RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 PRR26Q8N8Z3 221 aa8.68□□□□□ -1.02
TNFRSF11A-201ENST00000269485 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.03
TNFRSF11A-201ENST00000269485 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.03
TNFRSF11A-201ENST00000269485 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
TNFRSF11A-201ENST00000269485 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF11A-201ENST00000269485 DNAH3Q8TD57 4116 aa8.63□□□□□ -1.03
TNFRSF11A-201ENST00000269485 KRTAP4-16G5E9R7 235 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF11A-201ENST00000269485 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
TNFRSF11A-201ENST00000269485 LCE6AA0A183 80 aa8.59□□□□□ -1.03
TNFRSF11A-201ENST00000269485 SPRR1AP35321 89 aa8.59□□□□□ -1.03
TNFRSF11A-201ENST00000269485 KRTAP10-1P60331 282 aa8.58□□□□□ -1.04
TNFRSF11A-201ENST00000269485 A0A1B0GW54 56 aa8.58□□□□□ -1.04
TNFRSF11A-201ENST00000269485 H3BPC8 53 aa8.58□□□□□ -1.04
TNFRSF11A-201ENST00000269485 A0A1B0GU69 56 aa8.56□□□□□ -1.04
TNFRSF11A-201ENST00000269485 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
TNFRSF11A-201ENST00000269485 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
TNFRSF11A-201ENST00000269485 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
TNFRSF11A-201ENST00000269485 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
TNFRSF11A-201ENST00000269485 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
TNFRSF11A-201ENST00000269485 ZNF861PO60384 105 aa8.53□□□□□ -1.04
TNFRSF11A-201ENST00000269485 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
TNFRSF11A-201ENST00000269485 Q6ZR54 194 aa8.53□□□□□ -1.04
TNFRSF11A-201ENST00000269485 A8MWP4 228 aa8.52□□□□□ -1.05
TNFRSF11A-201ENST00000269485 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
TNFRSF11A-201ENST00000269485 DNAH1Q9P2D7 4330 aa8.5□□□□□ -1.05
TNFRSF11A-201ENST00000269485 HRES1P13985 223 aa8.5□□□□□ -1.05
TNFRSF11A-201ENST00000269485 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
TNFRSF11A-201ENST00000269485 SPINK1P00995 79 aa8.47□□□□□ -1.05
TNFRSF11A-201ENST00000269485 A0A087X002 238 aa8.46□□□□□ -1.06
TNFRSF11A-201ENST00000269485 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
TNFRSF11A-201ENST00000269485 NOTCH2NLQ7Z3S9 236 aa8.46□□□□□ -1.06
TNFRSF11A-201ENST00000269485 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
TNFRSF11A-201ENST00000269485 VPS13DQ5THJ4 4388 aa8.44□□□□□ -1.06
TNFRSF11A-201ENST00000269485 FRAS1Q86XX4 4008 aa8.44□□□□□ -1.06
TNFRSF11A-201ENST00000269485 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
TNFRSF11A-201ENST00000269485 IGKV2-30P06310 120 aa8.43□□□□□ -1.06
TNFRSF11A-201ENST00000269485 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
TNFRSF11A-201ENST00000269485 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
TNFRSF11A-201ENST00000269485 ACYP2P14621 99 aa8.41□□□□□ -1.06
TNFRSF11A-201ENST00000269485 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.06
TNFRSF11A-201ENST00000269485 HYDINQ4G0P3 5121 aa8.4□□□□□ -1.07
TNFRSF11A-201ENST00000269485 UQCR11O14957 56 aa8.38□□□□□ -1.07
TNFRSF11A-201ENST00000269485 DNAH2Q9P225 4427 aa8.38□□□□□ -1.07
TNFRSF11A-201ENST00000269485 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
TNFRSF11A-201ENST00000269485 DNAH6Q9C0G6 4158 aa8.37□□□□□ -1.07
TNFRSF11A-201ENST00000269485 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
TNFRSF11A-201ENST00000269485 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
TNFRSF11A-201ENST00000269485 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
TNFRSF11A-201ENST00000269485 FAT1Q14517 4588 aa8.34□□□□□ -1.07
TNFRSF11A-201ENST00000269485 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.08
TNFRSF11A-201ENST00000269485 Q96NJ1 140 aa8.31□□□□□ -1.08
TNFRSF11A-201ENST00000269485 MRPL34Q9BQ48 92 aaKnown RBP8.31□□□□□ -1.08
TNFRSF11A-201ENST00000269485 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
TNFRSF11A-201ENST00000269485 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.08
TNFRSF11A-201ENST00000269485 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
TNFRSF11A-201ENST00000269485 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
TNFRSF11A-201ENST00000269485 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
TNFRSF11A-201ENST00000269485 SSBP3-AS1Q7Z2R9 100 aa8.22□□□□□ -1.09
TNFRSF11A-201ENST00000269485 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
TNFRSF11A-201ENST00000269485 SPRR1BP22528 89 aa8.21□□□□□ -1.1
TNFRSF11A-201ENST00000269485 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.1
TNFRSF11A-201ENST00000269485 Q8N1X5 172 aa8.18□□□□□ -1.1
TNFRSF11A-201ENST00000269485 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
TNFRSF11A-201ENST00000269485 LINC00304Q8N9R0 145 aa8.17□□□□□ -1.1
TNFRSF11A-201ENST00000269485 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
TNFRSF11A-201ENST00000269485 Q5W150 140 aa8.17□□□□□ -1.1
TNFRSF11A-201ENST00000269485 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
TNFRSF11A-201ENST00000269485 KMT2CQ8NEZ4 4911 aaKnown RBP8.17□□□□□ -1.1
TNFRSF11A-201ENST00000269485 MYCBP2O75592 4640 aa8.17□□□□□ -1.1
TNFRSF11A-201ENST00000269485 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
TNFRSF11A-201ENST00000269485 SPATA8Q6RVD6 105 aa8.13□□□□□ -1.11
TNFRSF11A-201ENST00000269485 FAM229AH3BQW9 127 aa8.12□□□□□ -1.11
TNFRSF11A-201ENST00000269485 LINC00483Q53H64 154 aa8.1□□□□□ -1.11
TNFRSF11A-201ENST00000269485 K7ERS5 55 aa8.09□□□□□ -1.11
TNFRSF11A-201ENST00000269485 ROMO1P60602 79 aa8.07□□□□□ -1.12
TNFRSF11A-201ENST00000269485 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
TNFRSF11A-201ENST00000269485 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
TNFRSF11A-201ENST00000269485 KRTAP21-3Q3LHN1 58 aa8.04□□□□□ -1.12
TNFRSF11A-201ENST00000269485 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
TNFRSF11A-201ENST00000269485 Q6ZSA8 131 aa8.03□□□□□ -1.12
TNFRSF11A-201ENST00000269485 Q5VSD8 79 aa8.02□□□□□ -1.12
TNFRSF11A-201ENST00000269485 KIAA1109Q2LD37 5005 aa8.02□□□□□ -1.13
TNFRSF11A-201ENST00000269485 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
TNFRSF11A-201ENST00000269485 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
TNFRSF11A-201ENST00000269485 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
TNFRSF11A-201ENST00000269485 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
TNFRSF11A-201ENST00000269485 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
TNFRSF11A-201ENST00000269485 KRTAP25-1Q3LHN0 102 aa7.97□□□□□ -1.13
TNFRSF11A-201ENST00000269485 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
TNFRSF11A-201ENST00000269485 A8MUU9 505 aa7.9□□□□□ -1.15
TNFRSF11A-201ENST00000269485 NDUFAF8A1L188 74 aa7.89□□□□□ -1.15
TNFRSF11A-201ENST00000269485 RYR1P21817 5038 aa7.86□□□□□ -1.15
TNFRSF11A-201ENST00000269485 RYR3Q15413 4870 aa7.85□□□□□ -1.15
TNFRSF11A-201ENST00000269485 ALMS1Q8TCU4 4167 aa7.85□□□□□ -1.15
TNFRSF11A-201ENST00000269485 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
TNFRSF11A-201ENST00000269485 A0A1B0GU33 70 aa7.84□□□□□ -1.15
TNFRSF11A-201ENST00000269485 A0A1B0GVY2 172 aa7.83□□□□□ -1.16
TNFRSF11A-201ENST00000269485 PKD1P98161 4303 aa7.83□□□□□ -1.16
TNFRSF11A-201ENST00000269485 A0A0D9SG42 100 aa7.82□□□□□ -1.16
TNFRSF11A-201ENST00000269485 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 664.5 ms