RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 NBASA2RRP1 2371 aa1□□□□□ -2.25
CSN3-201ENST00000304954 COL6A5A8TX70 2615 aa1□□□□□ -2.25
CSN3-201ENST00000304954 CEP290O15078 2479 aa0.99□□□□□ -2.25
CSN3-201ENST00000304954 LRBAP50851 2863 aa0.99□□□□□ -2.25
CSN3-201ENST00000304954 NOTCH1P46531 2555 aa0.99□□□□□ -2.25
CSN3-201ENST00000304954 TNP1P09430 55 aa0.99□□□□□ -2.25
CSN3-201ENST00000304954 NBEAQ8NFP9 2946 aa0.99□□□□□ -2.25
CSN3-201ENST00000304954 EP300Q09472 2414 aaPredicted RBP0.99□□□□□ -2.25
CSN3-201ENST00000304954 NAV2Q8IVL1 2488 aa0.98□□□□□ -2.25
CSN3-201ENST00000304954 CEP350Q5VT06 3117 aa0.98□□□□□ -2.25
CSN3-201ENST00000304954 A0A096LPF7 62 aa0.98□□□□□ -2.25
CSN3-201ENST00000304954 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
CSN3-201ENST00000304954 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
CSN3-201ENST00000304954 NF1P21359 2839 aa0.98□□□□□ -2.25
CSN3-201ENST00000304954 PRUNE2Q8WUY3 3088 aa0.98□□□□□ -2.25
CSN3-201ENST00000304954 ATRQ13535 2644 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 EPG5Q9HCE0 2579 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 MAP1AP78559 2803 aaPredicted RBP0.97□□□□□ -2.25
CSN3-201ENST00000304954 ITPR1Q14643 2758 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 FRYQ5TBA9 3013 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 MAP1BP46821 2468 aaKnown RBP0.97□□□□□ -2.25
CSN3-201ENST00000304954 DCHS2Q6V1P9 2916 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 F8P00451 2351 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 DNAH12Q6ZR08 3092 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 APCP25054 2843 aa0.97□□□□□ -2.25
CSN3-201ENST00000304954 SETD2Q9BYW2 2564 aaPredicted RBP0.97□□□□□ -2.25
CSN3-201ENST00000304954 FBN2P35556 2912 aa0.96□□□□□ -2.26
CSN3-201ENST00000304954 FRYLO94915 3013 aa0.96□□□□□ -2.26
CSN3-201ENST00000304954 TENM4Q6N022 2769 aa0.96□□□□□ -2.26
CSN3-201ENST00000304954 DEFB133Q30KQ1 61 aa0.96□□□□□ -2.26
CSN3-201ENST00000304954 COL6A3P12111 3177 aa0.96□□□□□ -2.26
CSN3-201ENST00000304954 ANKHD1Q8IWZ3 2542 aaKnown RBP0.96□□□□□ -2.26
CSN3-201ENST00000304954 USP24Q9UPU5 2620 aa0.96□□□□□ -2.26
CSN3-201ENST00000304954 CFAP54Q96N23 3096 aa0.95□□□□□ -2.26
CSN3-201ENST00000304954 DEFB135Q30KP9 77 aa0.95□□□□□ -2.26
CSN3-201ENST00000304954 ITPR3Q14573 2671 aa0.95□□□□□ -2.26
CSN3-201ENST00000304954 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
CSN3-201ENST00000304954 RPS29P62273 56 aaKnown RBP0.94□□□□□ -2.26
CSN3-201ENST00000304954 NCOR2Q9Y618 2525 aa0.94□□□□□ -2.26
CSN3-201ENST00000304954 CCDC168Q8NDH2 2452 aa0.94□□□□□ -2.26
CSN3-201ENST00000304954 RIF1Q5UIP0 2472 aaKnown RBP0.93□□□□□ -2.26
CSN3-201ENST00000304954 FAM186AA6NE01 2351 aa0.93□□□□□ -2.26
CSN3-201ENST00000304954 TTC28Q96AY4 2481 aa0.93□□□□□ -2.26
CSN3-201ENST00000304954 CHD8Q9HCK8 2581 aa0.93□□□□□ -2.26
CSN3-201ENST00000304954 ZZEF1O43149 2961 aa0.92□□□□□ -2.26
CSN3-201ENST00000304954 USP9YO00507 2555 aaPredicted RBP0.92□□□□□ -2.26
CSN3-201ENST00000304954 TRIOO75962 3097 aa0.92□□□□□ -2.26
CSN3-201ENST00000304954 FLNCQ14315 2725 aa0.92□□□□□ -2.26
CSN3-201ENST00000304954 ATMQ13315 3056 aa0.92□□□□□ -2.26
CSN3-201ENST00000304954 HIVEP3Q5T1R4 2406 aa0.91□□□□□ -2.26
CSN3-201ENST00000304954 NIPBLQ6KC79 2804 aaeCLIP0.91□□□□□ -2.26
CSN3-201ENST00000304954 POLQO75417 2590 aa0.91□□□□□ -2.26
CSN3-201ENST00000304954 M0R2T5 61 aa0.91□□□□□ -2.26
CSN3-201ENST00000304954 UTP20O75691 2785 aaKnown RBP0.91□□□□□ -2.26
CSN3-201ENST00000304954 ACANP16112 2415 aa0.91□□□□□ -2.26
CSN3-201ENST00000304954 LRRK2Q5S007 2527 aa0.91□□□□□ -2.26
CSN3-201ENST00000304954 DMXL1Q9Y485 3027 aa0.9□□□□□ -2.27
CSN3-201ENST00000304954 COL12A1Q99715 3063 aa0.9□□□□□ -2.27
CSN3-201ENST00000304954 MKI67P46013 3256 aaKnown RBP0.9□□□□□ -2.27
CSN3-201ENST00000304954 SONP18583 2426 aaKnown RBP0.89□□□□□ -2.27
CSN3-201ENST00000304954 CFAP46Q8IYW2 2715 aa0.89□□□□□ -2.27
CSN3-201ENST00000304954 RANBP2P49792 3224 aaKnown RBP0.89□□□□□ -2.27
CSN3-201ENST00000304954 C5orf42Q9H799 3197 aa0.89□□□□□ -2.27
CSN3-201ENST00000304954 KRTAP2-3P0C7H8 128 aa0.89□□□□□ -2.27
CSN3-201ENST00000304954 KRTAP2-4Q9BYR9 128 aa0.89□□□□□ -2.27
CSN3-201ENST00000304954 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
CSN3-201ENST00000304954 PDZD2O15018 2839 aa0.89□□□□□ -2.27
CSN3-201ENST00000304954 KALRNO60229 2985 aa0.88□□□□□ -2.27
CSN3-201ENST00000304954 HTN3P15516 51 aa0.88□□□□□ -2.27
CSN3-201ENST00000304954 PKD1L1Q8TDX9 2849 aa0.88□□□□□ -2.27
CSN3-201ENST00000304954 DMXL2Q8TDJ6 3036 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 COL7A1Q02388 2944 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 HTTP42858 3142 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 CFAP47Q6ZTR5 3102 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 VPS13DQ5THJ4 4388 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 SPG11Q96JI7 2443 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 ZFHX4Q86UP3 3567 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 BOD1L1Q8NFC6 3051 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
CSN3-201ENST00000304954 SETXQ7Z333 2677 aaKnown RBP0.86□□□□□ -2.27
CSN3-201ENST00000304954 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
CSN3-201ENST00000304954 U3KQA8 63 aa0.86□□□□□ -2.27
CSN3-201ENST00000304954 ZANQ9Y493 2812 aa0.86□□□□□ -2.27
CSN3-201ENST00000304954 HRNRQ86YZ3 2850 aaPredicted RBP0.86□□□□□ -2.27
CSN3-201ENST00000304954 MTORP42345 2549 aa0.85□□□□□ -2.27
CSN3-201ENST00000304954 PIEZO1Q92508 2521 aa0.85□□□□□ -2.27
CSN3-201ENST00000304954 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
CSN3-201ENST00000304954 CELSR3Q9NYQ7 3312 aa0.85□□□□□ -2.27
CSN3-201ENST00000304954 TACC2O95359 2948 aa0.85□□□□□ -2.27
CSN3-201ENST00000304954 TEX15Q9BXT5 2789 aa0.85□□□□□ -2.27
CSN3-201ENST00000304954 GOLGB1Q14789 3259 aaKnown RBP0.85□□□□□ -2.27
CSN3-201ENST00000304954 NSD1Q96L73 2696 aaPredicted RBP0.85□□□□□ -2.27
CSN3-201ENST00000304954 PTPN13Q12923 2485 aa0.84□□□□□ -2.27
CSN3-201ENST00000304954 CSMD3Q7Z407 3707 aa0.84□□□□□ -2.27
CSN3-201ENST00000304954 ZNF469Q96JG9 3925 aaPredicted RBP0.84□□□□□ -2.27
CSN3-201ENST00000304954 SMR3AQ99954 134 aa0.84□□□□□ -2.27
CSN3-201ENST00000304954 MXRA5Q9NR99 2828 aa0.84□□□□□ -2.28
CSN3-201ENST00000304954 WDFY4Q6ZS81 3184 aa0.84□□□□□ -2.28
CSN3-201ENST00000304954 SRCAPQ6ZRS2 3230 aa0.84□□□□□ -2.28
CSN3-201ENST00000304954 PCNTO95613 3336 aa0.84□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms