
APOBEC3F-201ENST00000308521 RTL8CO15255 209 aa6.32□□□□□ -1.4
APOBEC3F-201ENST00000308521 FAT2Q9NYQ8 4349 aa6.32□□□□□ -1.4
APOBEC3F-201ENST00000308521 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
APOBEC3F-201ENST00000308521 DNAH8Q96JB1 4490 aa6.3□□□□□ -1.4
APOBEC3F-201ENST00000308521 IGLV5-52A0A0A0MRZ9 124 aa6.29□□□□□ -1.4
APOBEC3F-201ENST00000308521 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
APOBEC3F-201ENST00000308521 PRR26Q8N8Z3 221 aa6.28□□□□□ -1.4
APOBEC3F-201ENST00000308521 PKD1P98161 4303 aa6.28□□□□□ -1.4
APOBEC3F-201ENST00000308521 SPINK7P58062 85 aa6.27□□□□□ -1.41
APOBEC3F-201ENST00000308521 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
APOBEC3F-201ENST00000308521 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
APOBEC3F-201ENST00000308521 KMT2CQ8NEZ4 4911 aaKnown RBP6.26□□□□□ -1.41
APOBEC3F-201ENST00000308521 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
APOBEC3F-201ENST00000308521 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
APOBEC3F-201ENST00000308521 TP53AIP1Q9HCN2 124 aa6.24□□□□□ -1.41
APOBEC3F-201ENST00000308521 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
APOBEC3F-201ENST00000308521 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
APOBEC3F-201ENST00000308521 Q96NJ1 140 aa6.2□□□□□ -1.42
APOBEC3F-201ENST00000308521 LRP1BQ9NZR2 4599 aa6.2□□□□□ -1.42
APOBEC3F-201ENST00000308521 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
APOBEC3F-201ENST00000308521 HRES1P13985 223 aa6.18□□□□□ -1.42
APOBEC3F-201ENST00000308521 PSORS1C2Q9UIG4 136 aa6.18□□□□□ -1.42
APOBEC3F-201ENST00000308521 RETNLBQ9BQ08 111 aa6.17□□□□□ -1.42
APOBEC3F-201ENST00000308521 C8orf17Q9NRJ1 99 aa6.17□□□□□ -1.42
APOBEC3F-201ENST00000308521 CIRBP-AS1Q8TBR5 109 aa6.17□□□□□ -1.42
APOBEC3F-201ENST00000308521 RYR2Q92736 4967 aa6.16□□□□□ -1.42
APOBEC3F-201ENST00000308521 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
APOBEC3F-201ENST00000308521 LINC00483Q53H64 154 aa6.15□□□□□ -1.43
APOBEC3F-201ENST00000308521 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
APOBEC3F-201ENST00000308521 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
APOBEC3F-201ENST00000308521 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
APOBEC3F-201ENST00000308521 ANAPC11Q9NYG5 84 aa6.12□□□□□ -1.43
APOBEC3F-201ENST00000308521 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
APOBEC3F-201ENST00000308521 ADM2Q7Z4H4 148 aa6.12□□□□□ -1.43
APOBEC3F-201ENST00000308521 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
APOBEC3F-201ENST00000308521 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
APOBEC3F-201ENST00000308521 DYNC1H1Q14204 4646 aaKnown RBP6.1□□□□□ -1.43
APOBEC3F-201ENST00000308521 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
APOBEC3F-201ENST00000308521 CDK2AP2O75956 126 aa6.09□□□□□ -1.43
APOBEC3F-201ENST00000308521 RYR3Q15413 4870 aa6.09□□□□□ -1.43
APOBEC3F-201ENST00000308521 Q6ZSA8 131 aa6.08□□□□□ -1.44
APOBEC3F-201ENST00000308521 ZNF861PO60384 105 aa6.07□□□□□ -1.44
APOBEC3F-201ENST00000308521 ACYP2P14621 99 aa6.07□□□□□ -1.44
APOBEC3F-201ENST00000308521 IGLV7-43P04211 117 aa6.06□□□□□ -1.44
APOBEC3F-201ENST00000308521 FAT1Q14517 4588 aa6.06□□□□□ -1.44
APOBEC3F-201ENST00000308521 UQCR11O14957 56 aa6.04□□□□□ -1.44
APOBEC3F-201ENST00000308521 SMR3BP02814 79 aaPredicted RBP6.04□□□□□ -1.44
APOBEC3F-201ENST00000308521 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
APOBEC3F-201ENST00000308521 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
APOBEC3F-201ENST00000308521 A0A1B0GU69 56 aa6.03□□□□□ -1.44
APOBEC3F-201ENST00000308521 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
APOBEC3F-201ENST00000308521 A0A1B0GVY2 172 aa6.02□□□□□ -1.44
APOBEC3F-201ENST00000308521 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.44
APOBEC3F-201ENST00000308521 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
APOBEC3F-201ENST00000308521 Q5W150 140 aa5.99□□□□□ -1.45
APOBEC3F-201ENST00000308521 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
APOBEC3F-201ENST00000308521 ROMO1P60602 79 aa5.94□□□□□ -1.46
APOBEC3F-201ENST00000308521 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
APOBEC3F-201ENST00000308521 SSBP3-AS1Q7Z2R9 100 aa5.92□□□□□ -1.46
APOBEC3F-201ENST00000308521 KRTAP13-2Q52LG2 175 aa5.91□□□□□ -1.46
APOBEC3F-201ENST00000308521 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.47
APOBEC3F-201ENST00000308521 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.47
APOBEC3F-201ENST00000308521 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
APOBEC3F-201ENST00000308521 HSPG2P98160 4391 aa5.88□□□□□ -1.47
APOBEC3F-201ENST00000308521 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
APOBEC3F-201ENST00000308521 KIAA1109Q2LD37 5005 aa5.86□□□□□ -1.47
APOBEC3F-201ENST00000308521 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
APOBEC3F-201ENST00000308521 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.47
APOBEC3F-201ENST00000308521 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
APOBEC3F-201ENST00000308521 FLG2Q5D862 2391 aaPredicted RBP5.82□□□□□ -1.48
APOBEC3F-201ENST00000308521 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
APOBEC3F-201ENST00000308521 RYR1P21817 5038 aa5.81□□□□□ -1.48
APOBEC3F-201ENST00000308521 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
APOBEC3F-201ENST00000308521 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
APOBEC3F-201ENST00000308521 A8MUU9 505 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms