RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 TMEM258P61165 79 aa10.97□□□□□ -0.65
VBP1-201ENST00000286428 KMT2CQ8NEZ4 4911 aaKnown RBP10.96□□□□□ -0.65
VBP1-201ENST00000286428 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
VBP1-201ENST00000286428 TP53AIP1Q9HCN2 124 aa10.95□□□□□ -0.66
VBP1-201ENST00000286428 MP68P56378 58 aa10.94□□□□□ -0.66
VBP1-201ENST00000286428 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
VBP1-201ENST00000286428 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
VBP1-201ENST00000286428 SNURFQ9Y675 71 aa10.92□□□□□ -0.66
VBP1-201ENST00000286428 A0A0U1RQV1 116 aa10.92□□□□□ -0.66
VBP1-201ENST00000286428 C1orf195Q5TG92 126 aa10.92□□□□□ -0.66
VBP1-201ENST00000286428 MRPL34Q9BQ48 92 aaKnown RBP10.91□□□□□ -0.66
VBP1-201ENST00000286428 H3BPC8 53 aa10.9□□□□□ -0.66
VBP1-201ENST00000286428 APOBP04114 4563 aaKnown RBP10.89□□□□□ -0.67
VBP1-201ENST00000286428 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
VBP1-201ENST00000286428 H7BZZ5 65 aa10.87□□□□□ -0.67
VBP1-201ENST00000286428 LINC00313P59037 77 aa10.85□□□□□ -0.67
VBP1-201ENST00000286428 NDUFS5O43920 106 aa10.83□□□□□ -0.68
VBP1-201ENST00000286428 RPS28P62857 69 aaKnown RBP10.82□□□□□ -0.68
VBP1-201ENST00000286428 Q5VSD8 79 aa10.82□□□□□ -0.68
VBP1-201ENST00000286428 TRAV22A0A0B4J277 110 aa10.82□□□□□ -0.68
VBP1-201ENST00000286428 H0Y9P7 68 aa10.81□□□□□ -0.68
VBP1-201ENST00000286428 ATP5EP56381 51 aaPredicted RBP10.81□□□□□ -0.68
VBP1-201ENST00000286428 FAM236DA0A1B0GTK5 79 aa10.79□□□□□ -0.68
VBP1-201ENST00000286428 FAM236CP0DP71 79 aa10.79□□□□□ -0.68
VBP1-201ENST00000286428 ZCCHC13Q8WW36 166 aaKnown RBP10.79□□□□□ -0.68
VBP1-201ENST00000286428 NOTCH2NLQ7Z3S9 236 aa10.78□□□□□ -0.68
VBP1-201ENST00000286428 LINC00208Q96KT6 92 aa10.76□□□□□ -0.69
VBP1-201ENST00000286428 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
VBP1-201ENST00000286428 FAT1Q14517 4588 aa10.72□□□□□ -0.69
VBP1-201ENST00000286428 Q8N9P0 234 aaPredicted RBP10.7□□□□□ -0.7
VBP1-201ENST00000286428 RYR3Q15413 4870 aa10.68□□□□□ -0.7
VBP1-201ENST00000286428 Q8N1X5 172 aa10.67□□□□□ -0.7
VBP1-201ENST00000286428 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
VBP1-201ENST00000286428 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
VBP1-201ENST00000286428 LOC101927531A0A1B0GV80 90 aa10.62□□□□□ -0.71
VBP1-201ENST00000286428 KRTAP16-1A8MUX0 517 aa10.62□□□□□ -0.71
VBP1-201ENST00000286428 PKHD1L1Q86WI1 4243 aa10.61□□□□□ -0.71
VBP1-201ENST00000286428 HSPG2P98160 4391 aa10.6□□□□□ -0.71
VBP1-201ENST00000286428 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
VBP1-201ENST00000286428 KRTAP13-3Q3SY46 172 aa10.53□□□□□ -0.72
VBP1-201ENST00000286428 CYP4F30PQ9H0H9 118 aa10.53□□□□□ -0.72
VBP1-201ENST00000286428 Q5W150 140 aa10.53□□□□□ -0.72
VBP1-201ENST00000286428 RYR1P21817 5038 aa10.52□□□□□ -0.73
VBP1-201ENST00000286428 FP248Q71RG6 208 aaPredicted RBP10.5□□□□□ -0.73
VBP1-201ENST00000286428 IGLV7-46A0A075B6I9 117 aa10.48□□□□□ -0.73
VBP1-201ENST00000286428 OXTP01178 125 aa10.47□□□□□ -0.73
VBP1-201ENST00000286428 PCOTHQ58A44 107 aa10.47□□□□□ -0.73
VBP1-201ENST00000286428 RETNLBQ9BQ08 111 aa10.46□□□□□ -0.74
VBP1-201ENST00000286428 C20orf166-AS1Q96NR2 134 aa10.44□□□□□ -0.74
VBP1-201ENST00000286428 C9orf92A6NGG3 77 aa10.42□□□□□ -0.74
VBP1-201ENST00000286428 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
VBP1-201ENST00000286428 A8MUU9 505 aa10.41□□□□□ -0.74
VBP1-201ENST00000286428 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
VBP1-201ENST00000286428 PRR4Q16378 134 aa10.4□□□□□ -0.74
VBP1-201ENST00000286428 SMIM26A0A096LP01 95 aa10.39□□□□□ -0.75
VBP1-201ENST00000286428 TNXBP22105 4242 aa10.37□□□□□ -0.75
VBP1-201ENST00000286428 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
VBP1-201ENST00000286428 FLG2Q5D862 2391 aaPredicted RBP10.35□□□□□ -0.75
VBP1-201ENST00000286428 Q75L30 129 aa10.34□□□□□ -0.75
VBP1-201ENST00000286428 KIAA1109Q2LD37 5005 aa10.32□□□□□ -0.76
VBP1-201ENST00000286428 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
VBP1-201ENST00000286428 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
VBP1-201ENST00000286428 EPPK1P58107 5090 aaKnown RBP10.29□□□□□ -0.76
VBP1-201ENST00000286428 HRES1P13985 223 aa10.29□□□□□ -0.76
VBP1-201ENST00000286428 C4orf26Q17RF5 130 aa10.29□□□□□ -0.76
VBP1-201ENST00000286428 LRP1Q07954 4544 aaKnown RBP10.27□□□□□ -0.76
VBP1-201ENST00000286428 FAT3Q8TDW7 4589 aa10.27□□□□□ -0.77
VBP1-201ENST00000286428 ACYP2P14621 99 aa10.25□□□□□ -0.77
VBP1-201ENST00000286428 ATP11AUNQ6ZP68 121 aa10.22□□□□□ -0.77
VBP1-201ENST00000286428 COA5Q86WW8 74 aa10.22□□□□□ -0.77
VBP1-201ENST00000286428 DMAC1Q96GE9 116 aa10.21□□□□□ -0.78
VBP1-201ENST00000286428 V9GYY9 64 aa10.18□□□□□ -0.78
VBP1-201ENST00000286428 RPL37P61927 97 aaKnown RBP10.17□□□□□ -0.78
VBP1-201ENST00000286428 KRTAP4-5Q9BYR2 181 aa10.16□□□□□ -0.78
VBP1-201ENST00000286428 PRO0628Q9UI54 55 aa10.16□□□□□ -0.78
VBP1-201ENST00000286428 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
VBP1-201ENST00000286428 A8MUN3 132 aa10.14□□□□□ -0.79
VBP1-201ENST00000286428 XP32Q5T750 250 aa10.14□□□□□ -0.79
VBP1-201ENST00000286428 TPRXLQ17RH7 258 aa10.12□□□□□ -0.79
VBP1-201ENST00000286428 Q1T7F1 81 aa10.12□□□□□ -0.79
VBP1-201ENST00000286428 SPINK7P58062 85 aa10.12□□□□□ -0.79
VBP1-201ENST00000286428 J3QL48 77 aa10.11□□□□□ -0.79
VBP1-201ENST00000286428 MPLKIPQ8TAP9 179 aa10.1□□□□□ -0.79
VBP1-201ENST00000286428 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
VBP1-201ENST00000286428 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
VBP1-201ENST00000286428 LINC01558Q9Y6Z2 57 aa9.93□□□□□ -0.82
VBP1-201ENST00000286428 COX6B2Q6YFQ2 88 aa9.92□□□□□ -0.82
VBP1-201ENST00000286428 SPTSSBQ8NFR3 76 aa9.92□□□□□ -0.82
VBP1-201ENST00000286428 BIRC6Q9NR09 4857 aa9.92□□□□□ -0.82
VBP1-201ENST00000286428 PSPHP1O15172 72 aa9.86□□□□□ -0.83
VBP1-201ENST00000286428 BRK1Q8WUW1 75 aa9.86□□□□□ -0.83
VBP1-201ENST00000286428 PRR15LQ9BU68 103 aa9.85□□□□□ -0.83
VBP1-201ENST00000286428 HERC2O95714 4834 aa9.83□□□□□ -0.84
VBP1-201ENST00000286428 SEC61BP60468 96 aaKnown RBP9.82□□□□□ -0.84
VBP1-201ENST00000286428 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
VBP1-201ENST00000286428 Q5VV11 94 aa9.77□□□□□ -0.85
VBP1-201ENST00000286428 ABCA13Q86UQ4 5058 aa9.75□□□□□ -0.85
VBP1-201ENST00000286428 A0A1B0GU69 56 aa9.74□□□□□ -0.85
VBP1-201ENST00000286428 RBM12B-AS1Q9P1G2 102 aa9.72□□□□□ -0.85
VBP1-201ENST00000286428 SEC61GP60059 68 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms