RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 DNAH8Q96JB1 4490 aa8.12□□□□□ -1.11
KCNIP3-201ENST00000295225 SPINK7P58062 85 aa8.11□□□□□ -1.11
KCNIP3-201ENST00000295225 SPANXA2-OT1Q8N9U9 137 aa8.11□□□□□ -1.11
KCNIP3-201ENST00000295225 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
KCNIP3-201ENST00000295225 DNAH17Q9UFH2 4485 aa8.1□□□□□ -1.11
KCNIP3-201ENST00000295225 Q6ZR54 194 aa8.1□□□□□ -1.11
KCNIP3-201ENST00000295225 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
KCNIP3-201ENST00000295225 VPS13DQ5THJ4 4388 aa8.1□□□□□ -1.11
KCNIP3-201ENST00000295225 PLAC8Q9NZF1 115 aa8.1□□□□□ -1.11
KCNIP3-201ENST00000295225 CNBPP62633 177 aaKnown RBP8.09□□□□□ -1.11
KCNIP3-201ENST00000295225 DNAH6Q9C0G6 4158 aa8.09□□□□□ -1.11
KCNIP3-201ENST00000295225 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
KCNIP3-201ENST00000295225 SPAG11AQ6PDA7 123 aa8.07□□□□□ -1.12
KCNIP3-201ENST00000295225 DNHD1Q96M86 4753 aa8.06□□□□□ -1.12
KCNIP3-201ENST00000295225 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
KCNIP3-201ENST00000295225 H0Y9P7 68 aa8.05□□□□□ -1.12
KCNIP3-201ENST00000295225 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
KCNIP3-201ENST00000295225 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
KCNIP3-201ENST00000295225 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.12
KCNIP3-201ENST00000295225 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
KCNIP3-201ENST00000295225 DYNC2H1Q8NCM8 4307 aaKnown RBP8.01□□□□□ -1.13
KCNIP3-201ENST00000295225 IGLV8-61A0A075B6I0 122 aa8□□□□□ -1.13
KCNIP3-201ENST00000295225 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
KCNIP3-201ENST00000295225 A8MWP4 228 aa7.99□□□□□ -1.13
KCNIP3-201ENST00000295225 P0C880 135 aa7.99□□□□□ -1.13
KCNIP3-201ENST00000295225 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
KCNIP3-201ENST00000295225 COA5Q86WW8 74 aa7.98□□□□□ -1.13
KCNIP3-201ENST00000295225 DNAH11Q96DT5 4516 aa7.97□□□□□ -1.13
KCNIP3-201ENST00000295225 C14orf177Q52M58 125 aa7.96□□□□□ -1.14
KCNIP3-201ENST00000295225 MMP24-AS1A0A0U1RRL7 71 aa7.96□□□□□ -1.14
KCNIP3-201ENST00000295225 PSORS1C2Q9UIG4 136 aa7.96□□□□□ -1.14
KCNIP3-201ENST00000295225 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
KCNIP3-201ENST00000295225 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
KCNIP3-201ENST00000295225 Q96NJ1 140 aa7.93□□□□□ -1.14
KCNIP3-201ENST00000295225 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
KCNIP3-201ENST00000295225 SPRR1BP22528 89 aa7.92□□□□□ -1.14
KCNIP3-201ENST00000295225 A0A087WTM6 91 aa7.91□□□□□ -1.14
KCNIP3-201ENST00000295225 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
KCNIP3-201ENST00000295225 ALMS1Q8TCU4 4167 aa7.9□□□□□ -1.14
KCNIP3-201ENST00000295225 C8orf17Q9NRJ1 99 aa7.9□□□□□ -1.15
KCNIP3-201ENST00000295225 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
KCNIP3-201ENST00000295225 CIRBP-AS1Q8TBR5 109 aa7.88□□□□□ -1.15
KCNIP3-201ENST00000295225 H3BPC8 53 aa7.87□□□□□ -1.15
KCNIP3-201ENST00000295225 WWC2-AS2Q96NR7 200 aa7.87□□□□□ -1.15
KCNIP3-201ENST00000295225 LRP1BQ9NZR2 4599 aa7.86□□□□□ -1.15
KCNIP3-201ENST00000295225 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
KCNIP3-201ENST00000295225 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
KCNIP3-201ENST00000295225 LY6G6CO95867 125 aa7.84□□□□□ -1.15
KCNIP3-201ENST00000295225 IGLV5-52A0A0A0MRZ9 124 aa7.83□□□□□ -1.16
KCNIP3-201ENST00000295225 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
KCNIP3-201ENST00000295225 FAT2Q9NYQ8 4349 aa7.82□□□□□ -1.16
KCNIP3-201ENST00000295225 C20orf166-AS1Q96NR2 134 aa7.82□□□□□ -1.16
KCNIP3-201ENST00000295225 K7ERS5 55 aa7.81□□□□□ -1.16
KCNIP3-201ENST00000295225 Q5W150 140 aa7.8□□□□□ -1.16
KCNIP3-201ENST00000295225 SPATA8Q6RVD6 105 aa7.8□□□□□ -1.16
KCNIP3-201ENST00000295225 A0A1B0GVX0 72 aa7.79□□□□□ -1.16
KCNIP3-201ENST00000295225 ZNF861PO60384 105 aa7.79□□□□□ -1.16
KCNIP3-201ENST00000295225 IGLV7-46A0A075B6I9 117 aa7.78□□□□□ -1.16
KCNIP3-201ENST00000295225 KRTAP10-2P60368 255 aa7.77□□□□□ -1.17
KCNIP3-201ENST00000295225 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
KCNIP3-201ENST00000295225 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
KCNIP3-201ENST00000295225 VPS13BQ7Z7G8 4022 aa7.75□□□□□ -1.17
KCNIP3-201ENST00000295225 PKHD1P08F94 4074 aa7.72□□□□□ -1.17
KCNIP3-201ENST00000295225 HRES1P13985 223 aa7.71□□□□□ -1.18
KCNIP3-201ENST00000295225 IGLV7-43P04211 117 aa7.71□□□□□ -1.18
KCNIP3-201ENST00000295225 UQCR11O14957 56 aa7.67□□□□□ -1.18
KCNIP3-201ENST00000295225 TP53AIP1Q9HCN2 124 aa7.66□□□□□ -1.18
KCNIP3-201ENST00000295225 PKD1P98161 4303 aa7.66□□□□□ -1.18
KCNIP3-201ENST00000295225 A8MUU9 505 aa7.65□□□□□ -1.19
KCNIP3-201ENST00000295225 KRTAP13-2Q52LG2 175 aa7.62□□□□□ -1.19
KCNIP3-201ENST00000295225 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
KCNIP3-201ENST00000295225 KRTAP10-1P60331 282 aa7.61□□□□□ -1.19
KCNIP3-201ENST00000295225 FAT1Q14517 4588 aa7.58□□□□□ -1.2
KCNIP3-201ENST00000295225 IGKV2D-30A0A075B6S6 120 aa7.56□□□□□ -1.2
KCNIP3-201ENST00000295225 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
KCNIP3-201ENST00000295225 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
KCNIP3-201ENST00000295225 A0A1B0GU69 56 aa7.54□□□□□ -1.2
KCNIP3-201ENST00000295225 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
KCNIP3-201ENST00000295225 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
KCNIP3-201ENST00000295225 SPINK1P00995 79 aa7.48□□□□□ -1.21
KCNIP3-201ENST00000295225 SSBP3-AS1Q7Z2R9 100 aa7.48□□□□□ -1.21
KCNIP3-201ENST00000295225 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
KCNIP3-201ENST00000295225 ACYP2P14621 99 aa7.44□□□□□ -1.22
KCNIP3-201ENST00000295225 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
KCNIP3-201ENST00000295225 Q8N1X5 172 aa7.44□□□□□ -1.22
KCNIP3-201ENST00000295225 SACSQ9NZJ4 4579 aa7.43□□□□□ -1.22
KCNIP3-201ENST00000295225 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
KCNIP3-201ENST00000295225 C9orf92A6NGG3 77 aa7.4□□□□□ -1.22
KCNIP3-201ENST00000295225 FAM229AH3BQW9 127 aa7.4□□□□□ -1.22
KCNIP3-201ENST00000295225 DYNC1H1Q14204 4646 aaKnown RBP7.4□□□□□ -1.23
KCNIP3-201ENST00000295225 Q6ZSA8 131 aa7.38□□□□□ -1.23
KCNIP3-201ENST00000295225 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
KCNIP3-201ENST00000295225 MYCBP2O75592 4640 aa7.33□□□□□ -1.24
KCNIP3-201ENST00000295225 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
KCNIP3-201ENST00000295225 KMT2CQ8NEZ4 4911 aaKnown RBP7.32□□□□□ -1.24
KCNIP3-201ENST00000295225 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
KCNIP3-201ENST00000295225 FLG2Q5D862 2391 aaPredicted RBP7.27□□□□□ -1.25
KCNIP3-201ENST00000295225 APOBP04114 4563 aaKnown RBP7.25□□□□□ -1.25
KCNIP3-201ENST00000295225 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
KCNIP3-201ENST00000295225 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms