RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 LOC110117498A0A087WWA1 95 aa5.72□□□□□ -1.49
CLCC1-201ENST00000302500 SCGB1C2P0DMR2 95 aa5.72□□□□□ -1.49
CLCC1-201ENST00000302500 LINC00313P59037 77 aa5.72□□□□□ -1.49
CLCC1-201ENST00000302500 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
CLCC1-201ENST00000302500 HRES1P13985 223 aa5.7□□□□□ -1.5
CLCC1-201ENST00000302500 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
CLCC1-201ENST00000302500 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
CLCC1-201ENST00000302500 DSCR8Q96T75 97 aa5.69□□□□□ -1.5
CLCC1-201ENST00000302500 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
CLCC1-201ENST00000302500 C9JAW5 83 aa5.68□□□□□ -1.5
CLCC1-201ENST00000302500 TAX1BP3O14907 124 aa5.68□□□□□ -1.5
CLCC1-201ENST00000302500 A0A1B0GW54 56 aa5.67□□□□□ -1.5
CLCC1-201ENST00000302500 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
CLCC1-201ENST00000302500 TSTD3H0UI37 97 aa5.66□□□□□ -1.5
CLCC1-201ENST00000302500 JMJD7-PLA2G4BH0Y9G9 81 aa5.66□□□□□ -1.5
CLCC1-201ENST00000302500 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
CLCC1-201ENST00000302500 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
CLCC1-201ENST00000302500 TRBV20-1A0A075B6N2 111 aa5.65□□□□□ -1.51
CLCC1-201ENST00000302500 C8orf87E5RJ46 101 aa5.65□□□□□ -1.51
CLCC1-201ENST00000302500 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.51
CLCC1-201ENST00000302500 VPS25Q9BRG1 176 aa5.64□□□□□ -1.51
CLCC1-201ENST00000302500 C14orf132Q9NPU4 83 aa5.64□□□□□ -1.51
CLCC1-201ENST00000302500 IGKV3D-7A0A0C4DH55 119 aa5.63□□□□□ -1.51
CLCC1-201ENST00000302500 J3KT08 172 aa5.63□□□□□ -1.51
CLCC1-201ENST00000302500 A0A1W2PPM0 123 aa5.62□□□□□ -1.51
CLCC1-201ENST00000302500 A8MWP4 228 aa5.61□□□□□ -1.51
CLCC1-201ENST00000302500 PDE6GP18545 87 aa5.61□□□□□ -1.51
CLCC1-201ENST00000302500 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
CLCC1-201ENST00000302500 USH2AO75445 5202 aa5.61□□□□□ -1.51
CLCC1-201ENST00000302500 H3BT86 120 aa5.6□□□□□ -1.51
CLCC1-201ENST00000302500 M0R2T5 61 aa5.6□□□□□ -1.51
CLCC1-201ENST00000302500 KRTAP4-12Q9BQ66 201 aa5.6□□□□□ -1.51
CLCC1-201ENST00000302500 LYRM7Q5U5X0 104 aa5.59□□□□□ -1.51
CLCC1-201ENST00000302500 ZCCHC13Q8WW36 166 aaKnown RBP5.59□□□□□ -1.51
CLCC1-201ENST00000302500 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
CLCC1-201ENST00000302500 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
CLCC1-201ENST00000302500 BATFQ16520 125 aa5.58□□□□□ -1.52
CLCC1-201ENST00000302500 PRR15Q8IV56 129 aa5.57□□□□□ -1.52
CLCC1-201ENST00000302500 MTURNQ8N3F0 131 aa5.57□□□□□ -1.52
CLCC1-201ENST00000302500 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
CLCC1-201ENST00000302500 MT2AP02795 61 aa5.56□□□□□ -1.52
CLCC1-201ENST00000302500 PRO0461Q9UI25 63 aa5.56□□□□□ -1.52
CLCC1-201ENST00000302500 MT1FP04733 61 aa5.53□□□□□ -1.52
CLCC1-201ENST00000302500 SPINK7P58062 85 aa5.53□□□□□ -1.52
CLCC1-201ENST00000302500 K7EQZ3 153 aa5.52□□□□□ -1.53
CLCC1-201ENST00000302500 Q6ZVQ6 151 aa5.52□□□□□ -1.53
CLCC1-201ENST00000302500 NDUFB1O75438 58 aa5.51□□□□□ -1.53
CLCC1-201ENST00000302500 NREPQ16612 68 aa5.5□□□□□ -1.53
CLCC1-201ENST00000302500 TMEM254Q8TBM7 123 aa5.5□□□□□ -1.53
CLCC1-201ENST00000302500 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
CLCC1-201ENST00000302500 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
CLCC1-201ENST00000302500 SPCS1Q9Y6A9 102 aa5.49□□□□□ -1.53
CLCC1-201ENST00000302500 MRPL34Q9BQ48 92 aaKnown RBP5.48□□□□□ -1.53
CLCC1-201ENST00000302500 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
CLCC1-201ENST00000302500 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
CLCC1-201ENST00000302500 Q5W150 140 aa5.46□□□□□ -1.54
CLCC1-201ENST00000302500 K7EP34 96 aa5.45□□□□□ -1.54
CLCC1-201ENST00000302500 COL5A1-AS1Q5SY13 56 aa5.45□□□□□ -1.54
CLCC1-201ENST00000302500 hDV103S1A0JD37 113 aa5.44□□□□□ -1.54
CLCC1-201ENST00000302500 Q8N9L7 120 aa5.44□□□□□ -1.54
CLCC1-201ENST00000302500 LINC00846Q9NV44 126 aa5.44□□□□□ -1.54
CLCC1-201ENST00000302500 FAM236DA0A1B0GTK5 79 aa5.43□□□□□ -1.54
CLCC1-201ENST00000302500 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
CLCC1-201ENST00000302500 FAM236CP0DP71 79 aa5.43□□□□□ -1.54
CLCC1-201ENST00000302500 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
CLCC1-201ENST00000302500 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
CLCC1-201ENST00000302500 BPY2O14599 106 aa5.41□□□□□ -1.54
CLCC1-201ENST00000302500 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
CLCC1-201ENST00000302500 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
CLCC1-201ENST00000302500 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
CLCC1-201ENST00000302500 HCG22E2RYF7 251 aa5.32□□□□□ -1.56
CLCC1-201ENST00000302500 F8W1H4 67 aa5.32□□□□□ -1.56
CLCC1-201ENST00000302500 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
CLCC1-201ENST00000302500 C7orf65Q6ZTY9 151 aa5.31□□□□□ -1.56
CLCC1-201ENST00000302500 NDUFS5O43920 106 aa5.3□□□□□ -1.56
CLCC1-201ENST00000302500 CXCL6P80162 114 aa5.3□□□□□ -1.56
CLCC1-201ENST00000302500 ETDBQ3ZM63 59 aa5.3□□□□□ -1.56
CLCC1-201ENST00000302500 UBL5Q9BZL1 73 aa5.3□□□□□ -1.56
CLCC1-201ENST00000302500 IGKV2D-30A0A075B6S6 120 aa5.28□□□□□ -1.56
CLCC1-201ENST00000302500 IGKV2-30P06310 120 aa5.28□□□□□ -1.56
CLCC1-201ENST00000302500 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
CLCC1-201ENST00000302500 GTF2H5Q6ZYL4 71 aa5.28□□□□□ -1.56
CLCC1-201ENST00000302500 PCP4L1A6NKN8 68 aa5.27□□□□□ -1.57
CLCC1-201ENST00000302500 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
CLCC1-201ENST00000302500 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
CLCC1-201ENST00000302500 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
CLCC1-201ENST00000302500 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
CLCC1-201ENST00000302500 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
CLCC1-201ENST00000302500 C4orf26Q17RF5 130 aa5.25□□□□□ -1.57
CLCC1-201ENST00000302500 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
CLCC1-201ENST00000302500 FAM240AA0A1B0GVK7 77 aa5.2□□□□□ -1.58
CLCC1-201ENST00000302500 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
CLCC1-201ENST00000302500 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
CLCC1-201ENST00000302500 ACYP1P07311 99 aa5.15□□□□□ -1.59
CLCC1-201ENST00000302500 LCA10Q71F78 164 aa5.15□□□□□ -1.59
CLCC1-201ENST00000302500 CYP4F30PQ9H0H9 118 aa5.15□□□□□ -1.59
CLCC1-201ENST00000302500 C1orf64Q8NEQ6 169 aa5.14□□□□□ -1.59
CLCC1-201ENST00000302500 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
CLCC1-201ENST00000302500 A0A087WVE0 104 aa5.12□□□□□ -1.59
CLCC1-201ENST00000302500 MT1BP07438 61 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms