RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 RYR1P21817 5038 aa14.79□□□□□ -0.04
SDCCAG3-201ENST00000298537 EPPK1P58107 5090 aaKnown RBP14.78□□□□□ -0.04
SDCCAG3-201ENST00000298537 NDUFB1O75438 58 aa14.77□□□□□ -0.04
SDCCAG3-201ENST00000298537 A0A1B0GVX0 72 aa14.74□□□□□ -0.05
SDCCAG3-201ENST00000298537 H7BZZ5 65 aa14.74□□□□□ -0.05
SDCCAG3-201ENST00000298537 SERP1Q9Y6X1 66 aa14.74□□□□□ -0.05
SDCCAG3-201ENST00000298537 KIAA1109Q2LD37 5005 aa14.73□□□□□ -0.05
SDCCAG3-201ENST00000298537 KRTAP17-1Q9BYP8 105 aa14.72□□□□□ -0.05
SDCCAG3-201ENST00000298537 C8orf17Q9NRJ1 99 aa14.71□□□□□ -0.05
SDCCAG3-201ENST00000298537 PRO0628Q9UI54 55 aa14.71□□□□□ -0.05
SDCCAG3-201ENST00000298537 PKHD1L1Q86WI1 4243 aa14.7□□□□□ -0.06
SDCCAG3-201ENST00000298537 CDK2AP2O75956 126 aa14.7□□□□□ -0.06
SDCCAG3-201ENST00000298537 hDV103S1A0JD37 113 aa14.69□□□□□ -0.06
SDCCAG3-201ENST00000298537 C1orf195Q5TG92 126 aa14.69□□□□□ -0.06
SDCCAG3-201ENST00000298537 TMEM254Q8TBM7 123 aa14.69□□□□□ -0.06
SDCCAG3-201ENST00000298537 LRP1Q07954 4544 aaKnown RBP14.67□□□□□ -0.06
SDCCAG3-201ENST00000298537 ASB16-AS1Q495Z4 193 aa14.67□□□□□ -0.06
SDCCAG3-201ENST00000298537 KLKP1Q107X0 134 aa14.65□□□□□ -0.06
SDCCAG3-201ENST00000298537 C4orf48Q5BLP8 95 aa14.63□□□□□ -0.07
SDCCAG3-201ENST00000298537 FP248Q71RG6 208 aaPredicted RBP14.62□□□□□ -0.07
SDCCAG3-201ENST00000298537 A0A0U1RQV1 116 aa14.61□□□□□ -0.07
SDCCAG3-201ENST00000298537 LINC00304Q8N9R0 145 aa14.6□□□□□ -0.07
SDCCAG3-201ENST00000298537 Q5VSD8 79 aa14.59□□□□□ -0.07
SDCCAG3-201ENST00000298537 FAM229AH3BQW9 127 aa14.58□□□□□ -0.08
SDCCAG3-201ENST00000298537 SPINK1P00995 79 aa14.57□□□□□ -0.08
SDCCAG3-201ENST00000298537 SMIM26A0A096LP01 95 aa14.56□□□□□ -0.08
SDCCAG3-201ENST00000298537 LIMD2Q9BT23 127 aa14.56□□□□□ -0.08
SDCCAG3-201ENST00000298537 MRPL34Q9BQ48 92 aaKnown RBP14.51□□□□□ -0.09
SDCCAG3-201ENST00000298537 TNXBP22105 4242 aa14.51□□□□□ -0.09
SDCCAG3-201ENST00000298537 NDUFS5O43920 106 aa14.5□□□□□ -0.09
SDCCAG3-201ENST00000298537 ZCCHC13Q8WW36 166 aaKnown RBP14.47□□□□□ -0.09
SDCCAG3-201ENST00000298537 H0Y9P7 68 aa14.46□□□□□ -0.1
SDCCAG3-201ENST00000298537 FLG2Q5D862 2391 aaPredicted RBP14.43□□□□□ -0.1
SDCCAG3-201ENST00000298537 LINC00208Q96KT6 92 aa14.43□□□□□ -0.1
SDCCAG3-201ENST00000298537 LINC00313P59037 77 aa14.43□□□□□ -0.1
SDCCAG3-201ENST00000298537 FAT3Q8TDW7 4589 aa14.42□□□□□ -0.1
SDCCAG3-201ENST00000298537 MYCBP2O75592 4640 aa14.42□□□□□ -0.1
SDCCAG3-201ENST00000298537 SPAG11AQ6PDA7 123 aa14.41□□□□□ -0.1
SDCCAG3-201ENST00000298537 NDUFC1O43677 76 aa14.41□□□□□ -0.1
SDCCAG3-201ENST00000298537 MP68P56378 58 aa14.39□□□□□ -0.11
SDCCAG3-201ENST00000298537 C8orf87E5RJ46 101 aa14.38□□□□□ -0.11
SDCCAG3-201ENST00000298537 TRAV22A0A0B4J277 110 aa14.38□□□□□ -0.11
SDCCAG3-201ENST00000298537 ATP5EP56381 51 aaPredicted RBP14.38□□□□□ -0.11
SDCCAG3-201ENST00000298537 RPS29P62273 56 aaKnown RBP14.37□□□□□ -0.11
SDCCAG3-201ENST00000298537 RETNLBQ9BQ08 111 aa14.36□□□□□ -0.11
SDCCAG3-201ENST00000298537 KRTAP16-1A8MUX0 517 aa14.35□□□□□ -0.11
SDCCAG3-201ENST00000298537 Q8N1X5 172 aa14.35□□□□□ -0.11
SDCCAG3-201ENST00000298537 BRK1Q8WUW1 75 aa14.35□□□□□ -0.11
SDCCAG3-201ENST00000298537 Q5W150 140 aa14.34□□□□□ -0.11
SDCCAG3-201ENST00000298537 TP53AIP1Q9HCN2 124 aa14.33□□□□□ -0.11
SDCCAG3-201ENST00000298537 C1orf64Q8NEQ6 169 aa14.32□□□□□ -0.12
SDCCAG3-201ENST00000298537 KRTAP10-8P60410 259 aa14.29□□□□□ -0.12
SDCCAG3-201ENST00000298537 Q8N9P0 234 aaPredicted RBP14.26□□□□□ -0.13
SDCCAG3-201ENST00000298537 MPLKIPQ8TAP9 179 aa14.24□□□□□ -0.13
SDCCAG3-201ENST00000298537 KRTAP13-3Q3SY46 172 aa14.23□□□□□ -0.13
SDCCAG3-201ENST00000298537 PRR4Q16378 134 aa14.23□□□□□ -0.13
SDCCAG3-201ENST00000298537 H3BPC8 53 aa14.2□□□□□ -0.14
SDCCAG3-201ENST00000298537 C9orf92A6NGG3 77 aa14.19□□□□□ -0.14
SDCCAG3-201ENST00000298537 V9GYY9 64 aa14.19□□□□□ -0.14
SDCCAG3-201ENST00000298537 DMBT1Q9UGM3 2413 aaPredicted RBP14.19□□□□□ -0.14
SDCCAG3-201ENST00000298537 PCOTHQ58A44 107 aa14.18□□□□□ -0.14
SDCCAG3-201ENST00000298537 KRTAP4-5Q9BYR2 181 aa14.17□□□□□ -0.14
SDCCAG3-201ENST00000298537 SEC61GP60059 68 aa14.15□□□□□ -0.14
SDCCAG3-201ENST00000298537 MT1HL1P0DM35 61 aa14.11□□□□□ -0.15
SDCCAG3-201ENST00000298537 ABCA13Q86UQ4 5058 aa14.01□□□□□ -0.17
SDCCAG3-201ENST00000298537 CYP4F30PQ9H0H9 118 aa14□□□□□ -0.17
SDCCAG3-201ENST00000298537 LOC101927531A0A1B0GV80 90 aa13.99□□□□□ -0.17
SDCCAG3-201ENST00000298537 SPANXA2-OT1Q8N9U9 137 aa13.94□□□□□ -0.18
SDCCAG3-201ENST00000298537 Q1T7F1 81 aa13.92□□□□□ -0.18
SDCCAG3-201ENST00000298537 BIRC6Q9NR09 4857 aa13.91□□□□□ -0.18
SDCCAG3-201ENST00000298537 IGLV7-46A0A075B6I9 117 aa13.91□□□□□ -0.18
SDCCAG3-201ENST00000298537 IGKV2-30P06310 120 aa13.91□□□□□ -0.18
SDCCAG3-201ENST00000298537 IGKV2D-30A0A075B6S6 120 aa13.9□□□□□ -0.18
SDCCAG3-201ENST00000298537 C20orf166-AS1Q96NR2 134 aa13.9□□□□□ -0.18
SDCCAG3-201ENST00000298537 A8MUU9 505 aa13.89□□□□□ -0.19
SDCCAG3-201ENST00000298537 PMAIP1Q13794 54 aa13.87□□□□□ -0.19
SDCCAG3-201ENST00000298537 HRES1P13985 223 aa13.83□□□□□ -0.2
SDCCAG3-201ENST00000298537 HERC2O95714 4834 aa13.83□□□□□ -0.2
SDCCAG3-201ENST00000298537 PSPHP1O15172 72 aa13.79□□□□□ -0.2
SDCCAG3-201ENST00000298537 Q75L30 129 aa13.7□□□□□ -0.22
SDCCAG3-201ENST00000298537 COA5Q86WW8 74 aa13.69□□□□□ -0.22
SDCCAG3-201ENST00000298537 LPAP08519 4548 aa13.68□□□□□ -0.22
SDCCAG3-201ENST00000298537 XP32Q5T750 250 aa13.67□□□□□ -0.22
SDCCAG3-201ENST00000298537 C7orf65Q6ZTY9 151 aa13.66□□□□□ -0.22
SDCCAG3-201ENST00000298537 A8MUN3 132 aa13.65□□□□□ -0.22
SDCCAG3-201ENST00000298537 A8MU10 97 aa13.64□□□□□ -0.23
SDCCAG3-201ENST00000298537 Q5VV11 94 aa13.6□□□□□ -0.23
SDCCAG3-201ENST00000298537 LRP2P98164 4655 aa13.6□□□□□ -0.23
SDCCAG3-201ENST00000298537 DMAC1Q96GE9 116 aa13.58□□□□□ -0.24
SDCCAG3-201ENST00000298537 SPINK7P58062 85 aa13.57□□□□□ -0.24
SDCCAG3-201ENST00000298537 RPL37P61927 97 aaKnown RBP13.56□□□□□ -0.24
SDCCAG3-201ENST00000298537 ATP11AUNQ6ZP68 121 aa13.51□□□□□ -0.25
SDCCAG3-201ENST00000298537 ACYP2P14621 99 aa13.48□□□□□ -0.25
SDCCAG3-201ENST00000298537 J3QL48 77 aa13.46□□□□□ -0.25
SDCCAG3-201ENST00000298537 PCLOQ9Y6V0 5065 aa13.44□□□□□ -0.26
SDCCAG3-201ENST00000298537 CHKB-CPT1BH3BT56 60 aa13.43□□□□□ -0.26
SDCCAG3-201ENST00000298537 TPRXLQ17RH7 258 aa13.41□□□□□ -0.26
SDCCAG3-201ENST00000298537 KTN1-AS1Q86SY8 53 aa13.41□□□□□ -0.26
SDCCAG3-201ENST00000298537 KRTAP3-1Q9BYR8 98 aa13.4□□□□□ -0.26
SDCCAG3-201ENST00000298537 PRR15LQ9BU68 103 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms