RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 SIGMAR1Q99720 223 aa9.49□□□□□ -0.89
ATG3-201ENST00000283290 IGKV4-1P06312 121 aa9.48□□□□□ -0.89
ATG3-201ENST00000283290 LINC00472Q9H8W2 130 aa9.47□□□□□ -0.89
ATG3-201ENST00000283290 LINC00643Q86TS7 51 aa9.45□□□□□ -0.9
ATG3-201ENST00000283290 UBL5Q9BZL1 73 aa9.45□□□□□ -0.9
ATG3-201ENST00000283290 DSCR10P59022 87 aa9.42□□□□□ -0.9
ATG3-201ENST00000283290 Q6ZVQ6 151 aa9.42□□□□□ -0.9
ATG3-201ENST00000283290 MT-ATP8P03928 68 aa9.41□□□□□ -0.9
ATG3-201ENST00000283290 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
ATG3-201ENST00000283290 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
ATG3-201ENST00000283290 NREPQ16612 68 aa9.38□□□□□ -0.91
ATG3-201ENST00000283290 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
ATG3-201ENST00000283290 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
ATG3-201ENST00000283290 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
ATG3-201ENST00000283290 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
ATG3-201ENST00000283290 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
ATG3-201ENST00000283290 RPL37P61927 97 aaKnown RBP9.33□□□□□ -0.92
ATG3-201ENST00000283290 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
ATG3-201ENST00000283290 LINC00313P59037 77 aa9.31□□□□□ -0.92
ATG3-201ENST00000283290 CXCL6P80162 114 aa9.31□□□□□ -0.92
ATG3-201ENST00000283290 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
ATG3-201ENST00000283290 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
ATG3-201ENST00000283290 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
ATG3-201ENST00000283290 J3KT08 172 aa9.28□□□□□ -0.92
ATG3-201ENST00000283290 BPY2O14599 106 aa9.28□□□□□ -0.92
ATG3-201ENST00000283290 A0A0U1RQV1 116 aa9.25□□□□□ -0.93
ATG3-201ENST00000283290 A8MWP4 228 aa9.24□□□□□ -0.93
ATG3-201ENST00000283290 Q75L30 129 aa9.24□□□□□ -0.93
ATG3-201ENST00000283290 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
ATG3-201ENST00000283290 A8MUU9 505 aa9.22□□□□□ -0.93
ATG3-201ENST00000283290 K7EQZ3 153 aa9.22□□□□□ -0.93
ATG3-201ENST00000283290 NDUFB1O75438 58 aa9.22□□□□□ -0.93
ATG3-201ENST00000283290 Q8N9L7 120 aa9.22□□□□□ -0.93
ATG3-201ENST00000283290 HIST1H4AP62805 103 aaKnown RBP9.21□□□□□ -0.93
ATG3-201ENST00000283290 C8orf17Q9NRJ1 99 aa9.2□□□□□ -0.94
ATG3-201ENST00000283290 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
ATG3-201ENST00000283290 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
ATG3-201ENST00000283290 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
ATG3-201ENST00000283290 PRR15Q8IV56 129 aa9.19□□□□□ -0.94
ATG3-201ENST00000283290 A0A087WVE0 104 aa9.18□□□□□ -0.94
ATG3-201ENST00000283290 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.95
ATG3-201ENST00000283290 FAM236AA0A1B0GUQ0 79 aa9.12□□□□□ -0.95
ATG3-201ENST00000283290 FAM236BA0A1B0GV22 79 aa9.12□□□□□ -0.95
ATG3-201ENST00000283290 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
ATG3-201ENST00000283290 WFDC13Q8IUB5 93 aa9.09□□□□□ -0.95
ATG3-201ENST00000283290 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
ATG3-201ENST00000283290 Q8N9P0 234 aaPredicted RBP9.06□□□□□ -0.96
ATG3-201ENST00000283290 KRTAP19-2Q3LHN2 52 aa9.04□□□□□ -0.96
ATG3-201ENST00000283290 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
ATG3-201ENST00000283290 HCG22E2RYF7 251 aa9.03□□□□□ -0.96
ATG3-201ENST00000283290 TMEM254Q8TBM7 123 aa9.03□□□□□ -0.96
ATG3-201ENST00000283290 NDUFS5O43920 106 aa9.02□□□□□ -0.97
ATG3-201ENST00000283290 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
ATG3-201ENST00000283290 ATOX1O00244 68 aa9.01□□□□□ -0.97
ATG3-201ENST00000283290 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
ATG3-201ENST00000283290 ZCCHC13Q8WW36 166 aaKnown RBP9.01□□□□□ -0.97
ATG3-201ENST00000283290 ANAPC13Q9BS18 74 aa8.97□□□□□ -0.97
ATG3-201ENST00000283290 PCP4P48539 62 aa8.95□□□□□ -0.98
ATG3-201ENST00000283290 SMIM20Q8N5G0 67 aa8.92□□□□□ -0.98
ATG3-201ENST00000283290 Q5W150 140 aa8.91□□□□□ -0.98
ATG3-201ENST00000283290 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
ATG3-201ENST00000283290 OCR1Q9BZK8 76 aa8.9□□□□□ -0.98
ATG3-201ENST00000283290 SERP2Q8N6R1 65 aa8.9□□□□□ -0.99
ATG3-201ENST00000283290 TRAV7A0A075B6U4 112 aa8.89□□□□□ -0.99
ATG3-201ENST00000283290 MT1HP80294 61 aa8.89□□□□□ -0.99
ATG3-201ENST00000283290 SPINK7P58062 85 aa8.88□□□□□ -0.99
ATG3-201ENST00000283290 HRES1P13985 223 aa8.87□□□□□ -0.99
ATG3-201ENST00000283290 COX7CP15954 63 aa8.86□□□□□ -0.99
ATG3-201ENST00000283290 FLGP20930 4061 aaPredicted RBP8.85□□□□□ -0.99
ATG3-201ENST00000283290 UQCRQO14949 82 aa8.82□□□□□ -1
ATG3-201ENST00000283290 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
ATG3-201ENST00000283290 IGKV2-30P06310 120 aa8.8□□□□□ -1
ATG3-201ENST00000283290 TP53AIP1Q9HCN2 124 aa8.79□□□□□ -1
ATG3-201ENST00000283290 CCDC179H3BU77 68 aa8.78□□□□□ -1
ATG3-201ENST00000283290 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
ATG3-201ENST00000283290 FAM236CP0DP71 79 aa8.78□□□□□ -1
ATG3-201ENST00000283290 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
ATG3-201ENST00000283290 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
ATG3-201ENST00000283290 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
ATG3-201ENST00000283290 M0R2T5 61 aa8.73□□□□□ -1.01
ATG3-201ENST00000283290 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
ATG3-201ENST00000283290 TRAV22A0A0B4J277 110 aa8.7□□□□□ -1.02
ATG3-201ENST00000283290 C7orf65Q6ZTY9 151 aa8.7□□□□□ -1.02
ATG3-201ENST00000283290 H0Y9P7 68 aa8.69□□□□□ -1.02
ATG3-201ENST00000283290 MP68P56378 58 aa8.69□□□□□ -1.02
ATG3-201ENST00000283290 KRTAP10-6P60371 365 aaPredicted RBP8.68□□□□□ -1.02
ATG3-201ENST00000283290 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
ATG3-201ENST00000283290 SNURFQ9Y675 71 aa8.66□□□□□ -1.02
ATG3-201ENST00000283290 H3BPC8 53 aa8.65□□□□□ -1.02
ATG3-201ENST00000283290 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
ATG3-201ENST00000283290 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
ATG3-201ENST00000283290 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
ATG3-201ENST00000283290 C4orf26Q17RF5 130 aa8.63□□□□□ -1.03
ATG3-201ENST00000283290 LINC00208Q96KT6 92 aa8.63□□□□□ -1.03
ATG3-201ENST00000283290 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
ATG3-201ENST00000283290 NDUFC1O43677 76 aa8.56□□□□□ -1.04
ATG3-201ENST00000283290 LOC101927531A0A1B0GV80 90 aa8.56□□□□□ -1.04
ATG3-201ENST00000283290 H7BZZ5 65 aa8.55□□□□□ -1.04
ATG3-201ENST00000283290 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
ATG3-201ENST00000283290 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms